EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000001653 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 8613 bases
Position: chr21:28718946-28727558
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000000491	THUMP	PF02926.17	7e-14	1	1
ENSPPAP00000000488	THUMP	PF02926.17	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000002132	-	1074	-	ENSPPAP00000000488	357 (aa)	-	A0A2R8Z6S1
ENSPPAT00000002135	-	897	-	ENSPPAP00000000491	298 (aa)	-	A0A2R8ZD05
ENSPPAT00000001915	-	429	-	ENSPPAP00000000441	142 (aa)	-	A0A2R8ZCV3

Gene Model

Click here to download ENSPPAG00000001653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000001653's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000001653	-	96	81.877	ENSPPAG00000033818	-	83	76.374

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000001653	-	96	82.524	ENSG00000066654	THUMPD1	96	76.401	Homo_sapiens
ENSPPAG00000001653	-	68	52.609	ENSAPOG00000008440	thumpd1	75	53.778	Acanthochromis_polyacanthus
ENSPPAG00000001653	-	96	75.796	ENSAMEG00000006257	THUMPD1	95	70.058	Ailuropoda_melanoleuca
ENSPPAG00000001653	-	72	51.055	ENSACIG00000024395	thumpd1	71	51.055	Amphilophus_citrinellus
ENSPPAG00000001653	-	68	52.174	ENSAOCG00000003509	thumpd1	70	53.478	Amphiprion_ocellaris
ENSPPAG00000001653	-	68	52.174	ENSAPEG00000010515	thumpd1	71	53.478	Amphiprion_percula
ENSPPAG00000001653	-	84	47.794	ENSATEG00000004737	thumpd1	86	47.794	Anabas_testudineus
ENSPPAG00000001653	-	71	65.254	ENSAPLG00000015259	THUMPD1	84	65.833	Anas_platyrhynchos
ENSPPAG00000001653	-	71	60.417	ENSACAG00000009625	-	75	62.500	Anolis_carolinensis
ENSPPAG00000001653	-	96	66.775	ENSANAG00000027040	-	95	61.721	Aotus_nancymaae
ENSPPAG00000001653	-	96	66.890	ENSANAG00000027311	-	97	61.702	Aotus_nancymaae
ENSPPAG00000001653	-	96	80.906	ENSANAG00000026882	-	96	74.926	Aotus_nancymaae
ENSPPAG00000001653	-	68	51.304	ENSACLG00000004830	thumpd1	71	52.609	Astatotilapia_calliptera
ENSPPAG00000001653	-	84	48.727	ENSAMXG00000012356	thumpd1	83	48.727	Astyanax_mexicanus
ENSPPAG00000001653	-	96	76.038	ENSBTAG00000047673	THUMPD1	96	69.679	Bos_taurus
ENSPPAG00000001653	-	96	80.906	ENSCJAG00000009499	THUMPD1	96	74.926	Callithrix_jacchus
ENSPPAG00000001653	-	96	75.399	ENSCAFG00000017985	THUMPD1	95	69.679	Canis_familiaris
ENSPPAG00000001653	-	96	75.399	ENSCAFG00020021861	THUMPD1	95	69.679	Canis_lupus_dingo
ENSPPAG00000001653	-	96	75.080	ENSCHIG00000010134	THUMPD1	96	68.805	Capra_hircus
ENSPPAG00000001653	-	96	74.516	ENSTSYG00000011537	THUMPD1	96	69.118	Carlito_syrichta
ENSPPAG00000001653	-	96	69.775	ENSCPOG00000023684	-	96	64.809	Cavia_porcellus
ENSPPAG00000001653	-	96	69.775	ENSCPOG00000008919	-	96	64.809	Cavia_porcellus
ENSPPAG00000001653	-	96	74.434	ENSCCAG00000019379	-	96	64.484	Cebus_capucinus
ENSPPAG00000001653	-	96	81.553	ENSCCAG00000030205	THUMPD1	96	74.926	Cebus_capucinus
ENSPPAG00000001653	-	96	76.623	ENSCATG00000020844	-	96	70.659	Cercocebus_atys
ENSPPAG00000001653	-	96	82.201	ENSCATG00000040309	THUMPD1	96	76.106	Cercocebus_atys
ENSPPAG00000001653	-	96	71.935	ENSCLAG00000016508	THUMPD1	96	66.176	Chinchilla_lanigera
ENSPPAG00000001653	-	96	82.143	ENSCSAG00000007610	THUMPD1	96	76.036	Chlorocebus_sabaeus
ENSPPAG00000001653	-	96	63.259	ENSCSAG00000009860	-	83	59.730	Chlorocebus_sabaeus
ENSPPAG00000001653	-	96	71.975	ENSCHOG00000005587	THUMPD1	96	66.279	Choloepus_hoffmanni
ENSPPAG00000001653	-	77	66.929	ENSCPBG00000019055	THUMPD1	72	66.929	Chrysemys_picta_bellii
ENSPPAG00000001653	-	96	78.878	ENSCANG00000035822	-	100	78.878	Colobus_angolensis_palliatus
ENSPPAG00000001653	-	95	74.510	ENSCANG00000038770	THUMPD1	100	74.510	Colobus_angolensis_palliatus
ENSPPAG00000001653	-	96	70.323	ENSCGRG00001014829	Thumpd1	96	64.307	Cricetulus_griseus_chok1gshd
ENSPPAG00000001653	-	96	70.323	ENSCGRG00000000060	Thumpd1	96	64.307	Cricetulus_griseus_crigri
ENSPPAG00000001653	-	70	51.948	ENSCSEG00000002041	thumpd1	85	44.485	Cynoglossus_semilaevis
ENSPPAG00000001653	-	79	50.579	ENSCVAG00000014960	thumpd1	80	49.254	Cyprinodon_variegatus
ENSPPAG00000001653	-	94	41.667	ENSDARG00000100264	thumpd1	85	41.667	Danio_rerio
ENSPPAG00000001653	-	96	76.115	ENSDNOG00000043510	THUMPD1	96	70.640	Dasypus_novemcinctus
ENSPPAG00000001653	-	96	68.471	ENSDORG00000028216	Thumpd1	96	62.500	Dipodomys_ordii
ENSPPAG00000001653	-	96	64.103	ENSETEG00000002763	THUMPD1	81	58.480	Echinops_telfairi
ENSPPAG00000001653	-	72	37.652	ENSEBUG00000011011	THUMPD1	67	37.652	Eptatretus_burgeri
ENSPPAG00000001653	-	58	66.667	ENSEASG00005017428	-	100	66.667	Equus_asinus_asinus
ENSPPAG00000001653	-	96	74.038	ENSECAG00000005354	THUMPD1	96	68.129	Equus_caballus
ENSPPAG00000001653	-	96	71.160	ENSEEUG00000011256	THUMPD1	98	61.858	Erinaceus_europaeus
ENSPPAG00000001653	-	68	54.222	ENSELUG00000013612	thumpd1	53	55.752	Esox_lucius
ENSPPAG00000001653	-	96	75.478	ENSFCAG00000039296	THUMPD1	96	69.767	Felis_catus
ENSPPAG00000001653	-	69	64.035	ENSFALG00000014029	THUMPD1	95	58.868	Ficedula_albicollis
ENSPPAG00000001653	-	79	48.837	ENSFHEG00000013319	thumpd1	79	47.122	Fundulus_heteroclitus
ENSPPAG00000001653	-	83	49.091	ENSGMOG00000003369	thumpd1	85	49.091	Gadus_morhua
ENSPPAG00000001653	-	51	55.491	ENSGALG00000031384	-	79	55.491	Gallus_gallus
ENSPPAG00000001653	-	90	45.205	ENSGAFG00000011000	thumpd1	88	45.548	Gambusia_affinis
ENSPPAG00000001653	-	84	46.403	ENSGACG00000019511	thumpd1	85	46.403	Gasterosteus_aculeatus
ENSPPAG00000001653	-	69	69.737	ENSGAGG00000008225	THUMPD1	71	69.737	Gopherus_agassizii
ENSPPAG00000001653	-	98	85.666	ENSGGOG00000043232	-	95	87.919	Gorilla_gorilla
ENSPPAG00000001653	-	96	81.877	ENSGGOG00000005231	-	83	76.923	Gorilla_gorilla
ENSPPAG00000001653	-	68	51.304	ENSHBUG00000017996	thumpd1	71	52.174	Haplochromis_burtoni
ENSPPAG00000001653	-	96	72.669	ENSHGLG00000011001	-	96	66.862	Heterocephalus_glaber_female
ENSPPAG00000001653	-	63	58.491	ENSHGLG00000000952	-	99	58.491	Heterocephalus_glaber_female
ENSPPAG00000001653	-	63	58.491	ENSHGLG00100010577	-	99	58.491	Heterocephalus_glaber_male
ENSPPAG00000001653	-	96	73.312	ENSHGLG00100016023	THUMPD1	96	67.449	Heterocephalus_glaber_male
ENSPPAG00000001653	-	68	53.365	ENSHCOG00000008618	thumpd1	73	41.640	Hippocampus_comes
ENSPPAG00000001653	-	78	48.016	ENSIPUG00000012500	thumpd1	59	48.016	Ictalurus_punctatus
ENSPPAG00000001653	-	96	74.839	ENSSTOG00000007011	THUMPD1	96	69.118	Ictidomys_tridecemlineatus
ENSPPAG00000001653	-	96	69.355	ENSJJAG00000004295	-	96	64.412	Jaculus_jaculus
ENSPPAG00000001653	-	72	43.515	ENSKMAG00000009545	thumpd1	71	39.726	Kryptolebias_marmoratus
ENSPPAG00000001653	-	68	54.867	ENSLBEG00000009349	thumpd1	77	48.207	Labrus_bergylta
ENSPPAG00000001653	-	69	58.431	ENSLACG00000005833	THUMPD1	70	58.431	Latimeria_chalumnae
ENSPPAG00000001653	-	77	50.741	ENSLOCG00000000854	thumpd1	86	51.481	Lepisosteus_oculatus
ENSPPAG00000001653	-	96	70.701	ENSLAFG00000025838	THUMPD1	96	65.116	Loxodonta_africana
ENSPPAG00000001653	-	96	77.049	ENSMFAG00000041474	-	100	77.049	Macaca_fascicularis
ENSPPAG00000001653	-	96	82.201	ENSMFAG00000036996	THUMPD1	96	76.106	Macaca_fascicularis
ENSPPAG00000001653	-	96	76.471	ENSMMUG00000038414	-	100	76.471	Macaca_mulatta
ENSPPAG00000001653	-	96	82.201	ENSMMUG00000004225	THUMPD1	96	76.106	Macaca_mulatta
ENSPPAG00000001653	-	96	76.393	ENSMNEG00000038856	-	100	76.393	Macaca_nemestrina
ENSPPAG00000001653	-	96	82.201	ENSMNEG00000020726	THUMPD1	96	76.106	Macaca_nemestrina
ENSPPAG00000001653	-	96	82.201	ENSMLEG00000036436	THUMPD1	96	76.106	Mandrillus_leucophaeus
ENSPPAG00000001653	-	95	76.898	ENSMLEG00000030012	-	99	76.898	Mandrillus_leucophaeus
ENSPPAG00000001653	-	72	52.340	ENSMAMG00000006858	thumpd1	71	52.340	Mastacembelus_armatus
ENSPPAG00000001653	-	68	51.304	ENSMZEG00005013693	thumpd1	71	52.174	Maylandia_zebra
ENSPPAG00000001653	-	55	66.667	ENSMGAG00000010340	THUMPD1	90	66.667	Meleagris_gallopavo
ENSPPAG00000001653	-	96	70.968	ENSMAUG00000013306	Thumpd1	96	64.602	Mesocricetus_auratus
ENSPPAG00000001653	-	90	72.727	ENSMICG00000030865	-	85	72.727	Microcebus_murinus
ENSPPAG00000001653	-	96	78.387	ENSMICG00000038483	-	96	72.353	Microcebus_murinus
ENSPPAG00000001653	-	96	72.026	ENSMOCG00000003447	Thumpd1	96	65.882	Microtus_ochrogaster
ENSPPAG00000001653	-	68	53.275	ENSMMOG00000011323	thumpd1	67	53.275	Mola_mola
ENSPPAG00000001653	-	96	62.696	ENSMODG00000006971	-	95	58.405	Monodelphis_domestica
ENSPPAG00000001653	-	96	62.382	ENSMODG00000024776	-	96	58.120	Monodelphis_domestica
ENSPPAG00000001653	-	68	53.778	ENSMALG00000019522	thumpd1	81	48.846	Monopterus_albus
ENSPPAG00000001653	-	96	69.903	MGP_CAROLIEiJ_G0030382	Thumpd1	96	63.314	Mus_caroli
ENSPPAG00000001653	-	96	71.197	ENSMUSG00000030942	Thumpd1	96	64.497	Mus_musculus
ENSPPAG00000001653	-	96	70.096	MGP_PahariEiJ_G0013593	Thumpd1	96	63.529	Mus_pahari
ENSPPAG00000001653	-	96	71.795	ENSMLUG00000010547	THUMPD1	88	71.795	Myotis_lucifugus
ENSPPAG00000001653	-	96	72.816	ENSNGAG00000018643	Thumpd1	96	66.667	Nannospalax_galili
ENSPPAG00000001653	-	78	48.062	ENSNBRG00000006987	thumpd1	72	48.837	Neolamprologus_brichardi
ENSPPAG00000001653	-	96	81.877	ENSNLEG00000012369	THUMPD1	96	75.516	Nomascus_leucogenys
ENSPPAG00000001653	-	96	55.161	ENSOPRG00000011342	THUMPD1	83	50.000	Ochotona_princeps
ENSPPAG00000001653	-	96	70.740	ENSODEG00000012360	THUMPD1	96	65.103	Octodon_degus
ENSPPAG00000001653	-	78	48.062	ENSONIG00000000146	thumpd1	86	48.837	Oreochromis_niloticus
ENSPPAG00000001653	-	96	59.062	ENSOANG00000014297	THUMPD1	90	59.062	Ornithorhynchus_anatinus
ENSPPAG00000001653	-	66	64.352	ENSOCUG00000025354	-	99	64.352	Oryctolagus_cuniculus
ENSPPAG00000001653	-	96	72.492	ENSOCUG00000009895	-	96	66.962	Oryctolagus_cuniculus
ENSPPAG00000001653	-	68	53.333	ENSORLG00000027557	thumpd1	73	53.333	Oryzias_latipes
ENSPPAG00000001653	-	68	52.889	ENSORLG00020010206	thumpd1	72	52.889	Oryzias_latipes_hni
ENSPPAG00000001653	-	68	52.889	ENSORLG00015009581	thumpd1	87	47.445	Oryzias_latipes_hsok
ENSPPAG00000001653	-	68	53.778	ENSOMEG00000019361	thumpd1	68	53.778	Oryzias_melastigma
ENSPPAG00000001653	-	95	75.570	ENSOGAG00000026723	THUMPD1	95	69.436	Otolemur_garnettii
ENSPPAG00000001653	-	96	75.399	ENSOARG00000013107	THUMPD1	96	69.096	Ovis_aries
ENSPPAG00000001653	-	96	76.752	ENSPPRG00000014118	-	96	70.930	Panthera_pardus
ENSPPAG00000001653	-	96	75.478	ENSPTIG00000013856	-	96	70.349	Panthera_tigris_altaica
ENSPPAG00000001653	-	98	94.881	ENSPTRG00000046073	-	95	94.881	Pan_troglodytes
ENSPPAG00000001653	-	96	81.553	ENSPTRG00000007848	THUMPD1	83	76.099	Pan_troglodytes
ENSPPAG00000001653	-	96	81.877	ENSPANG00000025507	THUMPD1	96	75.811	Papio_anubis
ENSPPAG00000001653	-	96	76.974	ENSPANG00000034881	-	99	76.974	Papio_anubis
ENSPPAG00000001653	-	68	58.222	ENSPKIG00000014491	thumpd1	69	58.222	Paramormyrops_kingsleyae
ENSPPAG00000001653	-	69	69.737	ENSPSIG00000012430	THUMPD1	79	69.737	Pelodiscus_sinensis
ENSPPAG00000001653	-	68	50.877	ENSPMGG00000014479	thumpd1	80	51.316	Periophthalmus_magnuspinnatus
ENSPPAG00000001653	-	71	50.644	ENSPEMG00000002608	-	100	50.644	Peromyscus_maniculatus_bairdii
ENSPPAG00000001653	-	66	40.183	ENSPMAG00000001389	thumpd1	85	43.575	Petromyzon_marinus
ENSPPAG00000001653	-	96	62.382	ENSPCIG00000029241	THUMPD1	69	57.835	Phascolarctos_cinereus
ENSPPAG00000001653	-	85	47.350	ENSPFOG00000012649	thumpd1	86	47.826	Poecilia_formosa
ENSPPAG00000001653	-	90	45.392	ENSPLAG00000000137	thumpd1	88	45.734	Poecilia_latipinna
ENSPPAG00000001653	-	85	47.518	ENSPMEG00000007750	thumpd1	86	48.000	Poecilia_mexicana
ENSPPAG00000001653	-	71	52.137	ENSPREG00000000144	thumpd1	79	52.564	Poecilia_reticulata
ENSPPAG00000001653	-	85	80.797	ENSPPYG00000007160	-	100	80.797	Pongo_abelii
ENSPPAG00000001653	-	85	67.021	ENSPCAG00000001534	THUMPD1	100	67.021	Procavia_capensis
ENSPPAG00000001653	-	96	78.387	ENSPCOG00000024663	THUMPD1	96	72.059	Propithecus_coquereli
ENSPPAG00000001653	-	65	59.641	ENSPVAG00000003286	-	99	59.641	Pteropus_vampyrus
ENSPPAG00000001653	-	96	68.038	ENSPVAG00000005659	-	96	62.428	Pteropus_vampyrus
ENSPPAG00000001653	-	68	51.304	ENSPNYG00000007061	thumpd1	70	52.174	Pundamilia_nyererei
ENSPPAG00000001653	-	85	48.913	ENSPNAG00000024872	thumpd1	84	51.880	Pygocentrus_nattereri
ENSPPAG00000001653	-	66	64.384	ENSRNOG00000014946	AABR07005588.1	99	64.384	Rattus_norvegicus
ENSPPAG00000001653	-	96	78.218	ENSRBIG00000040136	-	100	78.218	Rhinopithecus_bieti
ENSPPAG00000001653	-	96	81.877	ENSRBIG00000040752	THUMPD1	96	75.811	Rhinopithecus_bieti
ENSPPAG00000001653	-	96	81.877	ENSRROG00000042189	THUMPD1	96	75.811	Rhinopithecus_roxellana
ENSPPAG00000001653	-	96	78.218	ENSRROG00000045699	-	100	78.218	Rhinopithecus_roxellana
ENSPPAG00000001653	-	96	80.906	ENSSBOG00000034246	THUMPD1	96	74.631	Saimiri_boliviensis_boliviensis
ENSPPAG00000001653	-	96	62.928	ENSSHAG00000003853	THUMPD1	96	58.689	Sarcophilus_harrisii
ENSPPAG00000001653	-	77	46.512	ENSSFOG00015007512	thumpd1	96	37.003	Scleropages_formosus
ENSPPAG00000001653	-	68	52.889	ENSSMAG00000000723	thumpd1	69	52.889	Scophthalmus_maximus
ENSPPAG00000001653	-	84	45.848	ENSSDUG00000014502	thumpd1	86	46.931	Seriola_dumerili
ENSPPAG00000001653	-	84	45.848	ENSSLDG00000007694	thumpd1	86	46.931	Seriola_lalandi_dorsalis
ENSPPAG00000001653	-	93	56.811	ENSSPUG00000005096	THUMPD1	96	53.251	Sphenodon_punctatus
ENSPPAG00000001653	-	68	53.982	ENSSPAG00000006993	thumpd1	71	54.348	Stegastes_partitus
ENSPPAG00000001653	-	96	74.603	ENSSSCG00000024748	THUMPD1	96	68.696	Sus_scrofa
ENSPPAG00000001653	-	77	61.719	ENSTGUG00000009247	THUMPD1	93	62.891	Taeniopygia_guttata
ENSPPAG00000001653	-	71	51.915	ENSTRUG00000015656	thumpd1	73	52.340	Takifugu_rubripes
ENSPPAG00000001653	-	68	53.097	ENSTNIG00000001584	thumpd1	74	53.540	Tetraodon_nigroviridis
ENSPPAG00000001653	-	96	73.871	ENSTBEG00000005252	THUMPD1	92	67.935	Tupaia_belangeri
ENSPPAG00000001653	-	96	74.522	ENSTTRG00000016435	THUMPD1	96	68.605	Tursiops_truncatus
ENSPPAG00000001653	-	66	61.086	ENSUAMG00000005779	-	99	61.086	Ursus_americanus
ENSPPAG00000001653	-	96	73.482	ENSVPAG00000003422	THUMPD1	96	67.638	Vicugna_pacos
ENSPPAG00000001653	-	96	75.399	ENSVVUG00000023241	THUMPD1	95	69.679	Vulpes_vulpes
ENSPPAG00000001653	-	69	57.522	ENSXETG00000005539	thumpd1	78	57.522	Xenopus_tropicalis
ENSPPAG00000001653	-	79	48.249	ENSXMAG00000026052	thumpd1	88	45.205	Xiphophorus_maculatus