EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000003423 (Gene tree)
Gene ID: 100972294
Gene Symbol: URB1
Alias: -
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 79310 bases
Position: chr21:32061966-32141275
Accession: 100972294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000000788	Npa1	PF11707.8	6.2e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000003693	URB1-201	8369	XM_003824001	ENSPPAP00000000788	2271 (aa)	XP_003824049	A0A2R8Z7F6

Gene Model

Click here to download ENSPPAG00000003423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000003423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000003423	URB1	100	99.031	ENSG00000142207	URB1	100	99.031	Homo_sapiens
ENSPPAG00000003423	URB1	99	42.863	ENSAPOG00000020308	urb1	99	43.233	Acanthochromis_polyacanthus
ENSPPAG00000003423	URB1	100	82.438	ENSAMEG00000011998	URB1	99	82.482	Ailuropoda_melanoleuca
ENSPPAG00000003423	URB1	94	44.600	ENSACIG00000003248	urb1	96	44.620	Amphilophus_citrinellus
ENSPPAG00000003423	URB1	99	40.808	ENSAOCG00000010364	urb1	100	40.678	Amphiprion_ocellaris
ENSPPAG00000003423	URB1	97	53.319	ENSAPEG00000010758	urb1	99	53.319	Amphiprion_percula
ENSPPAG00000003423	URB1	99	43.328	ENSATEG00000011790	urb1	97	44.222	Anabas_testudineus
ENSPPAG00000003423	URB1	97	56.518	ENSAPLG00000012791	URB1	100	56.518	Anas_platyrhynchos
ENSPPAG00000003423	URB1	99	53.880	ENSACAG00000002817	URB1	98	53.826	Anolis_carolinensis
ENSPPAG00000003423	URB1	100	93.750	ENSANAG00000024617	URB1	100	93.750	Aotus_nancymaae
ENSPPAG00000003423	URB1	99	45.102	ENSACLG00000024865	urb1	99	44.934	Astatotilapia_calliptera
ENSPPAG00000003423	URB1	99	40.097	ENSAMXG00000012306	urb1	99	40.167	Astyanax_mexicanus
ENSPPAG00000003423	URB1	99	77.861	ENSBTAG00000012412	URB1	99	77.948	Bos_taurus
ENSPPAG00000003423	URB1	100	92.791	ENSCJAG00000009118	URB1	100	92.747	Callithrix_jacchus
ENSPPAG00000003423	URB1	100	82.624	ENSCAFG00000008892	URB1	100	82.624	Canis_familiaris
ENSPPAG00000003423	URB1	100	81.574	ENSCAFG00020025994	-	100	81.574	Canis_lupus_dingo
ENSPPAG00000003423	URB1	100	82.630	ENSCAFG00020025987	-	100	82.630	Canis_lupus_dingo
ENSPPAG00000003423	URB1	99	77.203	ENSCHIG00000015645	URB1	99	77.291	Capra_hircus
ENSPPAG00000003423	URB1	100	86.878	ENSTSYG00000013286	URB1	99	86.878	Carlito_syrichta
ENSPPAG00000003423	URB1	98	79.982	ENSCAPG00000015589	URB1	99	79.982	Cavia_aperea
ENSPPAG00000003423	URB1	99	81.162	ENSCPOG00000006748	URB1	99	81.162	Cavia_porcellus
ENSPPAG00000003423	URB1	100	93.879	ENSCCAG00000021299	URB1	100	93.879	Cebus_capucinus
ENSPPAG00000003423	URB1	100	95.641	ENSCATG00000042630	URB1	100	95.641	Cercocebus_atys
ENSPPAG00000003423	URB1	100	81.363	ENSCLAG00000005262	URB1	100	81.363	Chinchilla_lanigera
ENSPPAG00000003423	URB1	100	93.994	ENSCSAG00000009584	URB1	100	93.994	Chlorocebus_sabaeus
ENSPPAG00000003423	URB1	99	59.423	ENSCPBG00000006454	URB1	99	59.371	Chrysemys_picta_bellii
ENSPPAG00000003423	URB1	100	95.861	ENSCANG00000031088	URB1	100	95.861	Colobus_angolensis_palliatus
ENSPPAG00000003423	URB1	99	77.575	ENSCGRG00001010616	Urb1	99	77.333	Cricetulus_griseus_chok1gshd
ENSPPAG00000003423	URB1	98	77.138	ENSCGRG00000015840	Urb1	99	77.138	Cricetulus_griseus_crigri
ENSPPAG00000003423	URB1	99	41.913	ENSCSEG00000012616	urb1	99	41.944	Cynoglossus_semilaevis
ENSPPAG00000003423	URB1	96	51.674	ENSCVAG00000009076	urb1	97	53.182	Cyprinodon_variegatus
ENSPPAG00000003423	URB1	99	43.146	ENSDARG00000060308	urb1	99	43.634	Danio_rerio
ENSPPAG00000003423	URB1	85	81.625	ENSDNOG00000015586	URB1	99	81.625	Dasypus_novemcinctus
ENSPPAG00000003423	URB1	100	81.426	ENSDORG00000006735	Urb1	100	81.426	Dipodomys_ordii
ENSPPAG00000003423	URB1	92	81.031	ENSETEG00000009080	URB1	92	81.031	Echinops_telfairi
ENSPPAG00000003423	URB1	100	82.438	ENSEASG00005007711	URB1	100	82.366	Equus_asinus_asinus
ENSPPAG00000003423	URB1	97	89.229	ENSECAG00000013206	URB1	100	89.052	Equus_caballus
ENSPPAG00000003423	URB1	58	85.833	ENSEEUG00000003626	-	57	85.833	Erinaceus_europaeus
ENSPPAG00000003423	URB1	99	44.887	ENSELUG00000020516	urb1	98	44.976	Esox_lucius
ENSPPAG00000003423	URB1	100	82.314	ENSFCAG00000002177	URB1	100	82.394	Felis_catus
ENSPPAG00000003423	URB1	98	51.637	ENSFALG00000004636	URB1	99	51.619	Ficedula_albicollis
ENSPPAG00000003423	URB1	100	81.343	ENSFDAG00000007288	URB1	95	81.343	Fukomys_damarensis
ENSPPAG00000003423	URB1	99	41.349	ENSFHEG00000000202	urb1	99	41.910	Fundulus_heteroclitus
ENSPPAG00000003423	URB1	93	47.524	ENSGMOG00000001838	urb1	94	47.441	Gadus_morhua
ENSPPAG00000003423	URB1	99	56.560	ENSGALG00000015887	URB1	99	56.583	Gallus_gallus
ENSPPAG00000003423	URB1	93	52.299	ENSGAFG00000020694	urb1	96	52.541	Gambusia_affinis
ENSPPAG00000003423	URB1	99	44.337	ENSGACG00000011703	urb1	99	44.337	Gasterosteus_aculeatus
ENSPPAG00000003423	URB1	99	58.698	ENSGAGG00000022544	URB1	99	58.646	Gopherus_agassizii
ENSPPAG00000003423	URB1	100	98.635	ENSGGOG00000000285	URB1	100	98.635	Gorilla_gorilla
ENSPPAG00000003423	URB1	99	45.146	ENSHBUG00000001904	urb1	99	44.978	Haplochromis_burtoni
ENSPPAG00000003423	URB1	99	79.887	ENSHGLG00000004907	URB1	99	79.887	Heterocephalus_glaber_female
ENSPPAG00000003423	URB1	99	80.632	ENSHGLG00100010749	URB1	99	80.632	Heterocephalus_glaber_male
ENSPPAG00000003423	URB1	74	47.647	ENSHCOG00000018683	urb1	97	48.039	Hippocampus_comes
ENSPPAG00000003423	URB1	99	40.929	ENSIPUG00000014721	urb1	99	41.017	Ictalurus_punctatus
ENSPPAG00000003423	URB1	100	83.824	ENSSTOG00000004539	URB1	100	83.824	Ictidomys_tridecemlineatus
ENSPPAG00000003423	URB1	99	45.305	ENSKMAG00000006001	urb1	99	47.443	Kryptolebias_marmoratus
ENSPPAG00000003423	URB1	94	51.263	ENSLBEG00000027208	urb1	98	51.824	Labrus_bergylta
ENSPPAG00000003423	URB1	99	48.485	ENSLACG00000017059	URB1	99	48.485	Latimeria_chalumnae
ENSPPAG00000003423	URB1	99	46.004	ENSLOCG00000009190	urb1	99	46.369	Lepisosteus_oculatus
ENSPPAG00000003423	URB1	99	79.254	ENSLAFG00000010407	URB1	100	79.254	Loxodonta_africana
ENSPPAG00000003423	URB1	100	95.773	ENSMFAG00000034391	URB1	97	95.773	Macaca_fascicularis
ENSPPAG00000003423	URB1	100	95.685	ENSMMUG00000010295	URB1	100	95.685	Macaca_mulatta
ENSPPAG00000003423	URB1	100	94.320	ENSMNEG00000032981	URB1	100	94.320	Macaca_nemestrina
ENSPPAG00000003423	URB1	100	96.081	ENSMLEG00000041435	URB1	100	96.081	Mandrillus_leucophaeus
ENSPPAG00000003423	URB1	99	43.082	ENSMAMG00000011238	urb1	99	42.989	Mastacembelus_armatus
ENSPPAG00000003423	URB1	99	40.937	ENSMZEG00005011862	urb1	99	41.872	Maylandia_zebra
ENSPPAG00000003423	URB1	98	57.232	ENSMGAG00000014512	URB1	99	57.232	Meleagris_gallopavo
ENSPPAG00000003423	URB1	94	80.876	ENSMAUG00000010516	Urb1	99	80.854	Mesocricetus_auratus
ENSPPAG00000003423	URB1	99	86.306	ENSMICG00000016424	URB1	99	86.306	Microcebus_murinus
ENSPPAG00000003423	URB1	99	75.683	ENSMOCG00000012613	Urb1	99	75.605	Microtus_ochrogaster
ENSPPAG00000003423	URB1	99	64.987	ENSMODG00000021076	URB1	100	64.987	Monodelphis_domestica
ENSPPAG00000003423	URB1	94	52.376	ENSMALG00000017411	urb1	97	52.798	Monopterus_albus
ENSPPAG00000003423	URB1	99	76.199	MGP_CAROLIEiJ_G0020948	Urb1	99	76.199	Mus_caroli
ENSPPAG00000003423	URB1	99	76.727	ENSMUSG00000039929	Urb1	99	76.727	Mus_musculus
ENSPPAG00000003423	URB1	99	76.727	MGP_PahariEiJ_G0016653	Urb1	99	76.771	Mus_pahari
ENSPPAG00000003423	URB1	99	76.408	MGP_SPRETEiJ_G0021854	Urb1	99	76.408	Mus_spretus
ENSPPAG00000003423	URB1	100	80.502	ENSMPUG00000001123	URB1	100	80.502	Mustela_putorius_furo
ENSPPAG00000003423	URB1	99	77.983	ENSNGAG00000001905	Urb1	99	77.983	Nannospalax_galili
ENSPPAG00000003423	URB1	82	45.942	ENSNBRG00000001049	urb1	99	46.229	Neolamprologus_brichardi
ENSPPAG00000003423	URB1	100	95.068	ENSNLEG00000026872	URB1	100	95.068	Nomascus_leucogenys
ENSPPAG00000003423	URB1	93	67.366	ENSMEUG00000010828	URB1	96	60.154	Notamacropus_eugenii
ENSPPAG00000003423	URB1	99	75.088	ENSOPRG00000013482	URB1	100	75.088	Ochotona_princeps
ENSPPAG00000003423	URB1	100	79.912	ENSODEG00000002587	URB1	99	79.912	Octodon_degus
ENSPPAG00000003423	URB1	99	45.312	ENSONIG00000005599	urb1	99	45.487	Oreochromis_niloticus
ENSPPAG00000003423	URB1	99	81.261	ENSOCUG00000009381	URB1	99	81.261	Oryctolagus_cuniculus
ENSPPAG00000003423	URB1	99	43.482	ENSORLG00000003429	urb1	99	43.563	Oryzias_latipes
ENSPPAG00000003423	URB1	99	43.294	ENSORLG00020013785	urb1	99	43.373	Oryzias_latipes_hni
ENSPPAG00000003423	URB1	99	42.471	ENSORLG00015019421	urb1	97	46.521	Oryzias_latipes_hsok
ENSPPAG00000003423	URB1	77	50.585	ENSOMEG00000002094	urb1	98	50.585	Oryzias_melastigma
ENSPPAG00000003423	URB1	99	85.639	ENSOGAG00000017140	URB1	100	85.639	Otolemur_garnettii
ENSPPAG00000003423	URB1	97	78.098	ENSOARG00000013679	URB1	99	78.014	Ovis_aries
ENSPPAG00000003423	URB1	100	82.438	ENSPPRG00000023131	URB1	100	82.438	Panthera_pardus
ENSPPAG00000003423	URB1	92	80.532	ENSPTIG00000016125	URB1	98	80.532	Panthera_tigris_altaica
ENSPPAG00000003423	URB1	100	99.868	ENSPTRG00000013852	URB1	100	99.868	Pan_troglodytes
ENSPPAG00000003423	URB1	100	96.125	ENSPANG00000021964	URB1	100	96.125	Papio_anubis
ENSPPAG00000003423	URB1	99	45.499	ENSPKIG00000003683	urb1	98	45.815	Paramormyrops_kingsleyae
ENSPPAG00000003423	URB1	99	77.259	ENSPEMG00000021205	Urb1	99	77.259	Peromyscus_maniculatus_bairdii
ENSPPAG00000003423	URB1	75	36.090	ENSPMAG00000009733	URB1	100	34.191	Petromyzon_marinus
ENSPPAG00000003423	URB1	99	64.608	ENSPCIG00000016350	URB1	100	64.520	Phascolarctos_cinereus
ENSPPAG00000003423	URB1	96	42.838	ENSPLAG00000004371	urb1	99	42.838	Poecilia_latipinna
ENSPPAG00000003423	URB1	98	43.550	ENSPMEG00000006634	urb1	98	43.610	Poecilia_mexicana
ENSPPAG00000003423	URB1	98	43.747	ENSPREG00000013453	urb1	98	43.853	Poecilia_reticulata
ENSPPAG00000003423	URB1	100	96.830	ENSPPYG00000011359	URB1	100	96.830	Pongo_abelii
ENSPPAG00000003423	URB1	99	68.182	ENSPCAG00000007430	URB1	99	68.182	Procavia_capensis
ENSPPAG00000003423	URB1	100	87.362	ENSPCOG00000022695	URB1	100	87.362	Propithecus_coquereli
ENSPPAG00000003423	URB1	100	80.678	ENSPVAG00000000889	URB1	100	80.678	Pteropus_vampyrus
ENSPPAG00000003423	URB1	99	43.559	ENSPNYG00000010589	urb1	99	43.394	Pundamilia_nyererei
ENSPPAG00000003423	URB1	99	40.563	ENSPNAG00000019324	urb1	99	40.475	Pygocentrus_nattereri
ENSPPAG00000003423	URB1	99	76.385	ENSRNOG00000002080	Urb1	99	76.473	Rattus_norvegicus
ENSPPAG00000003423	URB1	100	95.156	ENSRBIG00000033122	URB1	100	95.156	Rhinopithecus_bieti
ENSPPAG00000003423	URB1	100	95.288	ENSRROG00000040237	URB1	100	95.288	Rhinopithecus_roxellana
ENSPPAG00000003423	URB1	100	92.958	ENSSBOG00000027672	URB1	100	92.958	Saimiri_boliviensis_boliviensis
ENSPPAG00000003423	URB1	99	64.079	ENSSHAG00000005140	URB1	100	64.073	Sarcophilus_harrisii
ENSPPAG00000003423	URB1	93	46.295	ENSSFOG00015000339	urb1	99	46.176	Scleropages_formosus
ENSPPAG00000003423	URB1	98	44.204	ENSSMAG00000003782	urb1	99	44.054	Scophthalmus_maximus
ENSPPAG00000003423	URB1	99	44.826	ENSSDUG00000012313	urb1	99	44.956	Seriola_dumerili
ENSPPAG00000003423	URB1	99	44.787	ENSSLDG00000023179	urb1	99	44.657	Seriola_lalandi_dorsalis
ENSPPAG00000003423	URB1	99	55.183	ENSSPUG00000012447	URB1	99	55.366	Sphenodon_punctatus
ENSPPAG00000003423	URB1	99	44.222	ENSSPAG00000006325	urb1	99	44.518	Stegastes_partitus
ENSPPAG00000003423	URB1	100	79.736	ENSSSCG00000032024	URB1	100	79.736	Sus_scrofa
ENSPPAG00000003423	URB1	73	58.373	ENSTGUG00000013442	URB1	100	58.039	Taeniopygia_guttata
ENSPPAG00000003423	URB1	99	44.119	ENSTRUG00000009372	urb1	99	44.184	Takifugu_rubripes
ENSPPAG00000003423	URB1	99	43.065	ENSTNIG00000016277	urb1	100	43.015	Tetraodon_nigroviridis
ENSPPAG00000003423	URB1	81	86.087	ENSTBEG00000010044	URB1	81	86.087	Tupaia_belangeri
ENSPPAG00000003423	URB1	91	79.498	ENSTTRG00000007712	URB1	92	79.707	Tursiops_truncatus
ENSPPAG00000003423	URB1	100	82.130	ENSUAMG00000012231	URB1	99	82.130	Ursus_americanus
ENSPPAG00000003423	URB1	95	82.261	ENSUMAG00000017419	URB1	98	83.475	Ursus_maritimus
ENSPPAG00000003423	URB1	68	88.889	ENSVPAG00000001164	URB1	68	88.889	Vicugna_pacos
ENSPPAG00000003423	URB1	100	82.425	ENSVVUG00000000551	URB1	100	82.425	Vulpes_vulpes
ENSPPAG00000003423	URB1	99	50.065	ENSXETG00000009895	urb1	99	50.502	Xenopus_tropicalis
ENSPPAG00000003423	URB1	99	40.899	ENSXCOG00000005500	urb1	99	40.947	Xiphophorus_couchianus
ENSPPAG00000003423	URB1	99	40.935	ENSXMAG00000007253	urb1	99	40.984	Xiphophorus_maculatus