EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000004108 (Gene tree)
Gene ID: 100973447
Gene Symbol: SETX
Alias: -
Full Name: senataxin
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 92899 bases
Position: chr9:132016767-132109665
Accession: 100973447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000001064	UvrD-helicase	PF00580.21	2.7e-08	1	1
ENSPPAP00000001052	UvrD-helicase	PF00580.21	9e-05	1	1
ENSPPAP00000001064	ResIII	PF04851.15	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000004861	SETX-201	10770	XM_003822403	ENSPPAP00000001052	2669 (aa)	XP_003822451	A0A2R8Z830
ENSPPAT00000004958	SETX-202	2544	-	ENSPPAP00000001064	847 (aa)	-	A0A2R8Z8B0

Gene Model

Click here to download ENSPPAG00000004108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000004108's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000004108	SETX	100	98.245	ENSG00000107290	SETX	100	98.245	Homo_sapiens
ENSPPAG00000004108	SETX	77	46.257	ENSAMXG00000014406	-	85	42.540	Astyanax_mexicanus
ENSPPAG00000004108	SETX	100	88.441	ENSCJAG00000018245	SETX	100	88.553	Callithrix_jacchus
ENSPPAG00000004108	SETX	93	81.795	ENSCAFG00020024489	SETX	100	81.490	Canis_lupus_dingo
ENSPPAG00000004108	SETX	99	79.669	ENSTSYG00000030808	-	98	79.669	Carlito_syrichta
ENSPPAG00000004108	SETX	94	81.179	ENSCPOG00000001492	SETX	100	71.227	Cavia_porcellus
ENSPPAG00000004108	SETX	98	78.922	ENSCLAG00000012582	SETX	99	74.024	Chinchilla_lanigera
ENSPPAG00000004108	SETX	96	72.093	ENSETEG00000008111	-	73	91.898	Echinops_telfairi
ENSPPAG00000004108	SETX	91	82.290	ENSECAG00000012019	SETX	99	82.331	Equus_caballus
ENSPPAG00000004108	SETX	80	42.857	ENSELUG00000022536	-	83	42.881	Esox_lucius
ENSPPAG00000004108	SETX	96	82.244	ENSFCAG00000007102	SETX	100	77.415	Felis_catus
ENSPPAG00000004108	SETX	78	72.379	ENSFALG00000001464	SETX	86	72.379	Ficedula_albicollis
ENSPPAG00000004108	SETX	100	98.347	ENSGGOG00000027664	SETX	100	98.347	Gorilla_gorilla
ENSPPAG00000004108	SETX	77	46.596	ENSIPUG00000006685	setx	77	44.918	Ictalurus_punctatus
ENSPPAG00000004108	SETX	83	55.927	ENSLOCG00000004264	SETX	91	56.093	Lepisosteus_oculatus
ENSPPAG00000004108	SETX	69	92.599	ENSLAFG00000017327	-	100	80.420	Loxodonta_africana
ENSPPAG00000004108	SETX	93	79.161	ENSMOCG00000000848	Setx	99	67.619	Microtus_ochrogaster
ENSPPAG00000004108	SETX	93	82.211	MGP_PahariEiJ_G0024821	Setx	100	71.699	Mus_pahari
ENSPPAG00000004108	SETX	98	93.813	ENSNLEG00000012839	SETX	100	93.813	Nomascus_leucogenys
ENSPPAG00000004108	SETX	99	77.332	ENSOCUG00000005616	SETX	96	70.767	Oryctolagus_cuniculus
ENSPPAG00000004108	SETX	94	87.060	ENSOGAG00000013387	SETX	99	80.096	Otolemur_garnettii
ENSPPAG00000004108	SETX	99	79.113	ENSPPRG00000012867	SETX	100	77.377	Panthera_pardus
ENSPPAG00000004108	SETX	96	82.367	ENSPTIG00000021101	SETX	100	77.200	Panthera_tigris_altaica
ENSPPAG00000004108	SETX	100	99.882	ENSPTRG00000021495	SETX	100	99.882	Pan_troglodytes
ENSPPAG00000004108	SETX	77	49.587	ENSPKIG00000025162	SETX	84	49.917	Paramormyrops_kingsleyae
ENSPPAG00000004108	SETX	59	93.103	ENSSARG00000002336	-	63	93.103	Sorex_araneus
ENSPPAG00000004108	SETX	99	56.548	ENSSPUG00000016332	SETX	91	70.335	Sphenodon_punctatus
ENSPPAG00000004108	SETX	90	88.380	ENSSSCG00000005724	SETX	99	75.900	Sus_scrofa
ENSPPAG00000004108	SETX	79	72.047	ENSTGUG00000005117	SETX	86	72.167	Taeniopygia_guttata
ENSPPAG00000004108	SETX	99	84.970	ENSUMAG00000016729	SETX	98	84.970	Ursus_maritimus
ENSPPAG00000004108	SETX	79	63.455	ENSXETG00000006254	setx	95	63.742	Xenopus_tropicalis