EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000006869 (Gene tree)
Gene ID: 100990848
Gene Symbol: DDX53
Alias: -
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 1896 bases
Position: chrX:22976707-22978602
Accession: 100990848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000001516	KH_1	PF00013.29	5.9e-12	1	1
ENSPPAP00000001516	DEAD	PF00270.29	4.2e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000007426	DDX53-201	1896	XM_003819569	ENSPPAP00000001516	631 (aa)	XP_003819617	A0A2R8ZDA1

Gene Model

Click here to download ENSPPAG00000006869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000006869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000006869	DDX53	62	34.257	ENSPPAG00000039793	DDX47	85	34.257
ENSPPAG00000006869	DDX53	51	30.247	ENSPPAG00000014857	EIF4A2	88	30.247
ENSPPAG00000006869	DDX53	99	61.661	ENSPPAG00000034199	DDX43	96	61.661
ENSPPAG00000006869	DDX53	66	30.575	ENSPPAG00000028453	DDX52	73	30.377
ENSPPAG00000006869	DDX53	54	33.523	ENSPPAG00000035217	DDX49	71	33.523
ENSPPAG00000006869	DDX53	59	32.982	ENSPPAG00000031649	DDX59	59	32.982
ENSPPAG00000006869	DDX53	58	35.106	ENSPPAG00000035843	DDX27	51	35.106
ENSPPAG00000006869	DDX53	65	37.613	ENSPPAG00000037807	DDX23	91	38.214
ENSPPAG00000006869	DDX53	70	42.377	ENSPPAG00000042301	DDX17	87	42.781
ENSPPAG00000006869	DDX53	56	30.854	ENSPPAG00000040723	DDX50	51	30.854
ENSPPAG00000006869	DDX53	61	31.421	ENSPPAG00000038775	-	52	31.421
ENSPPAG00000006869	DDX53	71	35.177	ENSPPAG00000007496	DDX42	62	34.956
ENSPPAG00000006869	DDX53	57	31.335	ENSPPAG00000033473	DDX18	53	31.335
ENSPPAG00000006869	DDX53	56	32.591	ENSPPAG00000034894	DDX6	70	32.951
ENSPPAG00000006869	DDX53	57	36.828	ENSPPAG00000033915	DDX4	64	36.828
ENSPPAG00000006869	DDX53	52	31.024	ENSPPAG00000035131	-	87	31.024
ENSPPAG00000006869	DDX53	57	36.675	ENSPPAG00000041809	DDX3X	62	36.364
ENSPPAG00000006869	DDX53	69	41.892	ENSPPAG00000042005	DDX5	77	41.892
ENSPPAG00000006869	DDX53	67	33.032	ENSPPAG00000029499	DDX41	63	34.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000006869	DDX53	100	96.830	ENSG00000184735	DDX53	100	96.830	Homo_sapiens
ENSPPAG00000006869	DDX53	99	80.892	ENSCCAG00000024171	-	100	80.892	Cebus_capucinus
ENSPPAG00000006869	DDX53	99	80.892	ENSCCAG00000021534	-	100	80.892	Cebus_capucinus
ENSPPAG00000006869	DDX53	99	88.394	ENSCSAG00000019540	DDX53	99	88.394	Chlorocebus_sabaeus
ENSPPAG00000006869	DDX53	100	99.683	ENSPTRG00000028313	DDX53	100	99.683	Pan_troglodytes
ENSPPAG00000006869	DDX53	99	93.005	ENSPPYG00000020185	DDX53	100	93.005	Pongo_abelii