EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000011428 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 8261 bases
Position: chr6:161156352-161164612
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000002669	SRP72	PF08492.12	2.1e-16	1	1
ENSPPAP00000002667	SRP72	PF08492.12	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000012637	-	1764	-	ENSPPAP00000002669	587 (aa)	-	A0A2R8ZJ21
ENSPPAT00000012629	-	1770	-	ENSPPAP00000002667	589 (aa)	-	A0A2R8ZCQ4
ENSPPAT00000012680	-	1170	-	ENSPPAP00000002676	389 (aa)	-	A0A2R8ZC93
ENSPPAT00000012663	-	666	-	ENSPPAP00000002671	221 (aa)	-	A0A2R8ZC88

Gene Model

Click here to download ENSPPAG00000011428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000011428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000011428	-	95	71.713	ENSPPAG00000042265	SRP72	99	70.695
ENSPPAG00000011428	-	75	60.000	ENSPPAG00000032490	-	91	60.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000011428	-	95	71.713	ENSG00000174780	SRP72	99	70.695	Homo_sapiens
ENSPPAG00000011428	-	94	51.097	ENSAPOG00000019438	srp72	97	50.700	Acanthochromis_polyacanthus
ENSPPAG00000011428	-	93	71.540	ENSAMEG00000008469	SRP72	98	70.091	Ailuropoda_melanoleuca
ENSPPAG00000011428	-	95	54.848	ENSACIG00000000488	srp72	99	54.586	Amphilophus_citrinellus
ENSPPAG00000011428	-	95	55.793	ENSAOCG00000011256	srp72	99	55.371	Amphiprion_ocellaris
ENSPPAG00000011428	-	95	55.728	ENSAPEG00000001512	srp72	99	55.300	Amphiprion_percula
ENSPPAG00000011428	-	88	54.781	ENSATEG00000006781	srp72	99	54.781	Anabas_testudineus
ENSPPAG00000011428	-	95	62.175	ENSAPLG00000008751	SRP72	98	61.271	Anas_platyrhynchos
ENSPPAG00000011428	-	94	62.751	ENSACAG00000002381	SRP72	97	61.538	Anolis_carolinensis
ENSPPAG00000011428	-	99	69.444	ENSANAG00000020836	-	100	68.759	Aotus_nancymaae
ENSPPAG00000011428	-	95	55.319	ENSACLG00000014617	srp72	99	55.053	Astatotilapia_calliptera
ENSPPAG00000011428	-	95	56.422	ENSAMXG00000004011	srp72	98	56.116	Astyanax_mexicanus
ENSPPAG00000011428	-	95	70.489	ENSBTAG00000010593	SRP72	99	69.486	Bos_taurus
ENSPPAG00000011428	-	95	70.948	ENSCJAG00000017998	SRP72	99	69.940	Callithrix_jacchus
ENSPPAG00000011428	-	95	71.254	ENSCAFG00000002244	SRP72	99	70.242	Canis_familiaris
ENSPPAG00000011428	-	95	71.254	ENSCAFG00020027338	SRP72	99	68.960	Canis_lupus_dingo
ENSPPAG00000011428	-	95	68.750	ENSCHIG00000021465	SRP72	99	67.771	Capra_hircus
ENSPPAG00000011428	-	98	69.701	ENSTSYG00000010571	-	98	69.985	Carlito_syrichta
ENSPPAG00000011428	-	81	63.671	ENSCAPG00000016668	SRP72	93	69.874	Cavia_aperea
ENSPPAG00000011428	-	95	71.101	ENSCPOG00000000218	SRP72	99	70.091	Cavia_porcellus
ENSPPAG00000011428	-	99	68.242	ENSCCAG00000030830	-	99	67.976	Cebus_capucinus
ENSPPAG00000011428	-	99	69.298	ENSCCAG00000030683	-	100	68.613	Cebus_capucinus
ENSPPAG00000011428	-	97	72.089	ENSCATG00000045359	-	99	72.019	Cercocebus_atys
ENSPPAG00000011428	-	95	71.560	ENSCATG00000008072	SRP72	99	70.544	Cercocebus_atys
ENSPPAG00000011428	-	95	70.489	ENSCLAG00000003571	SRP72	99	69.486	Chinchilla_lanigera
ENSPPAG00000011428	-	95	66.003	ENSCSAG00000005079	SRP72	99	64.697	Chlorocebus_sabaeus
ENSPPAG00000011428	-	85	79.412	ENSCHOG00000013240	SRP72	86	79.412	Choloepus_hoffmanni
ENSPPAG00000011428	-	93	63.608	ENSCPBG00000015015	SRP72	99	62.594	Chrysemys_picta_bellii
ENSPPAG00000011428	-	85	36.283	ENSCING00000002417	-	82	36.283	Ciona_intestinalis
ENSPPAG00000011428	-	86	36.464	ENSCSAVG00000011288	-	97	31.953	Ciona_savignyi
ENSPPAG00000011428	-	95	71.560	ENSCANG00000041709	SRP72	99	70.544	Colobus_angolensis_palliatus
ENSPPAG00000011428	-	93	75.352	ENSCANG00000037920	-	96	75.352	Colobus_angolensis_palliatus
ENSPPAG00000011428	-	95	70.031	ENSCGRG00001013548	Srp72	99	69.033	Cricetulus_griseus_chok1gshd
ENSPPAG00000011428	-	89	70.227	ENSCGRG00000003013	Srp72	98	69.169	Cricetulus_griseus_crigri
ENSPPAG00000011428	-	95	55.725	ENSCSEG00000003616	srp72	99	55.053	Cynoglossus_semilaevis
ENSPPAG00000011428	-	87	55.229	ENSCVAG00000001520	srp72	99	55.065	Cyprinodon_variegatus
ENSPPAG00000011428	-	80	55.263	ENSDARG00000014139	srp72	98	54.561	Danio_rerio
ENSPPAG00000011428	-	95	66.109	ENSDNOG00000039012	SRP72	82	65.165	Dasypus_novemcinctus
ENSPPAG00000011428	-	93	70.762	ENSDORG00000000171	Srp72	99	69.033	Dipodomys_ordii
ENSPPAG00000011428	-	88	31.994	FBgn0038810	Srp72	94	32.310	Drosophila_melanogaster
ENSPPAG00000011428	-	93	69.673	ENSETEG00000005191	SRP72	99	68.127	Echinops_telfairi
ENSPPAG00000011428	-	82	43.590	ENSEBUG00000003696	srp72	99	42.315	Eptatretus_burgeri
ENSPPAG00000011428	-	95	70.642	ENSEASG00005017747	SRP72	99	69.637	Equus_asinus_asinus
ENSPPAG00000011428	-	95	70.642	ENSECAG00000006920	SRP72	99	69.637	Equus_caballus
ENSPPAG00000011428	-	94	55.267	ENSELUG00000022415	srp72	99	55.027	Esox_lucius
ENSPPAG00000011428	-	94	71.097	ENSFCAG00000027600	SRP72	99	69.940	Felis_catus
ENSPPAG00000011428	-	93	63.509	ENSFALG00000006713	SRP72	99	62.142	Ficedula_albicollis
ENSPPAG00000011428	-	95	70.399	ENSFDAG00000002014	-	99	69.335	Fukomys_damarensis
ENSPPAG00000011428	-	93	50.256	ENSFDAG00000009793	-	95	49.578	Fukomys_damarensis
ENSPPAG00000011428	-	95	54.932	ENSFHEG00000017652	srp72	91	55.120	Fundulus_heteroclitus
ENSPPAG00000011428	-	94	52.688	ENSGMOG00000005986	srp72	98	52.128	Gadus_morhua
ENSPPAG00000011428	-	93	63.396	ENSGALG00000011403	SRP72	98	62.519	Gallus_gallus
ENSPPAG00000011428	-	95	55.319	ENSGAFG00000017762	srp72	99	54.970	Gambusia_affinis
ENSPPAG00000011428	-	95	53.718	ENSGACG00000016749	srp72	98	53.916	Gasterosteus_aculeatus
ENSPPAG00000011428	-	83	62.287	ENSGAGG00000024611	SRP72	97	61.499	Gopherus_agassizii
ENSPPAG00000011428	-	99	70.468	ENSGGOG00000013234	-	100	69.781	Gorilla_gorilla
ENSPPAG00000011428	-	95	55.319	ENSHBUG00000020723	srp72	99	55.053	Haplochromis_burtoni
ENSPPAG00000011428	-	95	58.179	ENSHGLG00000003950	-	99	56.977	Heterocephalus_glaber_female
ENSPPAG00000011428	-	95	55.850	ENSHGLG00000018597	-	98	55.573	Heterocephalus_glaber_female
ENSPPAG00000011428	-	95	68.105	ENSHGLG00000005029	-	99	67.123	Heterocephalus_glaber_female
ENSPPAG00000011428	-	95	70.687	ENSHGLG00000009791	SRP72	99	69.683	Heterocephalus_glaber_female
ENSPPAG00000011428	-	96	60.870	ENSHGLG00000010633	-	97	65.546	Heterocephalus_glaber_female
ENSPPAG00000011428	-	95	70.687	ENSHGLG00100009021	SRP72	99	69.683	Heterocephalus_glaber_male
ENSPPAG00000011428	-	95	68.105	ENSHGLG00100011236	-	99	67.123	Heterocephalus_glaber_male
ENSPPAG00000011428	-	95	59.003	ENSHGLG00100009346	-	99	58.413	Heterocephalus_glaber_male
ENSPPAG00000011428	-	95	58.010	ENSHGLG00100017133	-	99	56.811	Heterocephalus_glaber_male
ENSPPAG00000011428	-	95	55.590	ENSHCOG00000013760	srp72	99	55.068	Hippocampus_comes
ENSPPAG00000011428	-	95	54.740	ENSIPUG00000000210	srp72	99	54.173	Ictalurus_punctatus
ENSPPAG00000011428	-	95	71.101	ENSSTOG00000007305	SRP72	99	70.091	Ictidomys_tridecemlineatus
ENSPPAG00000011428	-	93	70.405	ENSJJAG00000018324	Srp72	99	68.477	Jaculus_jaculus
ENSPPAG00000011428	-	95	55.015	ENSKMAG00000003776	srp72	99	54.518	Kryptolebias_marmoratus
ENSPPAG00000011428	-	99	55.572	ENSLOCG00000002628	srp72	98	56.647	Lepisosteus_oculatus
ENSPPAG00000011428	-	95	70.336	ENSLAFG00000018307	SRP72	99	69.127	Loxodonta_africana
ENSPPAG00000011428	-	95	71.407	ENSMFAG00000031065	SRP72	99	70.393	Macaca_fascicularis
ENSPPAG00000011428	-	97	70.978	ENSMFAG00000037164	-	99	71.061	Macaca_fascicularis
ENSPPAG00000011428	-	94	70.478	ENSMMUG00000021262	-	99	70.478	Macaca_mulatta
ENSPPAG00000011428	-	98	71.111	ENSMMUG00000016368	SRP72	100	70.414	Macaca_mulatta
ENSPPAG00000011428	-	100	70.073	ENSMNEG00000038065	-	100	69.635	Macaca_nemestrina
ENSPPAG00000011428	-	99	70.294	ENSMLEG00000030140	-	100	69.604	Mandrillus_leucophaeus
ENSPPAG00000011428	-	95	54.656	ENSMAMG00000014989	srp72	87	54.299	Mastacembelus_armatus
ENSPPAG00000011428	-	95	55.319	ENSMZEG00005003325	srp72	99	55.053	Maylandia_zebra
ENSPPAG00000011428	-	89	59.612	ENSMGAG00000008567	SRP72	98	63.181	Meleagris_gallopavo
ENSPPAG00000011428	-	93	70.918	ENSMAUG00000001237	Srp72	99	69.486	Mesocricetus_auratus
ENSPPAG00000011428	-	99	68.375	ENSMICG00000008507	-	99	67.936	Microcebus_murinus
ENSPPAG00000011428	-	95	69.878	ENSMOCG00000020309	Srp72	99	68.882	Microtus_ochrogaster
ENSPPAG00000011428	-	95	52.888	ENSMMOG00000002627	srp72	99	53.092	Mola_mola
ENSPPAG00000011428	-	93	64.275	ENSMODG00000020697	SRP72	99	63.086	Monodelphis_domestica
ENSPPAG00000011428	-	95	53.951	ENSMALG00000003747	srp72	99	53.695	Monopterus_albus
ENSPPAG00000011428	-	95	69.725	MGP_CAROLIEiJ_G0027323	Srp72	99	68.731	Mus_caroli
ENSPPAG00000011428	-	95	69.725	ENSMUSG00000036323	Srp72	99	68.731	Mus_musculus
ENSPPAG00000011428	-	94	70.170	MGP_PahariEiJ_G0017103	Srp72	99	68.778	Mus_pahari
ENSPPAG00000011428	-	95	69.725	MGP_SPRETEiJ_G0028317	Srp72	99	68.731	Mus_spretus
ENSPPAG00000011428	-	93	71.695	ENSMPUG00000004828	SRP72	99	69.637	Mustela_putorius_furo
ENSPPAG00000011428	-	93	70.186	ENSMLUG00000007344	SRP72	98	68.580	Myotis_lucifugus
ENSPPAG00000011428	-	95	69.572	ENSNGAG00000012595	Srp72	99	68.477	Nannospalax_galili
ENSPPAG00000011428	-	95	52.432	ENSNBRG00000014492	srp72	99	52.121	Neolamprologus_brichardi
ENSPPAG00000011428	-	95	72.026	ENSNLEG00000008806	-	99	70.840	Nomascus_leucogenys
ENSPPAG00000011428	-	83	75.789	ENSMEUG00000005164	SRP72	88	70.707	Notamacropus_eugenii
ENSPPAG00000011428	-	93	69.159	ENSOPRG00000012521	SRP72	99	67.572	Ochotona_princeps
ENSPPAG00000011428	-	93	69.255	ENSODEG00000012214	SRP72	98	67.873	Octodon_degus
ENSPPAG00000011428	-	95	55.471	ENSONIG00000001446	srp72	98	55.204	Oreochromis_niloticus
ENSPPAG00000011428	-	94	51.761	ENSOANG00000008562	SRP72	98	51.360	Ornithorhynchus_anatinus
ENSPPAG00000011428	-	95	70.642	ENSOCUG00000012226	SRP72	99	69.789	Oryctolagus_cuniculus
ENSPPAG00000011428	-	94	53.846	ENSORLG00000020418	srp72	98	53.364	Oryzias_latipes
ENSPPAG00000011428	-	96	52.888	ENSORLG00020009138	srp72	97	51.740	Oryzias_latipes_hni
ENSPPAG00000011428	-	94	53.231	ENSORLG00015018251	srp72	98	52.752	Oryzias_latipes_hsok
ENSPPAG00000011428	-	95	53.188	ENSOMEG00000022008	srp72	98	53.521	Oryzias_melastigma
ENSPPAG00000011428	-	95	70.336	ENSOGAG00000003578	SRP72	99	69.335	Otolemur_garnettii
ENSPPAG00000011428	-	95	70.642	ENSOARG00000004329	SRP72	99	69.637	Ovis_aries
ENSPPAG00000011428	-	93	71.384	ENSPPRG00000015991	SRP72	99	69.637	Panthera_pardus
ENSPPAG00000011428	-	93	71.384	ENSPTIG00000018786	SRP72	99	69.637	Panthera_tigris_altaica
ENSPPAG00000011428	-	100	95.881	ENSPTRG00000048100	-	100	95.881	Pan_troglodytes
ENSPPAG00000011428	-	75	60.000	ENSPTRG00000043609	-	94	58.664	Pan_troglodytes
ENSPPAG00000011428	-	99	70.614	ENSPTRG00000048466	-	100	69.927	Pan_troglodytes
ENSPPAG00000011428	-	95	71.560	ENSPANG00000005495	SRP72	99	70.544	Papio_anubis
ENSPPAG00000011428	-	93	71.333	ENSPANG00000030230	-	99	71.501	Papio_anubis
ENSPPAG00000011428	-	89	63.768	ENSPSIG00000003003	SRP72	98	62.798	Pelodiscus_sinensis
ENSPPAG00000011428	-	93	70.140	ENSPEMG00000012828	-	98	68.533	Peromyscus_maniculatus_bairdii
ENSPPAG00000011428	-	94	65.944	ENSPCIG00000000732	SRP72	98	64.653	Phascolarctos_cinereus
ENSPPAG00000011428	-	95	54.863	ENSPFOG00000003480	srp72	99	54.518	Poecilia_formosa
ENSPPAG00000011428	-	95	55.015	ENSPLAG00000020122	srp72	99	54.669	Poecilia_latipinna
ENSPPAG00000011428	-	95	54.559	ENSPMEG00000019988	srp72	99	54.217	Poecilia_mexicana
ENSPPAG00000011428	-	95	54.711	ENSPREG00000006218	srp72	99	54.367	Poecilia_reticulata
ENSPPAG00000011428	-	55	60.847	ENSPPYG00000009152	-	97	60.622	Pongo_abelii
ENSPPAG00000011428	-	95	71.603	ENSPPYG00000014752	-	77	70.588	Pongo_abelii
ENSPPAG00000011428	-	95	71.716	ENSPVAG00000005590	SRP72	99	70.427	Pteropus_vampyrus
ENSPPAG00000011428	-	95	55.623	ENSPNYG00000001916	srp72	99	55.354	Pundamilia_nyererei
ENSPPAG00000011428	-	95	56.662	ENSPNAG00000022424	srp72	99	55.994	Pygocentrus_nattereri
ENSPPAG00000011428	-	95	69.525	ENSRNOG00000002100	LOC108348180	99	68.381	Rattus_norvegicus
ENSPPAG00000011428	-	95	70.957	ENSRBIG00000029328	-	99	70.201	Rhinopithecus_bieti
ENSPPAG00000011428	-	95	66.462	ENSRBIG00000042069	SRP72	99	65.257	Rhinopithecus_bieti
ENSPPAG00000011428	-	95	71.560	ENSRROG00000035704	SRP72	99	70.544	Rhinopithecus_roxellana
ENSPPAG00000011428	-	91	64.623	ENSSHAG00000000614	SRP72	98	62.443	Sarcophilus_harrisii
ENSPPAG00000011428	-	95	56.575	ENSSFOG00015002026	srp72	99	55.690	Scleropages_formosus
ENSPPAG00000011428	-	94	53.681	ENSSMAG00000007639	srp72	97	53.599	Scophthalmus_maximus
ENSPPAG00000011428	-	95	55.539	ENSSDUG00000007345	srp72	98	55.873	Seriola_dumerili
ENSPPAG00000011428	-	95	55.471	ENSSLDG00000021819	srp72	98	55.488	Seriola_lalandi_dorsalis
ENSPPAG00000011428	-	72	67.105	ENSSARG00000005804	SRP72	73	65.464	Sorex_araneus
ENSPPAG00000011428	-	93	63.240	ENSSPUG00000009740	SRP72	98	61.667	Sphenodon_punctatus
ENSPPAG00000011428	-	95	54.642	ENSSPAG00000011565	srp72	99	54.902	Stegastes_partitus
ENSPPAG00000011428	-	94	70.886	ENSSSCG00000008900	SRP72	98	69.706	Sus_scrofa
ENSPPAG00000011428	-	93	63.509	ENSTGUG00000004767	SRP72	99	62.048	Taeniopygia_guttata
ENSPPAG00000011428	-	95	53.823	ENSTRUG00000009831	srp72	98	53.729	Takifugu_rubripes
ENSPPAG00000011428	-	95	55.420	ENSTNIG00000013073	srp72	98	55.152	Tetraodon_nigroviridis
ENSPPAG00000011428	-	72	67.327	ENSTBEG00000007394	SRP72	64	74.747	Tupaia_belangeri
ENSPPAG00000011428	-	89	70.874	ENSTTRG00000010945	SRP72	99	69.808	Tursiops_truncatus
ENSPPAG00000011428	-	56	71.354	ENSUAMG00000001701	SRP72	98	70.180	Ursus_americanus
ENSPPAG00000011428	-	93	71.384	ENSUMAG00000008151	SRP72	99	69.940	Ursus_maritimus
ENSPPAG00000011428	-	95	68.855	ENSVPAG00000000458	SRP72	99	67.620	Vicugna_pacos
ENSPPAG00000011428	-	95	71.254	ENSVVUG00000006020	SRP72	99	70.242	Vulpes_vulpes
ENSPPAG00000011428	-	89	57.581	ENSXETG00000010205	srp72	99	57.006	Xenopus_tropicalis
ENSPPAG00000011428	-	95	54.863	ENSXMAG00000018000	srp72	99	54.669	Xiphophorus_maculatus