EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000011619 (Gene tree)
Gene ID: 100987584
Gene Symbol: NCL
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 9816 bases
Position: chr2B:237490378-237500193
Accession: 100987584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000002680	RRM_1	PF00076.22	5e-58	1	4
ENSPPAP00000002680	RRM_1	PF00076.22	5e-58	2	4
ENSPPAP00000002680	RRM_1	PF00076.22	5e-58	3	4
ENSPPAP00000002680	RRM_1	PF00076.22	5e-58	4	4
ENSPPAP00000002684	RRM_1	PF00076.22	7.5e-40	1	2
ENSPPAP00000002684	RRM_1	PF00076.22	7.5e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000012731	NCL-202	1449	-	ENSPPAP00000002684	482 (aa)	-	A0A2R8ZJ35
ENSPPAT00000012700	NCL-201	2800	XM_003821864	ENSPPAP00000002680	710 (aa)	XP_003821912	A0A2R8ZC94

Gene Model

Click here to download ENSPPAG00000011619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000011619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000011619	NCL	100	99.437	ENSG00000115053	NCL	100	99.437	Homo_sapiens
ENSPPAG00000011619	NCL	62	97.494	ENSAMEG00000016289	NCL	62	92.099	Ailuropoda_melanoleuca
ENSPPAG00000011619	NCL	97	78.621	ENSANAG00000024378	-	85	87.879	Aotus_nancymaae
ENSPPAG00000011619	NCL	100	95.938	ENSANAG00000035814	-	100	95.938	Aotus_nancymaae
ENSPPAG00000011619	NCL	88	79.905	ENSBTAG00000026909	-	97	92.642	Bos_taurus
ENSPPAG00000011619	NCL	89	92.157	ENSBTAG00000051320	-	73	90.141	Bos_taurus
ENSPPAG00000011619	NCL	94	82.507	ENSBTAG00000016174	NCL	64	92.377	Bos_taurus
ENSPPAG00000011619	NCL	100	81.405	ENSBTAG00000050728	-	85	90.164	Bos_taurus
ENSPPAG00000011619	NCL	92	91.781	ENSCJAG00000013538	NCL	92	91.324	Callithrix_jacchus
ENSPPAG00000011619	NCL	100	90.656	ENSCAFG00000011037	NCL	92	89.771	Canis_familiaris
ENSPPAG00000011619	NCL	84	89.570	ENSCAFG00020023145	NCL	87	89.696	Canis_lupus_dingo
ENSPPAG00000011619	NCL	100	84.836	ENSCHIG00000021052	-	94	96.503	Capra_hircus
ENSPPAG00000011619	NCL	85	86.949	ENSCHIG00000010894	-	74	97.727	Capra_hircus
ENSPPAG00000011619	NCL	92	80.365	ENSCHIG00000026149	-	63	84.787	Capra_hircus
ENSPPAG00000011619	NCL	91	72.653	ENSCHIG00000012143	-	84	78.231	Capra_hircus
ENSPPAG00000011619	NCL	90	75.587	ENSTSYG00000036886	-	91	68.203	Carlito_syrichta
ENSPPAG00000011619	NCL	92	89.160	ENSTSYG00000004355	-	92	89.771	Carlito_syrichta
ENSPPAG00000011619	NCL	95	86.806	ENSTSYG00000029779	-	98	86.919	Carlito_syrichta
ENSPPAG00000011619	NCL	100	91.531	ENSCAPG00000009405	NCL	91	78.834	Cavia_aperea
ENSPPAG00000011619	NCL	100	91.531	ENSCPOG00000001034	NCL	92	78.939	Cavia_porcellus
ENSPPAG00000011619	NCL	82	77.665	ENSCCAG00000000551	-	76	89.552	Cebus_capucinus
ENSPPAG00000011619	NCL	63	90.228	ENSCCAG00000021040	-	92	92.945	Cebus_capucinus
ENSPPAG00000011619	NCL	100	99.015	ENSCATG00000037033	NCL	100	99.015	Cercocebus_atys
ENSPPAG00000011619	NCL	100	91.531	ENSCLAG00000013080	NCL	92	83.283	Chinchilla_lanigera
ENSPPAG00000011619	NCL	62	99.773	ENSCSAG00000006660	NCL	95	99.773	Chlorocebus_sabaeus
ENSPPAG00000011619	NCL	62	75.799	ENSCHOG00000012860	NCL	88	74.318	Choloepus_hoffmanni
ENSPPAG00000011619	NCL	58	100.000	ENSCANG00000036756	NCL	94	100.000	Colobus_angolensis_palliatus
ENSPPAG00000011619	NCL	92	67.270	ENSCGRG00001022350	-	95	67.223	Cricetulus_griseus_chok1gshd
ENSPPAG00000011619	NCL	92	82.040	ENSCGRG00001024315	-	91	81.887	Cricetulus_griseus_chok1gshd
ENSPPAG00000011619	NCL	92	67.722	ENSCGRG00000000507	-	52	83.182	Cricetulus_griseus_crigri
ENSPPAG00000011619	NCL	85	83.687	ENSCGRG00000017894	-	88	81.892	Cricetulus_griseus_crigri
ENSPPAG00000011619	NCL	100	83.866	ENSDNOG00000010783	-	92	84.885	Dasypus_novemcinctus
ENSPPAG00000011619	NCL	100	73.816	ENSDNOG00000046347	-	99	71.989	Dasypus_novemcinctus
ENSPPAG00000011619	NCL	92	77.385	ENSDORG00000012513	-	91	77.727	Dipodomys_ordii
ENSPPAG00000011619	NCL	90	82.353	ENSDORG00000023596	-	92	69.444	Dipodomys_ordii
ENSPPAG00000011619	NCL	54	90.789	ENSETEG00000018937	-	85	81.086	Echinops_telfairi
ENSPPAG00000011619	NCL	62	61.937	ENSETEG00000008553	-	88	61.851	Echinops_telfairi
ENSPPAG00000011619	NCL	72	69.048	ENSETEG00000008139	-	89	66.757	Echinops_telfairi
ENSPPAG00000011619	NCL	53	90.451	ENSETEG00000014756	-	86	90.501	Echinops_telfairi
ENSPPAG00000011619	NCL	98	91.158	ENSEASG00005008488	NCL	100	90.275	Equus_asinus_asinus
ENSPPAG00000011619	NCL	100	89.583	ENSECAG00000021868	NCL	62	92.534	Equus_caballus
ENSPPAG00000011619	NCL	85	82.178	ENSEEUG00000005913	NCL	85	81.848	Erinaceus_europaeus
ENSPPAG00000011619	NCL	100	90.111	ENSFCAG00000027622	NCL	92	88.567	Felis_catus
ENSPPAG00000011619	NCL	100	91.857	ENSFDAG00000014291	NCL	62	91.176	Fukomys_damarensis
ENSPPAG00000011619	NCL	100	99.585	ENSGGOG00000004300	NCL	100	99.585	Gorilla_gorilla
ENSPPAG00000011619	NCL	91	77.077	ENSHGLG00000011069	-	55	92.273	Heterocephalus_glaber_female
ENSPPAG00000011619	NCL	88	66.588	ENSHGLG00000005133	-	93	74.825	Heterocephalus_glaber_female
ENSPPAG00000011619	NCL	100	91.857	ENSHGLG00000002031	-	92	86.524	Heterocephalus_glaber_female
ENSPPAG00000011619	NCL	84	82.482	ENSHGLG00100000745	-	86	81.592	Heterocephalus_glaber_male
ENSPPAG00000011619	NCL	100	91.531	ENSHGLG00100014537	-	100	87.097	Heterocephalus_glaber_male
ENSPPAG00000011619	NCL	95	82.888	ENSJJAG00000016165	Ncl	93	79.421	Jaculus_jaculus
ENSPPAG00000011619	NCL	91	75.709	ENSLAFG00000013061	NCL	85	83.803	Loxodonta_africana
ENSPPAG00000011619	NCL	100	99.017	ENSMFAG00000040385	NCL	100	99.017	Macaca_fascicularis
ENSPPAG00000011619	NCL	100	99.172	ENSMMUG00000018094	NCL	100	99.017	Macaca_mulatta
ENSPPAG00000011619	NCL	99	99.163	ENSMNEG00000023839	NCL	100	99.163	Macaca_nemestrina
ENSPPAG00000011619	NCL	100	99.156	ENSMLEG00000028935	NCL	100	99.156	Mandrillus_leucophaeus
ENSPPAG00000011619	NCL	100	91.011	ENSMICG00000002538	-	92	89.724	Microcebus_murinus
ENSPPAG00000011619	NCL	89	75.591	ENSMICG00000029975	-	86	82.979	Microcebus_murinus
ENSPPAG00000011619	NCL	91	86.275	MGP_CAROLIEiJ_G0014362	Ncl	61	83.220	Mus_caroli
ENSPPAG00000011619	NCL	91	86.275	ENSMUSG00000026234	Ncl	75	89.091	Mus_musculus
ENSPPAG00000011619	NCL	92	76.667	MGP_PahariEiJ_G0027599	Ncl	75	89.545	Mus_pahari
ENSPPAG00000011619	NCL	98	86.275	MGP_SPRETEiJ_G0015164	Ncl	75	89.091	Mus_spretus
ENSPPAG00000011619	NCL	92	84.954	ENSMLUG00000014547	NCL	62	93.197	Myotis_lucifugus
ENSPPAG00000011619	NCL	92	81.476	ENSNGAG00000002454	-	75	95.000	Nannospalax_galili
ENSPPAG00000011619	NCL	77	74.016	ENSNGAG00000006188	-	54	72.559	Nannospalax_galili
ENSPPAG00000011619	NCL	85	85.321	ENSNLEG00000014107	-	95	85.478	Nomascus_leucogenys
ENSPPAG00000011619	NCL	91	81.193	ENSODEG00000003281	-	91	81.555	Octodon_degus
ENSPPAG00000011619	NCL	87	86.939	ENSODEG00000002748	-	90	94.064	Octodon_degus
ENSPPAG00000011619	NCL	99	65.950	ENSODEG00000007803	-	90	64.337	Octodon_degus
ENSPPAG00000011619	NCL	100	69.087	ENSODEG00000002441	-	84	85.593	Octodon_degus
ENSPPAG00000011619	NCL	100	89.902	ENSOCUG00000004312	NCL	64	95.714	Oryctolagus_cuniculus
ENSPPAG00000011619	NCL	73	92.308	ENSOGAG00000027852	NCL	51	99.545	Otolemur_garnettii
ENSPPAG00000011619	NCL	74	73.228	ENSOARG00000004072	-	71	77.551	Ovis_aries
ENSPPAG00000011619	NCL	70	90.433	ENSOARG00000013710	-	73	89.116	Ovis_aries
ENSPPAG00000011619	NCL	91	80.303	ENSOARG00000020709	-	65	90.766	Ovis_aries
ENSPPAG00000011619	NCL	88	85.567	ENSOARG00000013270	-	100	90.110	Ovis_aries
ENSPPAG00000011619	NCL	100	93.160	ENSPPRG00000012603	NCL	92	88.702	Panthera_pardus
ENSPPAG00000011619	NCL	100	93.160	ENSPTIG00000010393	NCL	91	88.444	Panthera_tigris_altaica
ENSPPAG00000011619	NCL	100	99.793	ENSPTRG00000013025	NCL	100	99.793	Pan_troglodytes
ENSPPAG00000011619	NCL	100	99.017	ENSPANG00000010292	NCL	100	99.017	Papio_anubis
ENSPPAG00000011619	NCL	92	100.000	ENSPPYG00000013265	NCL	92	90.701	Pongo_abelii
ENSPPAG00000011619	NCL	92	90.812	ENSPCOG00000003051	-	91	89.587	Propithecus_coquereli
ENSPPAG00000011619	NCL	91	84.699	ENSPCOG00000004160	-	86	89.947	Propithecus_coquereli
ENSPPAG00000011619	NCL	92	89.346	ENSPVAG00000000297	NCL	61	93.197	Pteropus_vampyrus
ENSPPAG00000011619	NCL	92	79.305	ENSRNOG00000018273	Ncl	75	93.636	Rattus_norvegicus
ENSPPAG00000011619	NCL	100	92.707	ENSRBIG00000037525	-	63	95.011	Rhinopithecus_bieti
ENSPPAG00000011619	NCL	72	99.077	ENSRBIG00000035396	-	86	99.077	Rhinopithecus_bieti
ENSPPAG00000011619	NCL	99	97.647	ENSRROG00000036103	-	99	96.260	Rhinopithecus_roxellana
ENSPPAG00000011619	NCL	100	98.174	ENSRROG00000028756	-	100	98.326	Rhinopithecus_roxellana
ENSPPAG00000011619	NCL	100	87.296	ENSSBOG00000027549	-	98	90.888	Saimiri_boliviensis_boliviensis
ENSPPAG00000011619	NCL	87	74.163	ENSSBOG00000023094	-	88	75.566	Saimiri_boliviensis_boliviensis
ENSPPAG00000011619	NCL	92	94.181	ENSSBOG00000029193	-	92	94.334	Saimiri_boliviensis_boliviensis
ENSPPAG00000011619	NCL	86	91.176	ENSSSCG00000016275	NCL	92	85.135	Sus_scrofa
ENSPPAG00000011619	NCL	71	91.753	ENSTBEG00000001546	-	85	80.363	Tupaia_belangeri
ENSPPAG00000011619	NCL	81	77.679	ENSTBEG00000002469	-	66	82.286	Tupaia_belangeri
ENSPPAG00000011619	NCL	92	88.073	ENSTTRG00000009094	NCL	91	88.172	Tursiops_truncatus
ENSPPAG00000011619	NCL	84	92.834	ENSUAMG00000005639	NCL	100	93.042	Ursus_americanus
ENSPPAG00000011619	NCL	62	97.494	ENSUMAG00000015789	NCL	92	88.055	Ursus_maritimus
ENSPPAG00000011619	NCL	86	88.235	ENSVPAG00000001796	NCL	69	88.732	Vicugna_pacos
ENSPPAG00000011619	NCL	100	92.834	ENSVVUG00000025564	NCL	69	90.438	Vulpes_vulpes