EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000014081 (Gene tree)
Gene ID: 100974083
Gene Symbol: GAR1
Alias: -
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 8606 bases
Position: chr4:112879223-112887828
Accession: 100974083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000003351	Gar1	PF04410.14	1.1e-38	1	1
ENSPPAP00000003352	Gar1	PF04410.14	1.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000015440	GAR1-202	657	XM_003830017	ENSPPAP00000003352	218 (aa)	XP_003830065	A0A2R8ZEA1
ENSPPAT00000015429	GAR1-201	807	-	ENSPPAP00000003351	199 (aa)	-	A0A2R8ZKT6

Gene Model

Click here to download ENSPPAG00000014081's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000014081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000014081	GAR1	100	99.541	ENSG00000109534	GAR1	100	99.541	Homo_sapiens
ENSPPAG00000014081	GAR1	54	94.393	ENSAPOG00000019754	gar1	50	94.393	Acanthochromis_polyacanthus
ENSPPAG00000014081	GAR1	55	98.165	ENSAMEG00000004605	GAR1	53	98.165	Ailuropoda_melanoleuca
ENSPPAG00000014081	GAR1	54	94.393	ENSAOCG00000020947	gar1	50	94.393	Amphiprion_ocellaris
ENSPPAG00000014081	GAR1	54	94.393	ENSAPEG00000001676	gar1	50	94.393	Amphiprion_percula
ENSPPAG00000014081	GAR1	54	94.393	ENSATEG00000003733	gar1	50	94.393	Anabas_testudineus
ENSPPAG00000014081	GAR1	53	89.623	ENSAPLG00000010926	GAR1	60	88.889	Anas_platyrhynchos
ENSPPAG00000014081	GAR1	69	79.333	ENSACAG00000010031	GAR1	72	78.431	Anolis_carolinensis
ENSPPAG00000014081	GAR1	100	98.630	ENSANAG00000021608	GAR1	100	98.630	Aotus_nancymaae
ENSPPAG00000014081	GAR1	66	86.713	ENSACLG00000010029	gar1	65	85.517	Astatotilapia_calliptera
ENSPPAG00000014081	GAR1	65	86.822	ENSAMXG00000015752	gar1	61	83.453	Astyanax_mexicanus
ENSPPAG00000014081	GAR1	55	99.083	ENSBTAG00000000748	GAR1	52	99.083	Bos_taurus
ENSPPAG00000014081	GAR1	100	98.174	ENSCJAG00000004041	GAR1	100	98.174	Callithrix_jacchus
ENSPPAG00000014081	GAR1	53	99.057	ENSCAFG00020015566	GAR1	57	99.083	Canis_lupus_dingo
ENSPPAG00000014081	GAR1	70	90.654	ENSCHIG00000011049	-	63	84.211	Capra_hircus
ENSPPAG00000014081	GAR1	55	99.091	ENSCHIG00000016026	-	52	99.083	Capra_hircus
ENSPPAG00000014081	GAR1	100	94.977	ENSTSYG00000013668	-	51	100.000	Carlito_syrichta
ENSPPAG00000014081	GAR1	63	88.800	ENSTSYG00000026632	-	65	85.156	Carlito_syrichta
ENSPPAG00000014081	GAR1	55	99.091	ENSCPOG00000004216	GAR1	50	99.083	Cavia_porcellus
ENSPPAG00000014081	GAR1	100	98.630	ENSCCAG00000029372	GAR1	100	98.630	Cebus_capucinus
ENSPPAG00000014081	GAR1	100	99.083	ENSCATG00000021854	GAR1	100	99.083	Cercocebus_atys
ENSPPAG00000014081	GAR1	55	97.273	ENSCLAG00000005335	GAR1	99	96.250	Chinchilla_lanigera
ENSPPAG00000014081	GAR1	100	98.995	ENSCSAG00000003922	GAR1	100	98.995	Chlorocebus_sabaeus
ENSPPAG00000014081	GAR1	54	99.074	ENSCHOG00000007484	-	51	98.291	Choloepus_hoffmanni
ENSPPAG00000014081	GAR1	53	92.453	ENSCPBG00000004310	GAR1	55	90.826	Chrysemys_picta_bellii
ENSPPAG00000014081	GAR1	100	98.165	ENSCANG00000039262	GAR1	100	98.165	Colobus_angolensis_palliatus
ENSPPAG00000014081	GAR1	54	94.393	ENSCVAG00000002103	gar1	51	94.393	Cyprinodon_variegatus
ENSPPAG00000014081	GAR1	54	91.589	ENSDARG00000076526	gar1	67	81.333	Danio_rerio
ENSPPAG00000014081	GAR1	70	95.035	ENSDNOG00000037632	GAR1	72	95.035	Dasypus_novemcinctus
ENSPPAG00000014081	GAR1	72	92.361	ENSDORG00000000482	Gar1	50	96.330	Dipodomys_ordii
ENSPPAG00000014081	GAR1	55	98.182	ENSEASG00005004658	GAR1	50	98.165	Equus_asinus_asinus
ENSPPAG00000014081	GAR1	55	99.091	ENSECAG00000013624	GAR1	55	99.083	Equus_caballus
ENSPPAG00000014081	GAR1	55	99.083	ENSFCAG00000040791	-	52	99.083	Felis_catus
ENSPPAG00000014081	GAR1	93	56.213	ENSFCAG00000025841	-	57	63.866	Felis_catus
ENSPPAG00000014081	GAR1	53	93.396	ENSFALG00000006445	GAR1	50	92.593	Ficedula_albicollis
ENSPPAG00000014081	GAR1	56	91.892	ENSFHEG00000008068	gar1	50	93.458	Fundulus_heteroclitus
ENSPPAG00000014081	GAR1	52	93.269	ENSGAGG00000004393	GAR1	55	91.589	Gopherus_agassizii
ENSPPAG00000014081	GAR1	56	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSPPAG00000014081	GAR1	100	99.083	ENSGGOG00000008681	GAR1	100	99.083	Gorilla_gorilla
ENSPPAG00000014081	GAR1	54	98.131	ENSHGLG00000000493	GAR1	99	97.333	Heterocephalus_glaber_female
ENSPPAG00000014081	GAR1	68	84.444	ENSIPUG00000003194	gar1	51	91.589	Ictalurus_punctatus
ENSPPAG00000014081	GAR1	55	97.248	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSPPAG00000014081	GAR1	56	89.189	ENSKMAG00000010402	gar1	64	85.075	Kryptolebias_marmoratus
ENSPPAG00000014081	GAR1	53	87.736	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSPPAG00000014081	GAR1	58	82.677	ENSMFAG00000003572	-	63	82.677	Macaca_fascicularis
ENSPPAG00000014081	GAR1	100	99.083	ENSMFAG00000024592	GAR1	100	99.083	Macaca_fascicularis
ENSPPAG00000014081	GAR1	100	99.083	ENSMMUG00000021225	GAR1	100	99.083	Macaca_mulatta
ENSPPAG00000014081	GAR1	100	99.083	ENSMNEG00000042594	GAR1	100	99.083	Macaca_nemestrina
ENSPPAG00000014081	GAR1	99	98.611	ENSMLEG00000002496	GAR1	99	98.611	Mandrillus_leucophaeus
ENSPPAG00000014081	GAR1	66	86.713	ENSMZEG00005001281	gar1	65	85.517	Maylandia_zebra
ENSPPAG00000014081	GAR1	55	96.330	ENSMAUG00000016788	Gar1	99	93.590	Mesocricetus_auratus
ENSPPAG00000014081	GAR1	56	98.214	ENSMICG00000003326	GAR1	50	99.083	Microcebus_murinus
ENSPPAG00000014081	GAR1	55	95.413	ENSMOCG00000001340	Gar1	99	94.872	Microtus_ochrogaster
ENSPPAG00000014081	GAR1	54	95.327	ENSMMOG00000004156	gar1	52	95.327	Mola_mola
ENSPPAG00000014081	GAR1	75	75.168	ENSMALG00000009672	gar1	50	93.458	Monopterus_albus
ENSPPAG00000014081	GAR1	55	96.330	MGP_CAROLIEiJ_G0025627	Gar1	99	94.872	Mus_caroli
ENSPPAG00000014081	GAR1	55	96.364	ENSMUSG00000028010	Gar1	99	94.872	Mus_musculus
ENSPPAG00000014081	GAR1	92	95.213	MGP_PahariEiJ_G0027076	Gar1	100	95.213	Mus_pahari
ENSPPAG00000014081	GAR1	55	96.364	MGP_SPRETEiJ_G0026580	Gar1	99	94.872	Mus_spretus
ENSPPAG00000014081	GAR1	55	99.083	ENSMPUG00000008615	GAR1	52	99.083	Mustela_putorius_furo
ENSPPAG00000014081	GAR1	97	92.574	ENSMLUG00000003776	GAR1	90	92.574	Myotis_lucifugus
ENSPPAG00000014081	GAR1	55	98.182	ENSNGAG00000008268	Gar1	92	98.592	Nannospalax_galili
ENSPPAG00000014081	GAR1	100	97.706	ENSNLEG00000016578	GAR1	100	97.706	Nomascus_leucogenys
ENSPPAG00000014081	GAR1	56	83.784	ENSNLEG00000034282	-	55	83.486	Nomascus_leucogenys
ENSPPAG00000014081	GAR1	54	98.131	ENSODEG00000011083	GAR1	56	97.248	Octodon_degus
ENSPPAG00000014081	GAR1	55	99.083	ENSOCUG00000003901	GAR1	51	99.083	Oryctolagus_cuniculus
ENSPPAG00000014081	GAR1	54	94.393	ENSORLG00000020583	gar1	69	82.119	Oryzias_latipes
ENSPPAG00000014081	GAR1	54	94.393	ENSORLG00020008602	gar1	69	82.119	Oryzias_latipes_hni
ENSPPAG00000014081	GAR1	54	94.393	ENSORLG00015017643	gar1	69	82.119	Oryzias_latipes_hsok
ENSPPAG00000014081	GAR1	100	95.000	ENSOGAG00000004693	GAR1	51	99.083	Otolemur_garnettii
ENSPPAG00000014081	GAR1	55	99.083	ENSOARG00000004910	GAR1	52	99.083	Ovis_aries
ENSPPAG00000014081	GAR1	55	99.083	ENSPPRG00000023697	GAR1	52	99.083	Panthera_pardus
ENSPPAG00000014081	GAR1	98	92.893	ENSPTIG00000021565	GAR1	52	99.083	Panthera_tigris_altaica
ENSPPAG00000014081	GAR1	100	99.083	ENSPTRG00000016364	GAR1	100	99.083	Pan_troglodytes
ENSPPAG00000014081	GAR1	87	81.651	ENSPTRG00000049340	-	71	75.510	Pan_troglodytes
ENSPPAG00000014081	GAR1	54	86.111	ENSPANG00000033062	-	59	73.973	Papio_anubis
ENSPPAG00000014081	GAR1	100	99.083	ENSPANG00000000639	GAR1	100	99.083	Papio_anubis
ENSPPAG00000014081	GAR1	53	92.453	ENSPSIG00000002970	GAR1	50	90.826	Pelodiscus_sinensis
ENSPPAG00000014081	GAR1	55	96.330	ENSPEMG00000015838	Gar1	99	93.590	Peromyscus_maniculatus_bairdii
ENSPPAG00000014081	GAR1	64	87.857	ENSPFOG00000024155	gar1	69	83.562	Poecilia_formosa
ENSPPAG00000014081	GAR1	64	87.857	ENSPLAG00000015056	gar1	69	83.562	Poecilia_latipinna
ENSPPAG00000014081	GAR1	54	94.393	ENSPMEG00000009320	gar1	51	94.393	Poecilia_mexicana
ENSPPAG00000014081	GAR1	94	99.468	ENSPPYG00000014996	GAR1	87	99.468	Pongo_abelii
ENSPPAG00000014081	GAR1	54	100.000	ENSPCOG00000027049	GAR1	56	100.000	Propithecus_coquereli
ENSPPAG00000014081	GAR1	94	93.878	ENSRNOG00000061146	Gar1	100	96.491	Rattus_norvegicus
ENSPPAG00000014081	GAR1	100	98.624	ENSRBIG00000019547	GAR1	100	98.624	Rhinopithecus_bieti
ENSPPAG00000014081	GAR1	56	82.143	ENSRBIG00000042411	-	53	81.651	Rhinopithecus_bieti
ENSPPAG00000014081	GAR1	100	99.083	ENSRROG00000028454	GAR1	100	99.083	Rhinopithecus_roxellana
ENSPPAG00000014081	GAR1	56	82.143	ENSRROG00000044348	-	52	81.651	Rhinopithecus_roxellana
ENSPPAG00000014081	GAR1	100	95.475	ENSSBOG00000024785	GAR1	100	95.475	Saimiri_boliviensis_boliviensis
ENSPPAG00000014081	GAR1	54	93.458	ENSSLDG00000023264	gar1	50	93.458	Seriola_lalandi_dorsalis
ENSPPAG00000014081	GAR1	53	93.396	ENSSPUG00000008707	GAR1	61	91.743	Sphenodon_punctatus
ENSPPAG00000014081	GAR1	84	88.690	ENSSSCG00000009137	GAR1	54	99.083	Sus_scrofa
ENSPPAG00000014081	GAR1	50	89.899	ENSTGUG00000004185	GAR1	67	89.899	Taeniopygia_guttata
ENSPPAG00000014081	GAR1	54	90.654	ENSTRUG00000020580	gar1	51	90.654	Takifugu_rubripes
ENSPPAG00000014081	GAR1	52	93.269	ENSTNIG00000013023	gar1	61	93.458	Tetraodon_nigroviridis
ENSPPAG00000014081	GAR1	86	93.122	ENSUAMG00000005652	GAR1	94	93.122	Ursus_americanus
ENSPPAG00000014081	GAR1	55	99.083	ENSUMAG00000000776	GAR1	53	99.083	Ursus_maritimus
ENSPPAG00000014081	GAR1	55	99.083	ENSVVUG00000017612	GAR1	56	99.083	Vulpes_vulpes