EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000014118 (Gene tree)
Gene ID: 100983444
Gene Symbol: APOBEC3C
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3C
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 6338 bases
Position: chr22:37743388-37749725
Accession: 100983444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000003356	APOBEC_N	PF08210.11	2.4e-58	1	1
ENSPPAP00000003356	APOBEC_C	PF05240.14	1.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000015461	APOBEC3C-201	2812	XM_008975105	ENSPPAP00000003356	190 (aa)	XP_008973353	A0A2R8ZKU1

Gene Model

Click here to download ENSPPAG00000014118's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000014118's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000014118	APOBEC3C	91	43.678	ENSPPAG00000038169	AICDA	86	43.678
ENSPPAG00000014118	APOBEC3C	100	51.053	ENSPPAG00000009288	APOBEC3B	98	51.053
ENSPPAG00000014118	APOBEC3C	95	45.070	ENSPPAG00000033277	-	79	45.070
ENSPPAG00000014118	APOBEC3C	68	40.299	ENSPPAG00000036522	APOBEC3H	73	40.299
ENSPPAG00000014118	APOBEC3C	100	78.421	ENSPPAG00000028218	-	100	78.421
ENSPPAG00000014118	APOBEC3C	93	31.522	ENSPPAG00000035598	APOBEC2	77	32.597

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000014118	APOBEC3C	100	97.895	ENSG00000244509	APOBEC3C	100	97.895	Homo_sapiens
ENSPPAG00000014118	APOBEC3C	100	78.947	ENSG00000243811	APOBEC3D	100	78.947	Homo_sapiens
ENSPPAG00000014118	APOBEC3C	100	79.032	ENSG00000128394	APOBEC3F	100	79.032	Homo_sapiens
ENSPPAG00000014118	APOBEC3C	100	69.474	ENSANAG00000030088	-	97	68.817	Aotus_nancymaae
ENSPPAG00000014118	APOBEC3C	69	68.939	ENSCJAG00000015317	-	100	68.939	Callithrix_jacchus
ENSPPAG00000014118	APOBEC3C	98	46.316	ENSCAFG00020002615	-	99	46.316	Canis_lupus_dingo
ENSPPAG00000014118	APOBEC3C	96	52.459	ENSTSYG00000028254	-	99	52.459	Carlito_syrichta
ENSPPAG00000014118	APOBEC3C	96	48.634	ENSTSYG00000030036	-	99	48.634	Carlito_syrichta
ENSPPAG00000014118	APOBEC3C	100	51.852	ENSTSYG00000034260	-	98	51.852	Carlito_syrichta
ENSPPAG00000014118	APOBEC3C	98	68.280	ENSCCAG00000030932	-	84	68.280	Cebus_capucinus
ENSPPAG00000014118	APOBEC3C	100	78.231	ENSCATG00000033502	-	100	76.344	Cercocebus_atys
ENSPPAG00000014118	APOBEC3C	100	82.632	ENSCATG00000043226	APOBEC3C	100	82.632	Cercocebus_atys
ENSPPAG00000014118	APOBEC3C	100	75.269	ENSCSAG00000006382	APOBEC3F	100	75.269	Chlorocebus_sabaeus
ENSPPAG00000014118	APOBEC3C	100	83.158	ENSCSAG00000006402	APOBEC3C	100	83.158	Chlorocebus_sabaeus
ENSPPAG00000014118	APOBEC3C	100	73.656	ENSCANG00000031957	-	100	73.656	Colobus_angolensis_palliatus
ENSPPAG00000014118	APOBEC3C	100	77.957	ENSCANG00000032904	-	100	77.957	Colobus_angolensis_palliatus
ENSPPAG00000014118	APOBEC3C	100	71.505	ENSCANG00000033269	-	99	73.370	Colobus_angolensis_palliatus
ENSPPAG00000014118	APOBEC3C	100	83.158	ENSCANG00000039177	APOBEC3C	100	83.158	Colobus_angolensis_palliatus
ENSPPAG00000014118	APOBEC3C	97	39.785	ENSDNOG00000044642	-	99	39.785	Dasypus_novemcinctus
ENSPPAG00000014118	APOBEC3C	100	43.627	ENSEASG00005018641	-	100	43.627	Equus_asinus_asinus
ENSPPAG00000014118	APOBEC3C	98	47.849	ENSECAG00000006071	-	100	47.849	Equus_caballus
ENSPPAG00000014118	APOBEC3C	100	79.570	ENSGGOG00000038678	APOBEC3F	100	79.570	Gorilla_gorilla
ENSPPAG00000014118	APOBEC3C	100	87.895	ENSGGOG00000036587	-	100	87.895	Gorilla_gorilla
ENSPPAG00000014118	APOBEC3C	98	45.213	ENSHGLG00000017315	-	85	43.316	Heterocephalus_glaber_female
ENSPPAG00000014118	APOBEC3C	98	45.213	ENSHGLG00100003105	-	94	45.213	Heterocephalus_glaber_male
ENSPPAG00000014118	APOBEC3C	100	82.632	ENSMFAG00000016792	APOBEC3C	100	82.632	Macaca_fascicularis
ENSPPAG00000014118	APOBEC3C	100	77.419	ENSMFAG00000002331	-	100	77.419	Macaca_fascicularis
ENSPPAG00000014118	APOBEC3C	100	74.194	ENSMFAG00000004037	APOBEC3F	100	74.194	Macaca_fascicularis
ENSPPAG00000014118	APOBEC3C	97	83.696	ENSMMUG00000004018	APOBEC3C	95	83.696	Macaca_mulatta
ENSPPAG00000014118	APOBEC3C	100	78.495	ENSMMUG00000004017	APOBEC3F	100	78.495	Macaca_mulatta
ENSPPAG00000014118	APOBEC3C	100	77.419	ENSMNEG00000043316	APOBEC3D	100	77.419	Macaca_nemestrina
ENSPPAG00000014118	APOBEC3C	100	84.211	ENSMNEG00000045196	APOBEC3C	100	84.211	Macaca_nemestrina
ENSPPAG00000014118	APOBEC3C	100	82.632	ENSMLEG00000036992	APOBEC3C	100	82.632	Mandrillus_leucophaeus
ENSPPAG00000014118	APOBEC3C	100	74.194	ENSMLEG00000029642	APOBEC3F	100	74.194	Mandrillus_leucophaeus
ENSPPAG00000014118	APOBEC3C	99	53.723	ENSMICG00000042615	-	89	53.723	Microcebus_murinus
ENSPPAG00000014118	APOBEC3C	97	46.073	ENSMLUG00000023676	-	99	46.073	Myotis_lucifugus
ENSPPAG00000014118	APOBEC3C	100	82.632	ENSNLEG00000028392	APOBEC3C	100	82.632	Nomascus_leucogenys
ENSPPAG00000014118	APOBEC3C	100	63.684	ENSNLEG00000035811	-	100	63.684	Nomascus_leucogenys
ENSPPAG00000014118	APOBEC3C	98	48.128	ENSOGAG00000032498	-	99	48.128	Otolemur_garnettii
ENSPPAG00000014118	APOBEC3C	98	42.781	ENSOGAG00000030300	-	97	42.781	Otolemur_garnettii
ENSPPAG00000014118	APOBEC3C	98	45.251	ENSOGAG00000033404	-	100	45.251	Otolemur_garnettii
ENSPPAG00000014118	APOBEC3C	97	47.872	ENSPPRG00000003726	-	98	47.872	Panthera_pardus
ENSPPAG00000014118	APOBEC3C	100	78.495	ENSPTRG00000014385	APOBEC3C	100	78.495	Pan_troglodytes
ENSPPAG00000014118	APOBEC3C	100	78.421	ENSPTRG00000041588	APOBEC3D	100	78.421	Pan_troglodytes
ENSPPAG00000014118	APOBEC3C	100	82.105	ENSPANG00000010775	APOBEC3F	100	82.105	Papio_anubis
ENSPPAG00000014118	APOBEC3C	100	86.316	ENSPPYG00000011832	APOBEC3C	100	86.316	Pongo_abelii
ENSPPAG00000014118	APOBEC3C	67	56.250	ENSPCOG00000022067	-	97	56.250	Propithecus_coquereli
ENSPPAG00000014118	APOBEC3C	66	57.143	ENSPCOG00000018072	-	95	57.143	Propithecus_coquereli
ENSPPAG00000014118	APOBEC3C	64	50.000	ENSPVAG00000009461	-	50	50.000	Pteropus_vampyrus
ENSPPAG00000014118	APOBEC3C	100	75.556	ENSRBIG00000042297	-	99	77.707	Rhinopithecus_bieti
ENSPPAG00000014118	APOBEC3C	100	82.632	ENSRBIG00000030323	-	100	82.632	Rhinopithecus_bieti
ENSPPAG00000014118	APOBEC3C	100	77.419	ENSRBIG00000030834	-	100	77.419	Rhinopithecus_bieti
ENSPPAG00000014118	APOBEC3C	100	82.632	ENSRROG00000029045	APOBEC3C	100	82.632	Rhinopithecus_roxellana
ENSPPAG00000014118	APOBEC3C	100	75.000	ENSRROG00000029996	-	100	75.000	Rhinopithecus_roxellana
ENSPPAG00000014118	APOBEC3C	100	76.882	ENSRROG00000028557	-	100	76.882	Rhinopithecus_roxellana
ENSPPAG00000014118	APOBEC3C	100	69.474	ENSSBOG00000032780	-	100	69.474	Saimiri_boliviensis_boliviensis
ENSPPAG00000014118	APOBEC3C	85	49.068	ENSUAMG00000004433	-	89	49.068	Ursus_americanus
ENSPPAG00000014118	APOBEC3C	86	50.000	ENSUMAG00000014441	-	76	50.000	Ursus_maritimus
ENSPPAG00000014118	APOBEC3C	77	49.664	ENSVVUG00000014628	-	91	49.315	Vulpes_vulpes