EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000018410 (Gene tree)
Gene ID: 100991865
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 34741 bases
Position: chr8:96944588-96979328
Accession: 100991865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000004379	POP1	PF06978.11	3.1e-38	1	2
ENSPPAP00000004379	POP1	PF06978.11	3.1e-38	2	2
ENSPPAP00000004379	POPLD	PF08170.12	1.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000020177	POP1-201	3072	XM_003821691	ENSPPAP00000004379	1023 (aa)	XP_003821739	A0A2R8ZHB6

Gene Model

Click here to download ENSPPAG00000018410's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03008	Ribosome biogenesis in eukaryotes	KEGG
pps03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000018410's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000018410	POP1	100	99.316	ENSG00000104356	POP1	100	100.000	Homo_sapiens
ENSPPAG00000018410	POP1	100	48.771	ENSAPOG00000008198	pop1	100	48.677	Acanthochromis_polyacanthus
ENSPPAG00000018410	POP1	100	80.971	ENSAMEG00000000556	POP1	100	80.971	Ailuropoda_melanoleuca
ENSPPAG00000018410	POP1	90	49.894	ENSACIG00000004169	POP1	100	46.851	Amphilophus_citrinellus
ENSPPAG00000018410	POP1	100	47.547	ENSAOCG00000010991	pop1	100	47.588	Amphiprion_ocellaris
ENSPPAG00000018410	POP1	91	47.889	ENSAPEG00000007607	pop1	96	48.244	Amphiprion_percula
ENSPPAG00000018410	POP1	100	46.125	ENSATEG00000024814	POP1	100	46.516	Anabas_testudineus
ENSPPAG00000018410	POP1	92	63.512	ENSAPLG00000014418	POP1	100	63.512	Anas_platyrhynchos
ENSPPAG00000018410	POP1	100	56.455	ENSACAG00000016083	POP1	100	56.455	Anolis_carolinensis
ENSPPAG00000018410	POP1	89	93.769	ENSANAG00000026360	POP1	100	93.769	Aotus_nancymaae
ENSPPAG00000018410	POP1	93	53.542	ENSACLG00000010951	pop1	100	47.970	Astatotilapia_calliptera
ENSPPAG00000018410	POP1	100	45.914	ENSAMXG00000014483	POP1	100	45.262	Astyanax_mexicanus
ENSPPAG00000018410	POP1	100	80.859	ENSBTAG00000012596	POP1	100	80.762	Bos_taurus
ENSPPAG00000018410	POP1	100	93.164	ENSCJAG00000015567	POP1	100	93.164	Callithrix_jacchus
ENSPPAG00000018410	POP1	100	81.329	ENSCAFG00000000469	POP1	100	81.329	Canis_familiaris
ENSPPAG00000018410	POP1	100	82.600	ENSCAFG00020026765	POP1	100	82.600	Canis_lupus_dingo
ENSPPAG00000018410	POP1	100	81.073	ENSCHIG00000017066	POP1	100	80.878	Capra_hircus
ENSPPAG00000018410	POP1	100	86.914	ENSTSYG00000003097	POP1	100	86.914	Carlito_syrichta
ENSPPAG00000018410	POP1	100	78.328	ENSCAPG00000007251	POP1	100	78.328	Cavia_aperea
ENSPPAG00000018410	POP1	100	81.152	ENSCPOG00000002901	POP1	100	81.152	Cavia_porcellus
ENSPPAG00000018410	POP1	100	92.969	ENSCCAG00000018939	POP1	100	92.969	Cebus_capucinus
ENSPPAG00000018410	POP1	100	96.973	ENSCATG00000040916	POP1	100	96.973	Cercocebus_atys
ENSPPAG00000018410	POP1	100	82.422	ENSCLAG00000007208	POP1	97	82.422	Chinchilla_lanigera
ENSPPAG00000018410	POP1	90	96.204	ENSCSAG00000012340	POP1	99	96.204	Chlorocebus_sabaeus
ENSPPAG00000018410	POP1	95	80.738	ENSCHOG00000011432	POP1	100	80.328	Choloepus_hoffmanni
ENSPPAG00000018410	POP1	100	65.272	ENSCPBG00000006373	POP1	100	65.272	Chrysemys_picta_bellii
ENSPPAG00000018410	POP1	82	38.132	ENSCING00000008323	-	90	36.396	Ciona_intestinalis
ENSPPAG00000018410	POP1	100	96.875	ENSCANG00000001647	POP1	100	96.875	Colobus_angolensis_palliatus
ENSPPAG00000018410	POP1	100	76.878	ENSCGRG00001017308	Pop1	100	76.367	Cricetulus_griseus_chok1gshd
ENSPPAG00000018410	POP1	100	71.317	ENSCGRG00000010824	Pop1	100	70.801	Cricetulus_griseus_crigri
ENSPPAG00000018410	POP1	100	46.066	ENSCSEG00000008737	POP1	100	46.351	Cynoglossus_semilaevis
ENSPPAG00000018410	POP1	100	47.092	ENSCVAG00000022248	pop1	100	46.851	Cyprinodon_variegatus
ENSPPAG00000018410	POP1	100	78.134	ENSDNOG00000019974	POP1	100	78.134	Dasypus_novemcinctus
ENSPPAG00000018410	POP1	100	72.683	ENSDORG00000015384	Pop1	100	72.195	Dipodomys_ordii
ENSPPAG00000018410	POP1	61	32.437	FBgn0026702	l(1)G0045	70	32.334	Drosophila_melanogaster
ENSPPAG00000018410	POP1	89	71.228	ENSETEG00000007839	POP1	88	71.228	Echinops_telfairi
ENSPPAG00000018410	POP1	100	84.375	ENSEASG00005003189	POP1	98	84.375	Equus_asinus_asinus
ENSPPAG00000018410	POP1	100	84.375	ENSECAG00000024236	POP1	100	84.375	Equus_caballus
ENSPPAG00000018410	POP1	67	77.778	ENSEEUG00000003050	-	70	77.778	Erinaceus_europaeus
ENSPPAG00000018410	POP1	100	47.533	ENSELUG00000003526	pop1	100	47.104	Esox_lucius
ENSPPAG00000018410	POP1	100	84.180	ENSFCAG00000002168	POP1	100	84.180	Felis_catus
ENSPPAG00000018410	POP1	100	60.676	ENSFALG00000005711	POP1	100	60.811	Ficedula_albicollis
ENSPPAG00000018410	POP1	100	82.520	ENSFDAG00000017068	POP1	100	82.520	Fukomys_damarensis
ENSPPAG00000018410	POP1	100	47.283	ENSFHEG00000019518	pop1	100	47.569	Fundulus_heteroclitus
ENSPPAG00000018410	POP1	93	45.990	ENSGMOG00000000659	POP1	98	45.990	Gadus_morhua
ENSPPAG00000018410	POP1	100	47.738	ENSGAFG00000019770	POP1	100	47.206	Gambusia_affinis
ENSPPAG00000018410	POP1	100	47.053	ENSGACG00000003499	pop1	100	46.673	Gasterosteus_aculeatus
ENSPPAG00000018410	POP1	100	63.953	ENSGAGG00000011737	POP1	98	64.147	Gopherus_agassizii
ENSPPAG00000018410	POP1	100	99.023	ENSGGOG00000003176	POP1	100	99.023	Gorilla_gorilla
ENSPPAG00000018410	POP1	100	47.834	ENSHBUG00000021583	pop1	100	47.781	Haplochromis_burtoni
ENSPPAG00000018410	POP1	100	82.129	ENSHGLG00000006029	POP1	100	82.129	Heterocephalus_glaber_female
ENSPPAG00000018410	POP1	100	82.129	ENSHGLG00100016879	POP1	100	82.129	Heterocephalus_glaber_male
ENSPPAG00000018410	POP1	90	49.786	ENSHCOG00000013888	pop1	96	49.786	Hippocampus_comes
ENSPPAG00000018410	POP1	100	44.918	ENSIPUG00000018336	pop1	91	62.651	Ictalurus_punctatus
ENSPPAG00000018410	POP1	100	83.594	ENSSTOG00000011455	POP1	97	83.594	Ictidomys_tridecemlineatus
ENSPPAG00000018410	POP1	100	78.418	ENSJJAG00000013325	Pop1	100	78.418	Jaculus_jaculus
ENSPPAG00000018410	POP1	100	46.788	ENSKMAG00000001346	POP1	100	46.692	Kryptolebias_marmoratus
ENSPPAG00000018410	POP1	89	48.488	ENSLBEG00000024457	POP1	95	47.780	Labrus_bergylta
ENSPPAG00000018410	POP1	93	56.080	ENSLACG00000012498	POP1	99	55.944	Latimeria_chalumnae
ENSPPAG00000018410	POP1	100	51.292	ENSLOCG00000009817	POP1	100	50.913	Lepisosteus_oculatus
ENSPPAG00000018410	POP1	100	83.658	ENSLAFG00000010770	POP1	100	83.658	Loxodonta_africana
ENSPPAG00000018410	POP1	100	96.680	ENSMFAG00000000347	POP1	100	96.680	Macaca_fascicularis
ENSPPAG00000018410	POP1	100	96.094	ENSMNEG00000036870	POP1	100	96.094	Macaca_nemestrina
ENSPPAG00000018410	POP1	100	96.582	ENSMLEG00000034986	POP1	100	96.582	Mandrillus_leucophaeus
ENSPPAG00000018410	POP1	100	47.309	ENSMAMG00000004040	pop1	100	47.309	Mastacembelus_armatus
ENSPPAG00000018410	POP1	100	48.023	ENSMZEG00005025448	pop1	100	47.970	Maylandia_zebra
ENSPPAG00000018410	POP1	100	58.120	ENSMGAG00000012167	POP1	100	58.751	Meleagris_gallopavo
ENSPPAG00000018410	POP1	100	76.780	ENSMAUG00000017537	Pop1	100	76.780	Mesocricetus_auratus
ENSPPAG00000018410	POP1	100	87.695	ENSMICG00000004361	POP1	100	87.695	Microcebus_murinus
ENSPPAG00000018410	POP1	100	75.488	ENSMOCG00000006356	Pop1	100	76.367	Microtus_ochrogaster
ENSPPAG00000018410	POP1	100	44.801	ENSMMOG00000018242	pop1	100	44.801	Mola_mola
ENSPPAG00000018410	POP1	100	70.019	ENSMODG00000006561	POP1	100	69.826	Monodelphis_domestica
ENSPPAG00000018410	POP1	93	52.097	ENSMALG00000012621	POP1	100	47.637	Monopterus_albus
ENSPPAG00000018410	POP1	100	76.562	MGP_CAROLIEiJ_G0019726	Pop1	100	76.562	Mus_caroli
ENSPPAG00000018410	POP1	100	77.051	ENSMUSG00000022325	Pop1	100	77.051	Mus_musculus
ENSPPAG00000018410	POP1	100	76.833	MGP_PahariEiJ_G0019735	Pop1	100	76.833	Mus_pahari
ENSPPAG00000018410	POP1	100	76.465	MGP_SPRETEiJ_G0020622	Pop1	100	76.465	Mus_spretus
ENSPPAG00000018410	POP1	100	82.393	ENSMPUG00000015250	POP1	100	81.518	Mustela_putorius_furo
ENSPPAG00000018410	POP1	100	77.680	ENSMLUG00000010204	POP1	100	77.485	Myotis_lucifugus
ENSPPAG00000018410	POP1	100	82.324	ENSNGAG00000001582	Pop1	100	82.324	Nannospalax_galili
ENSPPAG00000018410	POP1	89	48.180	ENSNBRG00000002356	pop1	94	48.514	Neolamprologus_brichardi
ENSPPAG00000018410	POP1	100	97.168	ENSNLEG00000002541	POP1	100	97.168	Nomascus_leucogenys
ENSPPAG00000018410	POP1	93	61.169	ENSMEUG00000003118	POP1	98	61.169	Notamacropus_eugenii
ENSPPAG00000018410	POP1	100	79.297	ENSOPRG00000007667	POP1	100	79.199	Ochotona_princeps
ENSPPAG00000018410	POP1	100	80.214	ENSODEG00000003984	POP1	100	80.214	Octodon_degus
ENSPPAG00000018410	POP1	100	48.338	ENSONIG00000016445	pop1	100	48.393	Oreochromis_niloticus
ENSPPAG00000018410	POP1	59	69.512	ENSOANG00000001278	-	94	70.122	Ornithorhynchus_anatinus
ENSPPAG00000018410	POP1	100	82.021	ENSOCUG00000017400	POP1	100	82.021	Oryctolagus_cuniculus
ENSPPAG00000018410	POP1	100	47.363	ENSORLG00000002839	pop1	100	47.267	Oryzias_latipes
ENSPPAG00000018410	POP1	90	50.000	ENSORLG00020022450	POP1	96	49.575	Oryzias_latipes_hni
ENSPPAG00000018410	POP1	100	47.889	ENSORLG00015012746	POP1	100	47.939	Oryzias_latipes_hsok
ENSPPAG00000018410	POP1	100	47.476	ENSOMEG00000006915	pop1	99	47.144	Oryzias_melastigma
ENSPPAG00000018410	POP1	100	84.863	ENSOGAG00000001466	POP1	100	84.863	Otolemur_garnettii
ENSPPAG00000018410	POP1	100	84.098	ENSPPRG00000005002	POP1	100	84.098	Panthera_pardus
ENSPPAG00000018410	POP1	100	84.488	ENSPTIG00000016527	POP1	100	84.488	Panthera_tigris_altaica
ENSPPAG00000018410	POP1	100	99.414	ENSPTRG00000020458	POP1	100	99.414	Pan_troglodytes
ENSPPAG00000018410	POP1	100	96.481	ENSPANG00000009704	POP1	100	96.481	Papio_anubis
ENSPPAG00000018410	POP1	100	49.521	ENSPKIG00000016325	POP1	100	48.944	Paramormyrops_kingsleyae
ENSPPAG00000018410	POP1	100	63.531	ENSPSIG00000012343	POP1	100	63.531	Pelodiscus_sinensis
ENSPPAG00000018410	POP1	90	49.359	ENSPMGG00000022253	POP1	95	49.626	Periophthalmus_magnuspinnatus
ENSPPAG00000018410	POP1	99	75.694	ENSPEMG00000023633	Pop1	100	75.694	Peromyscus_maniculatus_bairdii
ENSPPAG00000018410	POP1	90	44.245	ENSPMAG00000003209	POP1	100	43.987	Petromyzon_marinus
ENSPPAG00000018410	POP1	100	68.340	ENSPCIG00000012216	POP1	100	68.340	Phascolarctos_cinereus
ENSPPAG00000018410	POP1	100	48.944	ENSPFOG00000012490	POP1	100	48.412	Poecilia_formosa
ENSPPAG00000018410	POP1	100	48.799	ENSPLAG00000004646	POP1	100	48.266	Poecilia_latipinna
ENSPPAG00000018410	POP1	100	48.851	ENSPMEG00000019592	POP1	100	48.319	Poecilia_mexicana
ENSPPAG00000018410	POP1	100	48.846	ENSPREG00000020951	POP1	100	48.508	Poecilia_reticulata
ENSPPAG00000018410	POP1	100	97.852	ENSPPYG00000018777	POP1	100	97.852	Pongo_abelii
ENSPPAG00000018410	POP1	100	76.683	ENSPCAG00000016662	POP1	100	75.805	Procavia_capensis
ENSPPAG00000018410	POP1	100	88.281	ENSPCOG00000019420	POP1	100	88.281	Propithecus_coquereli
ENSPPAG00000018410	POP1	100	82.634	ENSPVAG00000014468	POP1	100	82.634	Pteropus_vampyrus
ENSPPAG00000018410	POP1	89	49.032	ENSPNYG00000004476	pop1	99	47.972	Pundamilia_nyererei
ENSPPAG00000018410	POP1	100	45.638	ENSPNAG00000000265	pop1	100	43.710	Pygocentrus_nattereri
ENSPPAG00000018410	POP1	100	77.832	ENSRNOG00000005243	Pop1	100	77.832	Rattus_norvegicus
ENSPPAG00000018410	POP1	100	96.875	ENSRBIG00000007996	POP1	100	96.875	Rhinopithecus_bieti
ENSPPAG00000018410	POP1	100	97.070	ENSRROG00000012334	POP1	100	97.070	Rhinopithecus_roxellana
ENSPPAG00000018410	POP1	99	93.972	ENSSBOG00000020830	POP1	100	93.972	Saimiri_boliviensis_boliviensis
ENSPPAG00000018410	POP1	100	69.022	ENSSHAG00000000296	POP1	100	69.022	Sarcophilus_harrisii
ENSPPAG00000018410	POP1	100	47.278	ENSSFOG00015007429	pop1	99	46.991	Scleropages_formosus
ENSPPAG00000018410	POP1	87	53.433	ENSSMAG00000010467	POP1	99	48.936	Scophthalmus_maximus
ENSPPAG00000018410	POP1	100	46.698	ENSSDUG00000007817	POP1	100	46.987	Seriola_dumerili
ENSPPAG00000018410	POP1	100	46.975	ENSSLDG00000012565	POP1	100	47.830	Seriola_lalandi_dorsalis
ENSPPAG00000018410	POP1	100	59.748	ENSSPUG00000003550	-	100	60.116	Sphenodon_punctatus
ENSPPAG00000018410	POP1	100	47.241	ENSSPAG00000014955	pop1	100	47.338	Stegastes_partitus
ENSPPAG00000018410	POP1	100	82.227	ENSSSCG00000006078	POP1	100	82.227	Sus_scrofa
ENSPPAG00000018410	POP1	92	57.672	ENSTGUG00000012011	-	100	57.672	Taeniopygia_guttata
ENSPPAG00000018410	POP1	91	48.414	ENSTRUG00000010856	pop1	94	48.414	Takifugu_rubripes
ENSPPAG00000018410	POP1	92	49.068	ENSTNIG00000013297	pop1	99	48.965	Tetraodon_nigroviridis
ENSPPAG00000018410	POP1	95	81.576	ENSTBEG00000014214	POP1	100	81.576	Tupaia_belangeri
ENSPPAG00000018410	POP1	100	80.664	ENSTTRG00000016071	POP1	100	80.664	Tursiops_truncatus
ENSPPAG00000018410	POP1	99	78.677	ENSUAMG00000017309	POP1	100	78.776	Ursus_americanus
ENSPPAG00000018410	POP1	91	90.283	ENSUMAG00000016952	POP1	100	90.283	Ursus_maritimus
ENSPPAG00000018410	POP1	82	88.686	ENSVPAG00000008278	POP1	82	88.686	Vicugna_pacos
ENSPPAG00000018410	POP1	100	82.698	ENSVVUG00000010994	POP1	100	82.698	Vulpes_vulpes
ENSPPAG00000018410	POP1	100	43.590	ENSXCOG00000017043	POP1	100	43.308	Xiphophorus_couchianus
ENSPPAG00000018410	POP1	100	47.935	ENSXMAG00000002472	POP1	100	47.399	Xiphophorus_maculatus