EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000020990 (Gene tree)
Gene ID: 112437902
Gene Symbol: GPATCH1
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 51089 bases
Position: chr19:38749078-38800166
Accession: 112437902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000005039	DUF1604	PF07713.13	8.8e-36	1	1
ENSPPAP00000005042	DUF1604	PF07713.13	5.7e-34	1	1
ENSPPAP00000005039	G-patch	PF01585.23	8.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000023037	GPATCH1-201	2796	XM_024926739	ENSPPAP00000005039	931 (aa)	XP_024782507	A0A2R8ZK56
ENSPPAT00000023059	GPATCH1-202	390	-	ENSPPAP00000005042	129 (aa)	-	A0A2R8ZJB0

Gene Model

Click here to download ENSPPAG00000020990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000020990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000020990	GPATCH1	100	99.225	ENSG00000076650	GPATCH1	100	99.225	Homo_sapiens
ENSPPAG00000020990	GPATCH1	98	67.442	ENSAPOG00000009586	-	99	67.442	Acanthochromis_polyacanthus
ENSPPAG00000020990	GPATCH1	100	88.853	ENSAMEG00000015575	GPATCH1	100	88.853	Ailuropoda_melanoleuca
ENSPPAG00000020990	GPATCH1	91	70.085	ENSACIG00000001397	-	89	70.085	Amphilophus_citrinellus
ENSPPAG00000020990	GPATCH1	81	71.698	ENSAOCG00000006668	gpatch1	77	69.613	Amphiprion_ocellaris
ENSPPAG00000020990	GPATCH1	60	74.026	ENSAOCG00000009040	-	80	74.026	Amphiprion_ocellaris
ENSPPAG00000020990	GPATCH1	81	72.381	ENSAPEG00000000026	gpatch1	90	51.214	Amphiprion_percula
ENSPPAG00000020990	GPATCH1	81	72.381	ENSATEG00000014494	gpatch1	90	50.679	Anabas_testudineus
ENSPPAG00000020990	GPATCH1	90	60.650	ENSAPLG00000007584	GPATCH1	96	62.240	Anas_platyrhynchos
ENSPPAG00000020990	GPATCH1	100	95.596	ENSANAG00000027002	GPATCH1	100	95.596	Aotus_nancymaae
ENSPPAG00000020990	GPATCH1	81	72.381	ENSACLG00000024740	gpatch1	79	53.571	Astatotilapia_calliptera
ENSPPAG00000020990	GPATCH1	75	74.227	ENSAMXG00000020177	gpatch1	97	51.348	Astyanax_mexicanus
ENSPPAG00000020990	GPATCH1	91	88.471	ENSBTAG00000000721	GPATCH1	100	88.424	Bos_taurus
ENSPPAG00000020990	GPATCH1	100	95.596	ENSCJAG00000000684	GPATCH1	100	95.596	Callithrix_jacchus
ENSPPAG00000020990	GPATCH1	100	89.186	ENSCAFG00000007457	GPATCH1	84	89.186	Canis_familiaris
ENSPPAG00000020990	GPATCH1	94	88.914	ENSCAFG00020019731	GPATCH1	91	88.850	Canis_lupus_dingo
ENSPPAG00000020990	GPATCH1	99	88.516	ENSCHIG00000019626	GPATCH1	100	88.519	Capra_hircus
ENSPPAG00000020990	GPATCH1	97	78.901	ENSCAPG00000008827	GPATCH1	100	79.341	Cavia_aperea
ENSPPAG00000020990	GPATCH1	100	81.517	ENSCPOG00000024477	GPATCH1	100	82.158	Cavia_porcellus
ENSPPAG00000020990	GPATCH1	100	95.704	ENSCCAG00000024676	GPATCH1	100	95.704	Cebus_capucinus
ENSPPAG00000020990	GPATCH1	100	98.450	ENSCATG00000043637	GPATCH1	100	98.450	Cercocebus_atys
ENSPPAG00000020990	GPATCH1	96	81.991	ENSCLAG00000003395	-	92	83.090	Chinchilla_lanigera
ENSPPAG00000020990	GPATCH1	100	94.957	ENSCSAG00000004743	GPATCH1	100	94.957	Chlorocebus_sabaeus
ENSPPAG00000020990	GPATCH1	92	76.647	ENSCHOG00000012865	GPATCH1	89	80.052	Choloepus_hoffmanni
ENSPPAG00000020990	GPATCH1	83	68.305	ENSCPBG00000000666	GPATCH1	97	67.141	Chrysemys_picta_bellii
ENSPPAG00000020990	GPATCH1	74	55.789	ENSCING00000012518	-	95	32.910	Ciona_intestinalis
ENSPPAG00000020990	GPATCH1	90	96.790	ENSCANG00000012540	GPATCH1	100	96.790	Colobus_angolensis_palliatus
ENSPPAG00000020990	GPATCH1	97	80.681	ENSCGRG00001016736	Gpatch1	100	81.449	Cricetulus_griseus_chok1gshd
ENSPPAG00000020990	GPATCH1	93	68.546	ENSCGRG00000005069	Gpatch1	90	67.651	Cricetulus_griseus_crigri
ENSPPAG00000020990	GPATCH1	91	63.559	ENSCSEG00000019456	-	91	63.559	Cynoglossus_semilaevis
ENSPPAG00000020990	GPATCH1	75	75.258	ENSDARG00000033418	gpatch1	92	50.945	Danio_rerio
ENSPPAG00000020990	GPATCH1	91	86.854	ENSDNOG00000005291	GPATCH1	95	86.854	Dasypus_novemcinctus
ENSPPAG00000020990	GPATCH1	94	80.664	ENSDORG00000012546	Gpatch1	95	80.516	Dipodomys_ordii
ENSPPAG00000020990	GPATCH1	99	76.490	ENSETEG00000003626	GPATCH1	92	76.995	Echinops_telfairi
ENSPPAG00000020990	GPATCH1	74	61.053	ENSEBUG00000011286	gpatch1	91	38.259	Eptatretus_burgeri
ENSPPAG00000020990	GPATCH1	91	87.825	ENSEASG00005021162	GPATCH1	93	88.476	Equus_asinus_asinus
ENSPPAG00000020990	GPATCH1	94	88.215	ENSECAG00000022743	GPATCH1	88	88.249	Equus_caballus
ENSPPAG00000020990	GPATCH1	78	93.069	ENSEEUG00000012925	GPATCH1	78	78.922	Erinaceus_europaeus
ENSPPAG00000020990	GPATCH1	81	68.571	ENSELUG00000018195	gpatch1	90	50.677	Esox_lucius
ENSPPAG00000020990	GPATCH1	100	87.889	ENSFCAG00000014917	GPATCH1	100	87.674	Felis_catus
ENSPPAG00000020990	GPATCH1	99	62.029	ENSFALG00000007821	GPATCH1	89	63.562	Ficedula_albicollis
ENSPPAG00000020990	GPATCH1	96	82.870	ENSFDAG00000003871	GPATCH1	100	82.202	Fukomys_damarensis
ENSPPAG00000020990	GPATCH1	91	66.102	ENSFHEG00000007459	-	98	66.102	Fundulus_heteroclitus
ENSPPAG00000020990	GPATCH1	89	50.812	ENSGMOG00000003830	gpatch1	95	50.812	Gadus_morhua
ENSPPAG00000020990	GPATCH1	78	77.451	ENSGALG00000004839	GPATCH1	93	63.121	Gallus_gallus
ENSPPAG00000020990	GPATCH1	74	76.842	ENSGAFG00000006163	-	84	76.842	Gambusia_affinis
ENSPPAG00000020990	GPATCH1	75	73.196	ENSGACG00000017544	gpatch1	94	48.492	Gasterosteus_aculeatus
ENSPPAG00000020990	GPATCH1	100	65.576	ENSGAGG00000010067	GPATCH1	100	65.259	Gopherus_agassizii
ENSPPAG00000020990	GPATCH1	98	97.923	ENSGGOG00000010862	GPATCH1	100	98.675	Gorilla_gorilla
ENSPPAG00000020990	GPATCH1	81	73.333	ENSHBUG00000023462	gpatch1	90	50.564	Haplochromis_burtoni
ENSPPAG00000020990	GPATCH1	100	84.171	ENSHGLG00000009334	GPATCH1	100	84.492	Heterocephalus_glaber_female
ENSPPAG00000020990	GPATCH1	100	84.278	ENSHGLG00100018074	GPATCH1	100	84.599	Heterocephalus_glaber_male
ENSPPAG00000020990	GPATCH1	78	66.346	ENSHCOG00000006876	-	82	66.346	Hippocampus_comes
ENSPPAG00000020990	GPATCH1	81	68.571	ENSIPUG00000014977	gpatch1	90	53.054	Ictalurus_punctatus
ENSPPAG00000020990	GPATCH1	100	87.580	ENSSTOG00000003720	GPATCH1	100	87.580	Ictidomys_tridecemlineatus
ENSPPAG00000020990	GPATCH1	91	83.529	ENSJJAG00000023765	Gpatch1	100	83.136	Jaculus_jaculus
ENSPPAG00000020990	GPATCH1	81	70.476	ENSKMAG00000017950	gpatch1	89	51.494	Kryptolebias_marmoratus
ENSPPAG00000020990	GPATCH1	81	69.524	ENSLBEG00000026527	gpatch1	88	50.336	Labrus_bergylta
ENSPPAG00000020990	GPATCH1	53	73.529	ENSLBEG00000028648	-	78	67.105	Labrus_bergylta
ENSPPAG00000020990	GPATCH1	88	58.944	ENSLACG00000008130	GPATCH1	90	58.831	Latimeria_chalumnae
ENSPPAG00000020990	GPATCH1	83	73.148	ENSLOCG00000001800	gpatch1	90	55.378	Lepisosteus_oculatus
ENSPPAG00000020990	GPATCH1	99	87.717	ENSLAFG00000013589	GPATCH1	100	87.031	Loxodonta_africana
ENSPPAG00000020990	GPATCH1	100	98.450	ENSMFAG00000034418	GPATCH1	100	98.450	Macaca_fascicularis
ENSPPAG00000020990	GPATCH1	100	97.674	ENSMMUG00000011790	GPATCH1	100	97.674	Macaca_mulatta
ENSPPAG00000020990	GPATCH1	100	97.100	ENSMNEG00000045084	GPATCH1	100	97.100	Macaca_nemestrina
ENSPPAG00000020990	GPATCH1	100	86.681	ENSMLEG00000043840	GPATCH1	100	86.681	Mandrillus_leucophaeus
ENSPPAG00000020990	GPATCH1	81	72.381	ENSMZEG00005001926	gpatch1	80	53.571	Maylandia_zebra
ENSPPAG00000020990	GPATCH1	91	63.072	ENSMGAG00000005775	GPATCH1	90	62.618	Meleagris_gallopavo
ENSPPAG00000020990	GPATCH1	90	79.976	ENSMICG00000004829	GPATCH1	93	80.683	Microcebus_murinus
ENSPPAG00000020990	GPATCH1	99	81.418	ENSMOCG00000000174	Gpatch1	92	82.497	Microtus_ochrogaster
ENSPPAG00000020990	GPATCH1	81	68.571	ENSMMOG00000002140	gpatch1	87	50.886	Mola_mola
ENSPPAG00000020990	GPATCH1	100	70.476	ENSMODG00000012226	GPATCH1	100	70.476	Monodelphis_domestica
ENSPPAG00000020990	GPATCH1	81	69.524	ENSMALG00000014386	gpatch1	90	50.229	Monopterus_albus
ENSPPAG00000020990	GPATCH1	100	83.923	ENSMUSG00000063808	Gpatch1	100	93.939	Mus_musculus
ENSPPAG00000020990	GPATCH1	100	83.316	MGP_PahariEiJ_G0012816	Gpatch1	100	94.949	Mus_pahari
ENSPPAG00000020990	GPATCH1	100	83.619	MGP_SPRETEiJ_G0030681	Gpatch1	100	94.949	Mus_spretus
ENSPPAG00000020990	GPATCH1	100	87.889	ENSMPUG00000007658	GPATCH1	100	87.889	Mustela_putorius_furo
ENSPPAG00000020990	GPATCH1	100	87.768	ENSMLUG00000012161	GPATCH1	100	87.768	Myotis_lucifugus
ENSPPAG00000020990	GPATCH1	100	84.013	ENSNGAG00000012455	Gpatch1	100	84.013	Nannospalax_galili
ENSPPAG00000020990	GPATCH1	99	66.406	ENSNBRG00000003140	-	96	66.406	Neolamprologus_brichardi
ENSPPAG00000020990	GPATCH1	100	99.225	ENSNLEG00000007659	GPATCH1	100	99.225	Nomascus_leucogenys
ENSPPAG00000020990	GPATCH1	78	68.169	ENSMEUG00000015174	GPATCH1	78	68.169	Notamacropus_eugenii
ENSPPAG00000020990	GPATCH1	99	82.139	ENSODEG00000007103	GPATCH1	99	82.548	Octodon_degus
ENSPPAG00000020990	GPATCH1	83	71.963	ENSONIG00000003302	gpatch1	92	51.852	Oreochromis_niloticus
ENSPPAG00000020990	GPATCH1	99	70.374	ENSOANG00000012732	GPATCH1	99	69.742	Ornithorhynchus_anatinus
ENSPPAG00000020990	GPATCH1	100	87.138	ENSOCUG00000015905	GPATCH1	100	87.138	Oryctolagus_cuniculus
ENSPPAG00000020990	GPATCH1	75	74.227	ENSORLG00000018706	gpatch1	88	50.411	Oryzias_latipes
ENSPPAG00000020990	GPATCH1	81	69.524	ENSORLG00020014884	-	93	57.447	Oryzias_latipes_hni
ENSPPAG00000020990	GPATCH1	81	69.524	ENSORLG00015012287	-	97	58.511	Oryzias_latipes_hsok
ENSPPAG00000020990	GPATCH1	81	69.524	ENSOMEG00000022688	gpatch1	90	50.463	Oryzias_melastigma
ENSPPAG00000020990	GPATCH1	85	89.015	ENSOGAG00000004016	GPATCH1	100	89.015	Otolemur_garnettii
ENSPPAG00000020990	GPATCH1	90	88.019	ENSOARG00000004365	GPATCH1	99	87.784	Ovis_aries
ENSPPAG00000020990	GPATCH1	100	88.424	ENSPPRG00000017245	GPATCH1	100	88.210	Panthera_pardus
ENSPPAG00000020990	GPATCH1	100	88.960	ENSPTIG00000019649	GPATCH1	100	88.746	Panthera_tigris_altaica
ENSPPAG00000020990	GPATCH1	100	99.463	ENSPTRG00000010803	GPATCH1	100	99.463	Pan_troglodytes
ENSPPAG00000020990	GPATCH1	100	98.450	ENSPANG00000012374	GPATCH1	100	98.450	Papio_anubis
ENSPPAG00000020990	GPATCH1	80	68.932	ENSPKIG00000020745	gpatch1	90	53.855	Paramormyrops_kingsleyae
ENSPPAG00000020990	GPATCH1	100	61.870	ENSPSIG00000013433	GPATCH1	100	62.288	Pelodiscus_sinensis
ENSPPAG00000020990	GPATCH1	87	67.257	ENSPMGG00000014320	-	84	67.257	Periophthalmus_magnuspinnatus
ENSPPAG00000020990	GPATCH1	100	82.781	ENSPEMG00000000636	Gpatch1	100	82.139	Peromyscus_maniculatus_bairdii
ENSPPAG00000020990	GPATCH1	83	85.981	ENSPCIG00000021003	GPATCH1	96	75.029	Phascolarctos_cinereus
ENSPPAG00000020990	GPATCH1	75	78.351	ENSPLAG00000017953	-	100	78.571	Poecilia_latipinna
ENSPPAG00000020990	GPATCH1	73	78.723	ENSPMEG00000017559	-	100	77.551	Poecilia_mexicana
ENSPPAG00000020990	GPATCH1	85	71.818	ENSPREG00000008264	gpatch1	97	45.848	Poecilia_reticulata
ENSPPAG00000020990	GPATCH1	100	94.844	ENSPPYG00000009824	GPATCH1	100	94.844	Pongo_abelii
ENSPPAG00000020990	GPATCH1	83	78.960	ENSPCAG00000005931	GPATCH1	93	80.318	Procavia_capensis
ENSPPAG00000020990	GPATCH1	93	82.184	ENSPCOG00000009674	GPATCH1	97	83.373	Propithecus_coquereli
ENSPPAG00000020990	GPATCH1	83	89.720	ENSPVAG00000017767	GPATCH1	91	86.951	Pteropus_vampyrus
ENSPPAG00000020990	GPATCH1	83	71.963	ENSPNYG00000018189	gpatch1	91	53.625	Pundamilia_nyererei
ENSPPAG00000020990	GPATCH1	81	69.524	ENSPNAG00000013187	gpatch1	90	52.285	Pygocentrus_nattereri
ENSPPAG00000020990	GPATCH1	100	80.342	ENSRNOG00000011584	Gpatch1	100	83.280	Rattus_norvegicus
ENSPPAG00000020990	GPATCH1	100	88.841	ENSRBIG00000034723	GPATCH1	100	87.983	Rhinopithecus_bieti
ENSPPAG00000020990	GPATCH1	100	97.674	ENSRROG00000024428	GPATCH1	100	97.674	Rhinopithecus_roxellana
ENSPPAG00000020990	GPATCH1	100	94.415	ENSSBOG00000034650	GPATCH1	100	94.629	Saimiri_boliviensis_boliviensis
ENSPPAG00000020990	GPATCH1	99	73.419	ENSSHAG00000016016	GPATCH1	99	72.669	Sarcophilus_harrisii
ENSPPAG00000020990	GPATCH1	81	66.667	ENSSFOG00015011535	gpatch1	89	52.841	Scleropages_formosus
ENSPPAG00000020990	GPATCH1	81	68.571	ENSSMAG00000002883	gpatch1	93	47.231	Scophthalmus_maximus
ENSPPAG00000020990	GPATCH1	98	60.584	ENSSDUG00000007444	gpatch1	90	48.391	Seriola_dumerili
ENSPPAG00000020990	GPATCH1	81	72.642	ENSSLDG00000002856	gpatch1	89	52.387	Seriola_lalandi_dorsalis
ENSPPAG00000020990	GPATCH1	83	88.785	ENSSARG00000004108	GPATCH1	72	85.207	Sorex_araneus
ENSPPAG00000020990	GPATCH1	83	72.477	ENSSPUG00000013348	-	98	73.152	Sphenodon_punctatus
ENSPPAG00000020990	GPATCH1	91	72.269	ENSSPAG00000022432	-	98	72.269	Stegastes_partitus
ENSPPAG00000020990	GPATCH1	91	87.529	ENSSSCG00000002865	GPATCH1	94	87.529	Sus_scrofa
ENSPPAG00000020990	GPATCH1	99	63.862	ENSTGUG00000009401	GPATCH1	91	63.507	Taeniopygia_guttata
ENSPPAG00000020990	GPATCH1	75	75.258	ENSTRUG00000005785	-	90	48.786	Takifugu_rubripes
ENSPPAG00000020990	GPATCH1	75	75.258	ENSTRUG00000025081	gpatch1	90	48.786	Takifugu_rubripes
ENSPPAG00000020990	GPATCH1	81	70.755	ENSTNIG00000002554	gpatch1	99	52.599	Tetraodon_nigroviridis
ENSPPAG00000020990	GPATCH1	57	100.000	ENSTBEG00000007750	-	84	77.295	Tupaia_belangeri
ENSPPAG00000020990	GPATCH1	91	80.070	ENSTTRG00000012221	GPATCH1	100	80.769	Tursiops_truncatus
ENSPPAG00000020990	GPATCH1	97	87.200	ENSUAMG00000015638	-	92	87.200	Ursus_americanus
ENSPPAG00000020990	GPATCH1	100	83.721	ENSUMAG00000014645	GPATCH1	100	87.962	Ursus_maritimus
ENSPPAG00000020990	GPATCH1	80	94.857	ENSVPAG00000010313	GPATCH1	86	95.109	Vicugna_pacos
ENSPPAG00000020990	GPATCH1	94	88.914	ENSVVUG00000016572	GPATCH1	91	88.850	Vulpes_vulpes
ENSPPAG00000020990	GPATCH1	99	50.794	ENSXETG00000018276	gpatch1	100	51.320	Xenopus_tropicalis
ENSPPAG00000020990	GPATCH1	96	65.079	ENSXCOG00000009851	-	88	65.079	Xiphophorus_couchianus
ENSPPAG00000020990	GPATCH1	74	77.895	ENSXMAG00000018182	-	70	77.895	Xiphophorus_maculatus