EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000022013 (Gene tree)
Gene ID: 100993745
Gene Symbol: CNOT1
Alias: -
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 108190 bases
Position: chr16:57919283-58027472
Accession: 100993745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000005504	Not1	PF04054.15	1.5e-152	1	1
ENSPPAP00000005518	Not1	PF04054.15	1.5e-152	1	1
ENSPPAP00000005526	Not1	PF04054.15	2.1e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000025018	CNOT1-201	8457	XM_003823702	ENSPPAP00000005504	2376 (aa)	XP_003823750	A0A2R8ZLN5
ENSPPAT00000025095	CNOT1-203	6981	-	ENSPPAP00000005526	2326 (aa)	-	A0A2R8ZRR8
ENSPPAT00000025105	CNOT1-204	291	-	ENSPPAP00000005532	96 (aa)	-	A0A2R8ZKN8
ENSPPAT00000025076	CNOT1-202	7152	-	ENSPPAP00000005518	2383 (aa)	-	A0A2R8ZKM3

Gene Model

Click here to download ENSPPAG00000022013's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000022013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000022013	CNOT1	100	100.000	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSPPAG00000022013	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSPPAG00000022013	CNOT1	100	99.495	ENSAMEG00000017298	CNOT1	100	99.495	Ailuropoda_melanoleuca
ENSPPAG00000022013	CNOT1	90	90.028	ENSACIG00000016003	cnot1	100	90.308	Amphilophus_citrinellus
ENSPPAG00000022013	CNOT1	100	90.554	ENSAPEG00000022342	cnot1	100	90.470	Amphiprion_percula
ENSPPAG00000022013	CNOT1	97	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSPPAG00000022013	CNOT1	100	97.647	ENSAPLG00000007162	CNOT1	100	97.647	Anas_platyrhynchos
ENSPPAG00000022013	CNOT1	92	95.965	ENSACAG00000001602	CNOT1	98	96.197	Anolis_carolinensis
ENSPPAG00000022013	CNOT1	100	98.538	ENSANAG00000038198	CNOT1	100	98.538	Aotus_nancymaae
ENSPPAG00000022013	CNOT1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSPPAG00000022013	CNOT1	100	90.913	ENSAMXG00000013170	cnot1	100	91.463	Astyanax_mexicanus
ENSPPAG00000022013	CNOT1	100	99.747	ENSBTAG00000020782	CNOT1	100	99.747	Bos_taurus
ENSPPAG00000022013	CNOT1	82	40.277	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSPPAG00000022013	CNOT1	100	99.874	ENSCJAG00000011318	CNOT1	100	99.874	Callithrix_jacchus
ENSPPAG00000022013	CNOT1	100	99.412	ENSCAFG00000008426	CNOT1	100	99.412	Canis_familiaris
ENSPPAG00000022013	CNOT1	100	99.699	ENSCAFG00020010156	CNOT1	100	99.699	Canis_lupus_dingo
ENSPPAG00000022013	CNOT1	100	99.747	ENSCHIG00000010452	CNOT1	100	99.747	Capra_hircus
ENSPPAG00000022013	CNOT1	100	99.874	ENSTSYG00000006888	CNOT1	100	99.874	Carlito_syrichta
ENSPPAG00000022013	CNOT1	100	95.034	ENSCPOG00000013026	CNOT1	100	95.034	Cavia_porcellus
ENSPPAG00000022013	CNOT1	100	98.323	ENSCCAG00000026333	CNOT1	100	98.323	Cebus_capucinus
ENSPPAG00000022013	CNOT1	100	99.958	ENSCATG00000032625	CNOT1	100	99.958	Cercocebus_atys
ENSPPAG00000022013	CNOT1	100	99.663	ENSCLAG00000006289	CNOT1	100	99.663	Chinchilla_lanigera
ENSPPAG00000022013	CNOT1	100	99.958	ENSCSAG00000004731	CNOT1	100	99.958	Chlorocebus_sabaeus
ENSPPAG00000022013	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSPPAG00000022013	CNOT1	95	99.583	ENSCPBG00000026222	CNOT1	99	99.583	Chrysemys_picta_bellii
ENSPPAG00000022013	CNOT1	100	58.995	ENSCING00000009149	-	100	58.658	Ciona_intestinalis
ENSPPAG00000022013	CNOT1	89	62.973	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSPPAG00000022013	CNOT1	100	98.074	ENSCANG00000040534	CNOT1	100	98.074	Colobus_angolensis_palliatus
ENSPPAG00000022013	CNOT1	100	99.327	ENSCGRG00001016365	Cnot1	100	99.327	Cricetulus_griseus_chok1gshd
ENSPPAG00000022013	CNOT1	100	99.327	ENSCGRG00000001714	Cnot1	100	99.327	Cricetulus_griseus_crigri
ENSPPAG00000022013	CNOT1	100	83.111	ENSCVAG00000018930	cnot1	100	82.944	Cyprinodon_variegatus
ENSPPAG00000022013	CNOT1	100	89.941	ENSDARG00000004174	cnot1	100	89.816	Danio_rerio
ENSPPAG00000022013	CNOT1	100	97.181	ENSDNOG00000013250	CNOT1	100	97.181	Dasypus_novemcinctus
ENSPPAG00000022013	CNOT1	99	46.230	FBgn0085436	Not1	99	48.431	Drosophila_melanogaster
ENSPPAG00000022013	CNOT1	84	97.590	ENSETEG00000012806	CNOT1	84	97.590	Echinops_telfairi
ENSPPAG00000022013	CNOT1	81	82.372	ENSEBUG00000011534	cnot1	95	82.372	Eptatretus_burgeri
ENSPPAG00000022013	CNOT1	100	95.971	ENSEASG00005005819	CNOT1	100	98.805	Equus_asinus_asinus
ENSPPAG00000022013	CNOT1	100	99.790	ENSECAG00000009889	CNOT1	100	99.813	Equus_caballus
ENSPPAG00000022013	CNOT1	90	99.373	ENSEEUG00000006015	CNOT1	90	99.373	Erinaceus_europaeus
ENSPPAG00000022013	CNOT1	100	89.776	ENSELUG00000014085	cnot1	100	89.458	Esox_lucius
ENSPPAG00000022013	CNOT1	100	99.496	ENSFCAG00000025155	CNOT1	100	99.496	Felis_catus
ENSPPAG00000022013	CNOT1	100	97.685	ENSFALG00000007285	CNOT1	100	97.685	Ficedula_albicollis
ENSPPAG00000022013	CNOT1	100	99.579	ENSFDAG00000013399	CNOT1	100	99.579	Fukomys_damarensis
ENSPPAG00000022013	CNOT1	100	90.382	ENSFHEG00000020574	cnot1	100	90.340	Fundulus_heteroclitus
ENSPPAG00000022013	CNOT1	92	89.657	ENSGMOG00000012864	cnot1	100	90.028	Gadus_morhua
ENSPPAG00000022013	CNOT1	100	97.727	ENSGALG00000002301	CNOT1	100	97.727	Gallus_gallus
ENSPPAG00000022013	CNOT1	100	89.169	ENSGAFG00000015005	cnot1	100	89.169	Gambusia_affinis
ENSPPAG00000022013	CNOT1	92	90.496	ENSGACG00000002606	cnot1	100	95.752	Gasterosteus_aculeatus
ENSPPAG00000022013	CNOT1	100	97.897	ENSGAGG00000022646	CNOT1	100	97.897	Gopherus_agassizii
ENSPPAG00000022013	CNOT1	100	99.958	ENSGGOG00000009547	CNOT1	100	99.958	Gorilla_gorilla
ENSPPAG00000022013	CNOT1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSPPAG00000022013	CNOT1	100	99.495	ENSHGLG00000014322	CNOT1	100	99.495	Heterocephalus_glaber_female
ENSPPAG00000022013	CNOT1	100	89.423	ENSHCOG00000006501	cnot1	100	89.562	Hippocampus_comes
ENSPPAG00000022013	CNOT1	100	88.926	ENSIPUG00000011915	cnot1	100	89.304	Ictalurus_punctatus
ENSPPAG00000022013	CNOT1	100	99.579	ENSSTOG00000005490	CNOT1	100	99.579	Ictidomys_tridecemlineatus
ENSPPAG00000022013	CNOT1	100	99.011	ENSJJAG00000000633	Cnot1	100	99.011	Jaculus_jaculus
ENSPPAG00000022013	CNOT1	100	90.255	ENSKMAG00000006149	cnot1	100	90.092	Kryptolebias_marmoratus
ENSPPAG00000022013	CNOT1	95	96.414	ENSLBEG00000004740	cnot1	100	96.414	Labrus_bergylta
ENSPPAG00000022013	CNOT1	100	95.076	ENSLACG00000010869	CNOT1	100	95.076	Latimeria_chalumnae
ENSPPAG00000022013	CNOT1	100	93.037	ENSLOCG00000006324	cnot1	100	93.037	Lepisosteus_oculatus
ENSPPAG00000022013	CNOT1	100	99.537	ENSLAFG00000000098	CNOT1	100	99.537	Loxodonta_africana
ENSPPAG00000022013	CNOT1	100	99.957	ENSMFAG00000035888	CNOT1	100	99.957	Macaca_fascicularis
ENSPPAG00000022013	CNOT1	100	99.916	ENSMMUG00000014625	CNOT1	100	99.916	Macaca_mulatta
ENSPPAG00000022013	CNOT1	100	97.377	ENSMNEG00000031820	CNOT1	100	99.953	Macaca_nemestrina
ENSPPAG00000022013	CNOT1	100	98.753	ENSMLEG00000040933	CNOT1	100	98.753	Mandrillus_leucophaeus
ENSPPAG00000022013	CNOT1	100	89.173	ENSMAMG00000016524	cnot1	100	89.211	Mastacembelus_armatus
ENSPPAG00000022013	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSPPAG00000022013	CNOT1	100	97.475	ENSMGAG00000001908	CNOT1	100	97.475	Meleagris_gallopavo
ENSPPAG00000022013	CNOT1	100	99.579	ENSMICG00000007071	CNOT1	100	99.579	Microcebus_murinus
ENSPPAG00000022013	CNOT1	100	99.369	ENSMOCG00000017969	Cnot1	100	99.369	Microtus_ochrogaster
ENSPPAG00000022013	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSPPAG00000022013	CNOT1	100	97.897	ENSMODG00000014199	CNOT1	100	97.897	Monodelphis_domestica
ENSPPAG00000022013	CNOT1	100	90.256	ENSMALG00000008645	cnot1	100	90.256	Monopterus_albus
ENSPPAG00000022013	CNOT1	95	99.889	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	Mus_caroli
ENSPPAG00000022013	CNOT1	100	99.411	ENSMUSG00000036550	Cnot1	100	99.411	Mus_musculus
ENSPPAG00000022013	CNOT1	100	99.369	MGP_PahariEiJ_G0023028	Cnot1	100	99.369	Mus_pahari
ENSPPAG00000022013	CNOT1	100	99.411	MGP_SPRETEiJ_G0032549	Cnot1	100	99.411	Mus_spretus
ENSPPAG00000022013	CNOT1	100	99.790	ENSMPUG00000004830	CNOT1	100	99.790	Mustela_putorius_furo
ENSPPAG00000022013	CNOT1	100	99.116	ENSMLUG00000003728	CNOT1	100	99.116	Myotis_lucifugus
ENSPPAG00000022013	CNOT1	100	99.621	ENSNGAG00000018628	Cnot1	100	99.621	Nannospalax_galili
ENSPPAG00000022013	CNOT1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSPPAG00000022013	CNOT1	100	99.957	ENSNLEG00000003566	CNOT1	100	99.957	Nomascus_leucogenys
ENSPPAG00000022013	CNOT1	86	98.434	ENSMEUG00000006145	CNOT1	87	98.434	Notamacropus_eugenii
ENSPPAG00000022013	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSPPAG00000022013	CNOT1	100	99.537	ENSODEG00000016337	CNOT1	100	99.537	Octodon_degus
ENSPPAG00000022013	CNOT1	100	90.620	ENSONIG00000007358	cnot1	100	90.213	Oreochromis_niloticus
ENSPPAG00000022013	CNOT1	92	98.276	ENSOANG00000012109	CNOT1	100	98.354	Ornithorhynchus_anatinus
ENSPPAG00000022013	CNOT1	100	99.705	ENSOCUG00000006911	CNOT1	100	99.705	Oryctolagus_cuniculus
ENSPPAG00000022013	CNOT1	100	90.356	ENSORLG00000013734	cnot1	100	90.394	Oryzias_latipes
ENSPPAG00000022013	CNOT1	100	90.819	ENSORLG00020017012	cnot1	100	90.488	Oryzias_latipes_hni
ENSPPAG00000022013	CNOT1	100	90.734	ENSORLG00015007091	cnot1	100	90.231	Oryzias_latipes_hsok
ENSPPAG00000022013	CNOT1	100	90.056	ENSOMEG00000015124	cnot1	100	90.352	Oryzias_melastigma
ENSPPAG00000022013	CNOT1	100	99.621	ENSOGAG00000000543	CNOT1	100	99.621	Otolemur_garnettii
ENSPPAG00000022013	CNOT1	100	99.747	ENSOARG00000001567	CNOT1	100	99.747	Ovis_aries
ENSPPAG00000022013	CNOT1	100	99.790	ENSPPRG00000004867	CNOT1	100	99.790	Panthera_pardus
ENSPPAG00000022013	CNOT1	100	99.790	ENSPTIG00000012589	CNOT1	100	99.790	Panthera_tigris_altaica
ENSPPAG00000022013	CNOT1	100	100.000	ENSPTRG00000008183	CNOT1	100	100.000	Pan_troglodytes
ENSPPAG00000022013	CNOT1	100	96.396	ENSPANG00000020901	CNOT1	100	96.396	Papio_anubis
ENSPPAG00000022013	CNOT1	97	93.258	ENSPKIG00000002914	CNOT1	99	93.258	Paramormyrops_kingsleyae
ENSPPAG00000022013	CNOT1	100	92.111	ENSPKIG00000023538	CNOT1	100	92.279	Paramormyrops_kingsleyae
ENSPPAG00000022013	CNOT1	100	97.769	ENSPSIG00000005499	CNOT1	100	97.769	Pelodiscus_sinensis
ENSPPAG00000022013	CNOT1	100	81.166	ENSPMAG00000009381	cnot1	100	81.066	Petromyzon_marinus
ENSPPAG00000022013	CNOT1	100	97.809	ENSPCIG00000007343	CNOT1	100	99.583	Phascolarctos_cinereus
ENSPPAG00000022013	CNOT1	99	89.901	ENSPFOG00000003497	cnot1	100	89.852	Poecilia_formosa
ENSPPAG00000022013	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.970	Poecilia_latipinna
ENSPPAG00000022013	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.970	Poecilia_mexicana
ENSPPAG00000022013	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.970	Poecilia_reticulata
ENSPPAG00000022013	CNOT1	100	99.958	ENSPPYG00000007410	CNOT1	100	99.958	Pongo_abelii
ENSPPAG00000022013	CNOT1	90	97.530	ENSPCAG00000003241	CNOT1	90	97.530	Procavia_capensis
ENSPPAG00000022013	CNOT1	100	99.613	ENSPCOG00000027139	CNOT1	100	99.613	Propithecus_coquereli
ENSPPAG00000022013	CNOT1	100	97.180	ENSPVAG00000004243	CNOT1	100	97.180	Pteropus_vampyrus
ENSPPAG00000022013	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSPPAG00000022013	CNOT1	100	89.903	ENSPNAG00000000246	cnot1	100	90.324	Pygocentrus_nattereri
ENSPPAG00000022013	CNOT1	100	99.327	ENSRNOG00000012271	Cnot1	100	99.327	Rattus_norvegicus
ENSPPAG00000022013	CNOT1	100	97.850	ENSRBIG00000044598	CNOT1	100	97.850	Rhinopithecus_bieti
ENSPPAG00000022013	CNOT1	100	99.958	ENSRROG00000000906	CNOT1	100	99.958	Rhinopithecus_roxellana
ENSPPAG00000022013	CNOT1	57	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSPPAG00000022013	CNOT1	100	95.669	ENSSBOG00000029155	CNOT1	100	95.669	Saimiri_boliviensis_boliviensis
ENSPPAG00000022013	CNOT1	100	98.150	ENSSHAG00000012187	CNOT1	100	98.150	Sarcophilus_harrisii
ENSPPAG00000022013	CNOT1	100	92.591	ENSSFOG00015017614	cnot1	100	92.331	Scleropages_formosus
ENSPPAG00000022013	CNOT1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSPPAG00000022013	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSPPAG00000022013	CNOT1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSPPAG00000022013	CNOT1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSPPAG00000022013	CNOT1	100	90.642	ENSSPAG00000018802	cnot1	100	90.390	Stegastes_partitus
ENSPPAG00000022013	CNOT1	100	99.621	ENSSSCG00000002799	CNOT1	100	99.621	Sus_scrofa
ENSPPAG00000022013	CNOT1	100	97.562	ENSTGUG00000005919	CNOT1	100	97.562	Taeniopygia_guttata
ENSPPAG00000022013	CNOT1	100	89.070	ENSTNIG00000018706	cnot1	100	88.917	Tetraodon_nigroviridis
ENSPPAG00000022013	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSPPAG00000022013	CNOT1	95	99.534	ENSTTRG00000008460	CNOT1	95	99.534	Tursiops_truncatus
ENSPPAG00000022013	CNOT1	100	99.790	ENSUAMG00000009251	CNOT1	100	99.790	Ursus_americanus
ENSPPAG00000022013	CNOT1	100	99.790	ENSUMAG00000021291	CNOT1	100	99.790	Ursus_maritimus
ENSPPAG00000022013	CNOT1	97	97.244	ENSVPAG00000008846	CNOT1	97	97.244	Vicugna_pacos
ENSPPAG00000022013	CNOT1	100	98.658	ENSVVUG00000024037	CNOT1	100	99.316	Vulpes_vulpes
ENSPPAG00000022013	CNOT1	100	90.260	ENSXETG00000015900	cnot1	100	90.050	Xenopus_tropicalis
ENSPPAG00000022013	CNOT1	100	89.337	ENSXCOG00000013552	cnot1	100	89.337	Xiphophorus_couchianus
ENSPPAG00000022013	CNOT1	100	89.379	ENSXMAG00000006031	cnot1	100	89.379	Xiphophorus_maculatus