EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000023703 (Gene tree)
Gene ID: 100978407
Gene Symbol: RPP40
Alias: -
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 8588 bases
Position: chr6:5015953-5024540
Accession: 100978407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000005844	Ribonuc_P_40	PF08584.11	7.4e-95	1	1
ENSPPAP00000005855	Ribonuc_P_40	PF08584.11	3.4e-78	1	1
ENSPPAP00000005856	Ribonuc_P_40	PF08584.11	7.9e-75	1	2
ENSPPAP00000005856	Ribonuc_P_40	PF08584.11	7.9e-75	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000026131	RPP40-203	966	-	ENSPPAP00000005856	321 (aa)	-	A0A2R8ZPD0
ENSPPAT00000026129	RPP40-202	1023	-	ENSPPAP00000005855	340 (aa)	-	A0A2R8ZMS4
ENSPPAT00000026105	RPP40-201	1179	XM_003806714	ENSPPAP00000005844	363 (aa)	XP_003806762	A0A2R8ZLL8

Gene Model

Click here to download ENSPPAG00000023703's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03008	Ribosome biogenesis in eukaryotes	KEGG
pps03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000023703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000023703	RPP40	100	98.754	ENSG00000124787	RPP40	100	98.754	Homo_sapiens
ENSPPAG00000023703	RPP40	88	32.441	ENSAPOG00000008660	rpp40	92	32.441	Acanthochromis_polyacanthus
ENSPPAG00000023703	RPP40	100	86.226	ENSAMEG00000012938	RPP40	100	86.226	Ailuropoda_melanoleuca
ENSPPAG00000023703	RPP40	98	36.464	ENSACIG00000003617	rpp40	98	36.464	Amphilophus_citrinellus
ENSPPAG00000023703	RPP40	98	37.815	ENSAOCG00000011846	rpp40	99	37.815	Amphiprion_ocellaris
ENSPPAG00000023703	RPP40	98	37.815	ENSAPEG00000001322	rpp40	99	37.815	Amphiprion_percula
ENSPPAG00000023703	RPP40	98	38.440	ENSATEG00000006584	rpp40	99	38.440	Anabas_testudineus
ENSPPAG00000023703	RPP40	83	67.000	ENSAPLG00000005691	RPP40	99	67.000	Anas_platyrhynchos
ENSPPAG00000023703	RPP40	99	62.953	ENSACAG00000006550	RPP40	88	62.953	Anolis_carolinensis
ENSPPAG00000023703	RPP40	100	95.317	ENSANAG00000029246	RPP40	100	95.317	Aotus_nancymaae
ENSPPAG00000023703	RPP40	97	38.746	ENSACLG00000015883	rpp40	95	38.746	Astatotilapia_calliptera
ENSPPAG00000023703	RPP40	98	48.739	ENSAMXG00000001755	rpp40	99	48.739	Astyanax_mexicanus
ENSPPAG00000023703	RPP40	100	82.369	ENSBTAG00000003332	RPP40	100	82.369	Bos_taurus
ENSPPAG00000023703	RPP40	100	95.639	ENSCJAG00000021373	RPP40	100	95.639	Callithrix_jacchus
ENSPPAG00000023703	RPP40	100	85.675	ENSCAFG00000009435	RPP40	100	85.675	Canis_familiaris
ENSPPAG00000023703	RPP40	100	85.675	ENSCAFG00020013380	RPP40	100	85.675	Canis_lupus_dingo
ENSPPAG00000023703	RPP40	100	82.094	ENSCHIG00000016849	RPP40	100	82.094	Capra_hircus
ENSPPAG00000023703	RPP40	100	88.474	ENSTSYG00000032857	RPP40	100	89.439	Carlito_syrichta
ENSPPAG00000023703	RPP40	90	78.287	ENSCAPG00000004957	RPP40	98	78.287	Cavia_aperea
ENSPPAG00000023703	RPP40	100	84.573	ENSCPOG00000005855	RPP40	100	84.573	Cavia_porcellus
ENSPPAG00000023703	RPP40	100	95.882	ENSCCAG00000019809	RPP40	100	95.882	Cebus_capucinus
ENSPPAG00000023703	RPP40	100	95.950	ENSCATG00000038787	RPP40	100	95.950	Cercocebus_atys
ENSPPAG00000023703	RPP40	100	83.747	ENSCLAG00000003235	RPP40	100	83.747	Chinchilla_lanigera
ENSPPAG00000023703	RPP40	100	96.143	ENSCSAG00000007307	RPP40	100	96.143	Chlorocebus_sabaeus
ENSPPAG00000023703	RPP40	74	68.800	ENSCHOG00000005856	-	100	68.800	Choloepus_hoffmanni
ENSPPAG00000023703	RPP40	99	69.444	ENSCPBG00000009003	RPP40	99	69.444	Chrysemys_picta_bellii
ENSPPAG00000023703	RPP40	100	96.885	ENSCANG00000033965	RPP40	100	96.885	Colobus_angolensis_palliatus
ENSPPAG00000023703	RPP40	100	78.788	ENSCGRG00001018328	Rpp40	100	78.788	Cricetulus_griseus_chok1gshd
ENSPPAG00000023703	RPP40	100	78.788	ENSCGRG00000011344	Rpp40	100	78.788	Cricetulus_griseus_crigri
ENSPPAG00000023703	RPP40	98	36.798	ENSCSEG00000015006	-	98	36.798	Cynoglossus_semilaevis
ENSPPAG00000023703	RPP40	74	33.453	ENSCVAG00000012169	rpp40	100	33.453	Cyprinodon_variegatus
ENSPPAG00000023703	RPP40	98	50.279	ENSDARG00000017605	rpp40	99	50.279	Danio_rerio
ENSPPAG00000023703	RPP40	82	82.155	ENSDNOG00000048136	RPP40	99	82.155	Dasypus_novemcinctus
ENSPPAG00000023703	RPP40	100	63.277	ENSDORG00000011196	-	100	63.277	Dipodomys_ordii
ENSPPAG00000023703	RPP40	100	82.645	ENSDORG00000029944	-	100	82.645	Dipodomys_ordii
ENSPPAG00000023703	RPP40	90	80.275	ENSETEG00000007458	RPP40	100	65.840	Echinops_telfairi
ENSPPAG00000023703	RPP40	98	43.662	ENSEBUG00000000386	rpp40	99	43.662	Eptatretus_burgeri
ENSPPAG00000023703	RPP40	100	87.603	ENSEASG00005012116	RPP40	80	87.603	Equus_asinus_asinus
ENSPPAG00000023703	RPP40	100	87.879	ENSECAG00000017247	RPP40	80	87.879	Equus_caballus
ENSPPAG00000023703	RPP40	82	65.657	ENSEEUG00000012087	RPP40	100	65.657	Erinaceus_europaeus
ENSPPAG00000023703	RPP40	98	48.324	ENSELUG00000017004	rpp40	99	48.324	Esox_lucius
ENSPPAG00000023703	RPP40	100	86.777	ENSFCAG00000009249	RPP40	100	86.777	Felis_catus
ENSPPAG00000023703	RPP40	86	65.138	ENSFALG00000013166	RPP40	100	65.138	Ficedula_albicollis
ENSPPAG00000023703	RPP40	100	85.950	ENSFDAG00000013001	-	100	85.950	Fukomys_damarensis
ENSPPAG00000023703	RPP40	80	70.103	ENSFDAG00000000265	-	99	70.103	Fukomys_damarensis
ENSPPAG00000023703	RPP40	98	39.496	ENSFHEG00000021429	rpp40	88	39.496	Fundulus_heteroclitus
ENSPPAG00000023703	RPP40	87	44.286	ENSGMOG00000018653	rpp40	100	44.286	Gadus_morhua
ENSPPAG00000023703	RPP40	99	65.556	ENSGALG00000036074	RPP40	99	65.556	Gallus_gallus
ENSPPAG00000023703	RPP40	82	34.228	ENSGAFG00000004189	-	98	34.228	Gambusia_affinis
ENSPPAG00000023703	RPP40	98	38.095	ENSGACG00000002472	rpp40	99	38.095	Gasterosteus_aculeatus
ENSPPAG00000023703	RPP40	99	69.722	ENSGAGG00000012918	RPP40	99	69.722	Gopherus_agassizii
ENSPPAG00000023703	RPP40	100	98.529	ENSGGOG00000013764	RPP40	100	98.529	Gorilla_gorilla
ENSPPAG00000023703	RPP40	90	37.920	ENSHBUG00000009378	rpp40	93	37.920	Haplochromis_burtoni
ENSPPAG00000023703	RPP40	100	85.399	ENSHGLG00000004871	RPP40	100	85.399	Heterocephalus_glaber_female
ENSPPAG00000023703	RPP40	100	85.399	ENSHGLG00100002080	RPP40	100	85.399	Heterocephalus_glaber_male
ENSPPAG00000023703	RPP40	97	30.878	ENSHCOG00000013264	-	94	30.878	Hippocampus_comes
ENSPPAG00000023703	RPP40	99	48.333	ENSIPUG00000008951	RPP40	99	48.333	Ictalurus_punctatus
ENSPPAG00000023703	RPP40	100	85.124	ENSSTOG00000011199	RPP40	100	85.124	Ictidomys_tridecemlineatus
ENSPPAG00000023703	RPP40	100	78.824	ENSJJAG00000020629	Rpp40	100	78.824	Jaculus_jaculus
ENSPPAG00000023703	RPP40	98	37.255	ENSKMAG00000019358	rpp40	99	37.255	Kryptolebias_marmoratus
ENSPPAG00000023703	RPP40	98	39.776	ENSLBEG00000022724	rpp40	99	39.776	Labrus_bergylta
ENSPPAG00000023703	RPP40	99	59.167	ENSLACG00000014848	RPP40	99	59.167	Latimeria_chalumnae
ENSPPAG00000023703	RPP40	100	53.994	ENSLOCG00000011650	rpp40	100	53.994	Lepisosteus_oculatus
ENSPPAG00000023703	RPP40	83	84.818	ENSLAFG00000007530	RPP40	100	84.818	Loxodonta_africana
ENSPPAG00000023703	RPP40	100	96.176	ENSMFAG00000043100	RPP40	100	96.176	Macaca_fascicularis
ENSPPAG00000023703	RPP40	100	96.471	ENSMMUG00000004966	RPP40	100	96.471	Macaca_mulatta
ENSPPAG00000023703	RPP40	100	96.765	ENSMNEG00000041986	RPP40	100	96.765	Macaca_nemestrina
ENSPPAG00000023703	RPP40	98	86.866	ENSMLEG00000040851	RPP40	100	94.318	Mandrillus_leucophaeus
ENSPPAG00000023703	RPP40	98	38.936	ENSMAMG00000019551	rpp40	98	38.936	Mastacembelus_armatus
ENSPPAG00000023703	RPP40	98	39.216	ENSMZEG00005019475	rpp40	99	39.216	Maylandia_zebra
ENSPPAG00000023703	RPP40	99	62.222	ENSMGAG00000004009	RPP40	99	62.222	Meleagris_gallopavo
ENSPPAG00000023703	RPP40	100	83.235	ENSMAUG00000010268	Rpp40	100	83.235	Mesocricetus_auratus
ENSPPAG00000023703	RPP40	100	87.539	ENSMICG00000003297	RPP40	100	87.539	Microcebus_murinus
ENSPPAG00000023703	RPP40	100	82.941	ENSMOCG00000000305	Rpp40	100	82.941	Microtus_ochrogaster
ENSPPAG00000023703	RPP40	98	34.911	ENSMMOG00000020591	-	99	34.911	Mola_mola
ENSPPAG00000023703	RPP40	100	79.945	ENSMODG00000009826	RPP40	100	79.945	Monodelphis_domestica
ENSPPAG00000023703	RPP40	98	39.048	ENSMALG00000020133	rpp40	99	38.375	Monopterus_albus
ENSPPAG00000023703	RPP40	100	82.920	MGP_CAROLIEiJ_G0018429	Rpp40	100	82.920	Mus_caroli
ENSPPAG00000023703	RPP40	100	83.471	ENSMUSG00000021418	Rpp40	100	83.471	Mus_musculus
ENSPPAG00000023703	RPP40	100	82.941	MGP_PahariEiJ_G0019497	Rpp40	100	82.941	Mus_pahari
ENSPPAG00000023703	RPP40	100	82.920	MGP_SPRETEiJ_G0019309	Rpp40	100	82.920	Mus_spretus
ENSPPAG00000023703	RPP40	100	85.675	ENSMPUG00000000530	RPP40	93	85.675	Mustela_putorius_furo
ENSPPAG00000023703	RPP40	100	84.298	ENSMLUG00000000501	RPP40	100	84.298	Myotis_lucifugus
ENSPPAG00000023703	RPP40	100	84.848	ENSNGAG00000023955	-	100	84.848	Nannospalax_galili
ENSPPAG00000023703	RPP40	95	76.012	ENSNGAG00000022529	-	100	76.012	Nannospalax_galili
ENSPPAG00000023703	RPP40	87	37.000	ENSNBRG00000017465	rpp40	86	37.171	Neolamprologus_brichardi
ENSPPAG00000023703	RPP40	100	96.471	ENSNLEG00000034397	RPP40	100	96.471	Nomascus_leucogenys
ENSPPAG00000023703	RPP40	100	73.554	ENSMEUG00000005300	RPP40	100	73.554	Notamacropus_eugenii
ENSPPAG00000023703	RPP40	100	83.471	ENSODEG00000007255	-	100	83.471	Octodon_degus
ENSPPAG00000023703	RPP40	100	78.788	ENSODEG00000018153	-	100	78.788	Octodon_degus
ENSPPAG00000023703	RPP40	88	83.278	ENSODEG00000006170	-	100	83.278	Octodon_degus
ENSPPAG00000023703	RPP40	98	39.216	ENSONIG00000014016	rpp40	98	39.216	Oreochromis_niloticus
ENSPPAG00000023703	RPP40	83	73.267	ENSOANG00000001200	RPP40	99	73.267	Ornithorhynchus_anatinus
ENSPPAG00000023703	RPP40	99	75.900	ENSOCUG00000000354	RPP40	99	75.900	Oryctolagus_cuniculus
ENSPPAG00000023703	RPP40	99	38.056	ENSORLG00000008242	-	100	38.056	Oryzias_latipes
ENSPPAG00000023703	RPP40	99	37.222	ENSORLG00020013745	-	91	37.222	Oryzias_latipes_hni
ENSPPAG00000023703	RPP40	99	37.778	ENSORLG00015000887	-	100	37.778	Oryzias_latipes_hsok
ENSPPAG00000023703	RPP40	99	38.227	ENSOMEG00000002747	rpp40	100	38.227	Oryzias_melastigma
ENSPPAG00000023703	RPP40	100	88.154	ENSOGAG00000006055	RPP40	100	88.154	Otolemur_garnettii
ENSPPAG00000023703	RPP40	91	79.880	ENSOARG00000018783	RPP40	100	81.518	Ovis_aries
ENSPPAG00000023703	RPP40	100	86.501	ENSPPRG00000005612	RPP40	100	86.501	Panthera_pardus
ENSPPAG00000023703	RPP40	100	79.890	ENSPTIG00000018847	RPP40	100	79.890	Panthera_tigris_altaica
ENSPPAG00000023703	RPP40	100	99.174	ENSPTRG00000017690	RPP40	100	99.174	Pan_troglodytes
ENSPPAG00000023703	RPP40	100	96.262	ENSPANG00000017865	RPP40	100	96.262	Papio_anubis
ENSPPAG00000023703	RPP40	98	50.279	ENSPKIG00000006311	rpp40	99	50.279	Paramormyrops_kingsleyae
ENSPPAG00000023703	RPP40	65	71.171	ENSPSIG00000007854	RPP40	100	71.171	Pelodiscus_sinensis
ENSPPAG00000023703	RPP40	92	77.389	ENSPEMG00000020809	Rpp40	91	77.389	Peromyscus_maniculatus_bairdii
ENSPPAG00000023703	RPP40	81	41.367	ENSPMAG00000008412	rpp40	99	45.620	Petromyzon_marinus
ENSPPAG00000023703	RPP40	100	79.614	ENSPCIG00000010682	RPP40	100	79.614	Phascolarctos_cinereus
ENSPPAG00000023703	RPP40	98	35.376	ENSPFOG00000011460	rpp40	98	35.376	Poecilia_formosa
ENSPPAG00000023703	RPP40	98	35.854	ENSPLAG00000001334	rpp40	99	35.854	Poecilia_latipinna
ENSPPAG00000023703	RPP40	98	35.574	ENSPMEG00000007721	rpp40	99	35.574	Poecilia_mexicana
ENSPPAG00000023703	RPP40	98	36.695	ENSPREG00000009215	rpp40	99	36.695	Poecilia_reticulata
ENSPPAG00000023703	RPP40	100	97.796	ENSPPYG00000016194	RPP40	100	97.796	Pongo_abelii
ENSPPAG00000023703	RPP40	51	83.152	ENSPCAG00000002700	-	99	83.152	Procavia_capensis
ENSPPAG00000023703	RPP40	100	88.785	ENSPCOG00000003907	RPP40	100	88.785	Propithecus_coquereli
ENSPPAG00000023703	RPP40	100	87.879	ENSPVAG00000011325	RPP40	100	87.879	Pteropus_vampyrus
ENSPPAG00000023703	RPP40	83	37.417	ENSPNYG00000004432	rpp40	99	37.417	Pundamilia_nyererei
ENSPPAG00000023703	RPP40	98	47.486	ENSPNAG00000019125	rpp40	99	47.486	Pygocentrus_nattereri
ENSPPAG00000023703	RPP40	100	83.196	ENSRNOG00000016226	Rpp40	100	83.498	Rattus_norvegicus
ENSPPAG00000023703	RPP40	100	97.196	ENSRBIG00000035800	RPP40	100	97.196	Rhinopithecus_bieti
ENSPPAG00000023703	RPP40	100	97.196	ENSRROG00000039116	RPP40	100	97.196	Rhinopithecus_roxellana
ENSPPAG00000023703	RPP40	100	95.592	ENSSBOG00000020297	RPP40	100	95.592	Saimiri_boliviensis_boliviensis
ENSPPAG00000023703	RPP40	77	79.137	ENSSHAG00000002102	RPP40	100	79.137	Sarcophilus_harrisii
ENSPPAG00000023703	RPP40	99	48.760	ENSSFOG00015001142	rpp40	81	48.760	Scleropages_formosus
ENSPPAG00000023703	RPP40	98	37.255	ENSSDUG00000007202	rpp40	99	37.255	Seriola_dumerili
ENSPPAG00000023703	RPP40	98	37.535	ENSSLDG00000017563	rpp40	99	37.535	Seriola_lalandi_dorsalis
ENSPPAG00000023703	RPP40	99	66.667	ENSSPUG00000017487	-	99	66.667	Sphenodon_punctatus
ENSPPAG00000023703	RPP40	81	65.424	ENSSPUG00000018950	-	100	65.424	Sphenodon_punctatus
ENSPPAG00000023703	RPP40	98	39.216	ENSSPAG00000022716	rpp40	99	39.216	Stegastes_partitus
ENSPPAG00000023703	RPP40	100	80.997	ENSSSCG00000000998	RPP40	100	80.997	Sus_scrofa
ENSPPAG00000023703	RPP40	99	65.642	ENSTGUG00000002258	-	100	65.642	Taeniopygia_guttata
ENSPPAG00000023703	RPP40	55	70.621	ENSTGUG00000015246	-	100	71.186	Taeniopygia_guttata
ENSPPAG00000023703	RPP40	97	39.093	ENSTRUG00000003755	rpp40	98	39.093	Takifugu_rubripes
ENSPPAG00000023703	RPP40	97	37.110	ENSTNIG00000003077	rpp40	98	37.110	Tetraodon_nigroviridis
ENSPPAG00000023703	RPP40	74	61.600	ENSTBEG00000014467	-	73	61.600	Tupaia_belangeri
ENSPPAG00000023703	RPP40	99	76.519	ENSTTRG00000007319	RPP40	100	76.519	Tursiops_truncatus
ENSPPAG00000023703	RPP40	100	86.777	ENSUAMG00000002159	RPP40	100	86.777	Ursus_americanus
ENSPPAG00000023703	RPP40	100	86.777	ENSUMAG00000018639	RPP40	94	86.777	Ursus_maritimus
ENSPPAG00000023703	RPP40	81	62.245	ENSVPAG00000004652	-	99	62.245	Vicugna_pacos
ENSPPAG00000023703	RPP40	100	85.675	ENSVVUG00000005451	RPP40	100	85.675	Vulpes_vulpes
ENSPPAG00000023703	RPP40	99	55.342	ENSXETG00000017617	rpp40	100	55.342	Xenopus_tropicalis
ENSPPAG00000023703	RPP40	63	42.520	ENSXCOG00000019991	-	93	30.294	Xiphophorus_couchianus
ENSPPAG00000023703	RPP40	98	31.325	ENSXMAG00000024940	rpp40	98	31.325	Xiphophorus_maculatus