EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000023820 (Gene tree)
Gene ID: 100993423
Gene Symbol: DKC1
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 14064 bases
Position: chrX:154084412-154098475
Accession: 100993423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000005887	TruB_N	PF01509.18	1.8e-20	1	1
ENSPPAP00000005887	PUA	PF01472.20	4.9e-18	1	1
ENSPPAP00000005887	DKCLD	PF08068.12	5.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000026247	DKC1-201	2601	XM_003809960	ENSPPAP00000005887	514 (aa)	XP_003810008	A0A2R8ZSQ5

Gene Model

Click here to download ENSPPAG00000023820's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000023820's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000023820	DKC1	100	99.611	ENSG00000130826	DKC1	100	99.611	Homo_sapiens
ENSPPAG00000023820	DKC1	85	81.818	ENSAPOG00000007799	dkc1	87	80.272	Acanthochromis_polyacanthus
ENSPPAG00000023820	DKC1	88	95.374	ENSAMEG00000002776	DKC1	100	90.661	Ailuropoda_melanoleuca
ENSPPAG00000023820	DKC1	86	80.499	ENSACIG00000022614	dkc1	89	82.629	Amphilophus_citrinellus
ENSPPAG00000023820	DKC1	85	81.364	ENSAOCG00000013159	dkc1	89	80.275	Amphiprion_ocellaris
ENSPPAG00000023820	DKC1	85	81.422	ENSAPEG00000002284	dkc1	89	80.275	Amphiprion_percula
ENSPPAG00000023820	DKC1	86	78.348	ENSATEG00000013682	dkc1	81	83.535	Anabas_testudineus
ENSPPAG00000023820	DKC1	86	84.667	ENSACAG00000015600	DKC1	77	84.667	Anolis_carolinensis
ENSPPAG00000023820	DKC1	100	97.276	ENSANAG00000022732	DKC1	100	97.276	Aotus_nancymaae
ENSPPAG00000023820	DKC1	77	86.616	ENSACLG00000015605	dkc1	81	86.616	Astatotilapia_calliptera
ENSPPAG00000023820	DKC1	87	80.804	ENSAMXG00000017108	dkc1	79	86.717	Astyanax_mexicanus
ENSPPAG00000023820	DKC1	100	91.440	ENSBTAG00000013045	DKC1	100	91.440	Bos_taurus
ENSPPAG00000023820	DKC1	80	67.312	WBGene00010478	K01G5.5	95	65.654	Caenorhabditis_elegans
ENSPPAG00000023820	DKC1	100	98.447	ENSCJAG00000004210	DKC1	100	98.447	Callithrix_jacchus
ENSPPAG00000023820	DKC1	96	78.800	ENSCAFG00000009311	-	96	78.600	Canis_familiaris
ENSPPAG00000023820	DKC1	100	89.695	ENSCAFG00000019620	-	97	90.316	Canis_familiaris
ENSPPAG00000023820	DKC1	100	89.695	ENSCAFG00020008918	-	97	90.316	Canis_lupus_dingo
ENSPPAG00000023820	DKC1	96	78.629	ENSCAFG00020009379	-	92	78.427	Canis_lupus_dingo
ENSPPAG00000023820	DKC1	100	91.440	ENSCHIG00000017392	DKC1	100	91.440	Capra_hircus
ENSPPAG00000023820	DKC1	99	93.666	ENSTSYG00000007681	DKC1	99	93.666	Carlito_syrichta
ENSPPAG00000023820	DKC1	85	93.793	ENSCAPG00000003342	DKC1	99	93.563	Cavia_aperea
ENSPPAG00000023820	DKC1	97	94.165	ENSCPOG00000008825	DKC1	97	94.165	Cavia_porcellus
ENSPPAG00000023820	DKC1	100	90.272	ENSCCAG00000027418	DKC1	100	90.272	Cebus_capucinus
ENSPPAG00000023820	DKC1	100	98.833	ENSCATG00000033602	DKC1	100	98.833	Cercocebus_atys
ENSPPAG00000023820	DKC1	99	93.701	ENSCLAG00000000720	DKC1	100	93.701	Chinchilla_lanigera
ENSPPAG00000023820	DKC1	100	99.027	ENSCSAG00000006706	DKC1	100	99.027	Chlorocebus_sabaeus
ENSPPAG00000023820	DKC1	92	83.087	ENSCPBG00000005858	DKC1	93	87.045	Chrysemys_picta_bellii
ENSPPAG00000023820	DKC1	84	74.943	ENSCING00000004599	-	83	74.886	Ciona_intestinalis
ENSPPAG00000023820	DKC1	81	76.145	ENSCSAVG00000010047	-	93	76.329	Ciona_savignyi
ENSPPAG00000023820	DKC1	100	99.027	ENSCANG00000027987	DKC1	100	99.027	Colobus_angolensis_palliatus
ENSPPAG00000023820	DKC1	96	65.112	ENSCGRG00001016789	-	88	67.955	Cricetulus_griseus_chok1gshd
ENSPPAG00000023820	DKC1	97	91.952	ENSCGRG00001014574	-	97	91.952	Cricetulus_griseus_chok1gshd
ENSPPAG00000023820	DKC1	98	64.683	ENSCGRG00000014809	-	86	67.955	Cricetulus_griseus_crigri
ENSPPAG00000023820	DKC1	97	91.952	ENSCGRG00000016075	-	97	91.952	Cricetulus_griseus_crigri
ENSPPAG00000023820	DKC1	87	79.596	ENSCSEG00000012633	dkc1	92	81.250	Cynoglossus_semilaevis
ENSPPAG00000023820	DKC1	85	80.365	ENSCVAG00000010155	dkc1	83	80.365	Cyprinodon_variegatus
ENSPPAG00000023820	DKC1	79	85.185	ENSDARG00000016484	dkc1	79	86.216	Danio_rerio
ENSPPAG00000023820	DKC1	100	92.023	ENSDNOG00000004218	DKC1	100	92.023	Dasypus_novemcinctus
ENSPPAG00000023820	DKC1	58	83.000	ENSDORG00000013566	-	100	83.000	Dipodomys_ordii
ENSPPAG00000023820	DKC1	86	69.841	FBgn0259937	Nop60B	89	68.473	Drosophila_melanogaster
ENSPPAG00000023820	DKC1	91	87.794	ENSETEG00000016095	DKC1	99	87.169	Echinops_telfairi
ENSPPAG00000023820	DKC1	66	77.811	ENSEBUG00000015962	dkc1	99	81.911	Eptatretus_burgeri
ENSPPAG00000023820	DKC1	100	91.603	ENSEASG00005007484	DKC1	100	91.031	Equus_asinus_asinus
ENSPPAG00000023820	DKC1	100	91.603	ENSECAG00000023524	DKC1	100	91.031	Equus_caballus
ENSPPAG00000023820	DKC1	83	90.353	ENSEEUG00000003323	DKC1	99	91.190	Erinaceus_europaeus
ENSPPAG00000023820	DKC1	88	78.681	ENSELUG00000014538	dkc1	87	81.818	Esox_lucius
ENSPPAG00000023820	DKC1	100	92.023	ENSFCAG00000006577	DKC1	100	90.856	Felis_catus
ENSPPAG00000023820	DKC1	85	83.747	ENSFALG00000011496	DKC1	85	82.705	Ficedula_albicollis
ENSPPAG00000023820	DKC1	96	92.886	ENSFDAG00000002516	DKC1	100	92.731	Fukomys_damarensis
ENSPPAG00000023820	DKC1	86	80.499	ENSFHEG00000004627	dkc1	89	77.802	Fundulus_heteroclitus
ENSPPAG00000023820	DKC1	76	83.376	ENSGMOG00000017277	dkc1	100	83.376	Gadus_morhua
ENSPPAG00000023820	DKC1	85	86.697	ENSGALG00000005054	DKC1	85	85.811	Gallus_gallus
ENSPPAG00000023820	DKC1	85	80.682	ENSGAFG00000011486	dkc1	71	81.882	Gambusia_affinis
ENSPPAG00000023820	DKC1	77	87.121	ENSGACG00000004373	dkc1	96	88.754	Gasterosteus_aculeatus
ENSPPAG00000023820	DKC1	92	83.510	ENSGAGG00000011330	DKC1	89	84.665	Gopherus_agassizii
ENSPPAG00000023820	DKC1	100	99.611	ENSGGOG00000001045	DKC1	100	99.611	Gorilla_gorilla
ENSPPAG00000023820	DKC1	86	80.726	ENSHBUG00000012436	dkc1	86	80.361	Haplochromis_burtoni
ENSPPAG00000023820	DKC1	97	93.200	ENSHGLG00000000649	DKC1	100	93.230	Heterocephalus_glaber_female
ENSPPAG00000023820	DKC1	96	93.117	ENSHGLG00100001153	DKC1	100	93.151	Heterocephalus_glaber_male
ENSPPAG00000023820	DKC1	86	79.819	ENSHCOG00000021099	dkc1	86	80.499	Hippocampus_comes
ENSPPAG00000023820	DKC1	90	77.970	ENSIPUG00000010309	dkc1	88	77.802	Ictalurus_punctatus
ENSPPAG00000023820	DKC1	97	86.117	ENSSTOG00000020149	-	100	85.019	Ictidomys_tridecemlineatus
ENSPPAG00000023820	DKC1	91	95.717	ENSSTOG00000001074	-	99	95.464	Ictidomys_tridecemlineatus
ENSPPAG00000023820	DKC1	97	84.168	ENSSTOG00000011904	-	93	84.168	Ictidomys_tridecemlineatus
ENSPPAG00000023820	DKC1	58	84.000	ENSJJAG00000010086	-	100	84.000	Jaculus_jaculus
ENSPPAG00000023820	DKC1	86	79.007	ENSKMAG00000008010	dkc1	85	80.998	Kryptolebias_marmoratus
ENSPPAG00000023820	DKC1	85	80.866	ENSLBEG00000019122	dkc1	92	79.095	Labrus_bergylta
ENSPPAG00000023820	DKC1	87	82.183	ENSLACG00000014025	DKC1	91	88.693	Latimeria_chalumnae
ENSPPAG00000023820	DKC1	86	82.550	ENSLOCG00000013713	dkc1	87	83.879	Lepisosteus_oculatus
ENSPPAG00000023820	DKC1	96	91.549	ENSLAFG00000000221	DKC1	97	90.946	Loxodonta_africana
ENSPPAG00000023820	DKC1	100	98.833	ENSMFAG00000032398	DKC1	86	98.833	Macaca_fascicularis
ENSPPAG00000023820	DKC1	100	99.027	ENSMMUG00000005768	DKC1	100	99.027	Macaca_mulatta
ENSPPAG00000023820	DKC1	100	99.027	ENSMNEG00000034503	DKC1	100	99.027	Macaca_nemestrina
ENSPPAG00000023820	DKC1	100	99.027	ENSMLEG00000034422	DKC1	100	99.027	Mandrillus_leucophaeus
ENSPPAG00000023820	DKC1	80	84.841	ENSMAMG00000005427	dkc1	90	86.070	Mastacembelus_armatus
ENSPPAG00000023820	DKC1	86	80.952	ENSMZEG00005014503	dkc1	86	80.587	Maylandia_zebra
ENSPPAG00000023820	DKC1	77	86.683	ENSMGAG00000009238	DKC1	87	84.275	Meleagris_gallopavo
ENSPPAG00000023820	DKC1	58	83.667	ENSMAUG00000016454	-	100	83.667	Mesocricetus_auratus
ENSPPAG00000023820	DKC1	89	84.348	ENSMICG00000002818	-	99	84.348	Microcebus_murinus
ENSPPAG00000023820	DKC1	100	92.293	ENSMICG00000038751	-	100	92.293	Microcebus_murinus
ENSPPAG00000023820	DKC1	58	80.667	ENSMOCG00000001169	-	100	80.667	Microtus_ochrogaster
ENSPPAG00000023820	DKC1	77	86.364	ENSMMOG00000020348	dkc1	87	85.930	Mola_mola
ENSPPAG00000023820	DKC1	89	85.526	ENSMODG00000009243	DKC1	77	86.384	Monodelphis_domestica
ENSPPAG00000023820	DKC1	85	80.909	ENSMALG00000009454	dkc1	79	85.965	Monopterus_albus
ENSPPAG00000023820	DKC1	97	80.000	MGP_CAROLIEiJ_G0033191	Dkc1	100	92.568	Mus_caroli
ENSPPAG00000023820	DKC1	97	90.543	ENSMUSG00000031403	Dkc1	97	90.744	Mus_musculus
ENSPPAG00000023820	DKC1	97	90.141	MGP_PahariEiJ_G0031735	Dkc1	97	90.141	Mus_pahari
ENSPPAG00000023820	DKC1	97	90.342	MGP_SPRETEiJ_G0034351	Dkc1	97	91.348	Mus_spretus
ENSPPAG00000023820	DKC1	97	89.349	ENSMPUG00000016136	DKC1	93	90.730	Mustela_putorius_furo
ENSPPAG00000023820	DKC1	90	86.296	ENSMLUG00000011918	DKC1	100	83.525	Myotis_lucifugus
ENSPPAG00000023820	DKC1	58	83.667	ENSNGAG00000015724	-	100	83.667	Nannospalax_galili
ENSPPAG00000023820	DKC1	77	87.121	ENSNBRG00000005638	dkc1	80	87.121	Neolamprologus_brichardi
ENSPPAG00000023820	DKC1	100	99.222	ENSNLEG00000014323	DKC1	100	99.222	Nomascus_leucogenys
ENSPPAG00000023820	DKC1	82	86.052	ENSMEUG00000001066	DKC1	95	83.141	Notamacropus_eugenii
ENSPPAG00000023820	DKC1	99	75.049	ENSOPRG00000005248	DKC1	100	75.049	Ochotona_princeps
ENSPPAG00000023820	DKC1	85	95.872	ENSODEG00000011816	-	91	94.194	Octodon_degus
ENSPPAG00000023820	DKC1	58	85.000	ENSODEG00000000549	-	100	85.000	Octodon_degus
ENSPPAG00000023820	DKC1	94	74.600	ENSONIG00000013889	dkc1	96	74.803	Oreochromis_niloticus
ENSPPAG00000023820	DKC1	93	86.722	ENSOANG00000008713	-	96	86.994	Ornithorhynchus_anatinus
ENSPPAG00000023820	DKC1	66	64.124	ENSOANG00000022295	-	84	65.781	Ornithorhynchus_anatinus
ENSPPAG00000023820	DKC1	97	93.561	ENSOCUG00000012646	DKC1	100	92.427	Oryctolagus_cuniculus
ENSPPAG00000023820	DKC1	91	76.609	ENSORLG00000018748	dkc1	78	85.570	Oryzias_latipes
ENSPPAG00000023820	DKC1	78	84.615	ENSOMEG00000005786	dkc1	82	85.356	Oryzias_melastigma
ENSPPAG00000023820	DKC1	100	91.031	ENSOGAG00000003399	DKC1	100	91.412	Otolemur_garnettii
ENSPPAG00000023820	DKC1	100	90.661	ENSOARG00000003047	DKC1	100	90.467	Ovis_aries
ENSPPAG00000023820	DKC1	91	93.991	ENSPPRG00000009104	DKC1	100	90.856	Panthera_pardus
ENSPPAG00000023820	DKC1	90	90.889	ENSPTIG00000017469	DKC1	99	88.016	Panthera_tigris_altaica
ENSPPAG00000023820	DKC1	100	99.611	ENSPTRG00000022449	DKC1	100	99.611	Pan_troglodytes
ENSPPAG00000023820	DKC1	98	99.604	ENSPTRG00000043416	-	85	99.604	Pan_troglodytes
ENSPPAG00000023820	DKC1	100	99.027	ENSPANG00000011978	DKC1	100	99.027	Papio_anubis
ENSPPAG00000023820	DKC1	85	81.881	ENSPKIG00000008443	dkc1	86	85.539	Paramormyrops_kingsleyae
ENSPPAG00000023820	DKC1	72	90.054	ENSPSIG00000013765	DKC1	86	92.997	Pelodiscus_sinensis
ENSPPAG00000023820	DKC1	86	75.615	ENSPMGG00000004097	dkc1	73	82.323	Periophthalmus_magnuspinnatus
ENSPPAG00000023820	DKC1	81	95.897	ENSPEMG00000013348	Dkc1	96	95.897	Peromyscus_maniculatus_bairdii
ENSPPAG00000023820	DKC1	87	87.751	ENSPCIG00000016706	DKC1	75	87.751	Phascolarctos_cinereus
ENSPPAG00000023820	DKC1	86	81.179	ENSPFOG00000018653	dkc1	85	80.682	Poecilia_formosa
ENSPPAG00000023820	DKC1	86	81.179	ENSPLAG00000003272	dkc1	77	80.682	Poecilia_latipinna
ENSPPAG00000023820	DKC1	86	81.179	ENSPMEG00000010413	dkc1	83	82.160	Poecilia_mexicana
ENSPPAG00000023820	DKC1	86	81.179	ENSPREG00000004100	dkc1	77	86.364	Poecilia_reticulata
ENSPPAG00000023820	DKC1	99	99.411	ENSPPYG00000020892	DKC1	100	99.411	Pongo_abelii
ENSPPAG00000023820	DKC1	73	94.370	ENSPCAG00000015034	DKC1	73	94.370	Procavia_capensis
ENSPPAG00000023820	DKC1	100	94.747	ENSPCOG00000026874	DKC1	100	94.747	Propithecus_coquereli
ENSPPAG00000023820	DKC1	97	89.738	ENSPVAG00000009222	DKC1	97	90.141	Pteropus_vampyrus
ENSPPAG00000023820	DKC1	86	80.000	ENSPNYG00000020063	dkc1	88	80.000	Pundamilia_nyererei
ENSPPAG00000023820	DKC1	90	79.957	ENSPNAG00000005780	dkc1	87	79.957	Pygocentrus_nattereri
ENSPPAG00000023820	DKC1	96	82.056	ENSRNOG00000055562	Dkc1	97	81.690	Rattus_norvegicus
ENSPPAG00000023820	DKC1	100	99.027	ENSRBIG00000028457	DKC1	86	99.027	Rhinopithecus_bieti
ENSPPAG00000023820	DKC1	100	99.027	ENSRROG00000044780	DKC1	100	99.027	Rhinopithecus_roxellana
ENSPPAG00000023820	DKC1	75	71.615	YLR175W	-	80	71.615	Saccharomyces_cerevisiae
ENSPPAG00000023820	DKC1	100	98.252	ENSSBOG00000033746	DKC1	100	98.252	Saimiri_boliviensis_boliviensis
ENSPPAG00000023820	DKC1	89	87.281	ENSSHAG00000002463	DKC1	94	87.751	Sarcophilus_harrisii
ENSPPAG00000023820	DKC1	90	79.741	ENSSFOG00015009585	dkc1	89	79.654	Scleropages_formosus
ENSPPAG00000023820	DKC1	86	80.313	ENSSMAG00000002552	dkc1	85	82.938	Scophthalmus_maximus
ENSPPAG00000023820	DKC1	85	82.151	ENSSDUG00000009963	dkc1	86	79.955	Seriola_dumerili
ENSPPAG00000023820	DKC1	85	80.778	ENSSLDG00000019342	dkc1	90	82.326	Seriola_lalandi_dorsalis
ENSPPAG00000023820	DKC1	98	83.068	ENSSARG00000001822	DKC1	96	82.787	Sorex_araneus
ENSPPAG00000023820	DKC1	84	86.270	ENSSPUG00000018907	DKC1	86	83.516	Sphenodon_punctatus
ENSPPAG00000023820	DKC1	86	80.090	ENSSPAG00000002585	dkc1	84	80.822	Stegastes_partitus
ENSPPAG00000023820	DKC1	100	90.286	ENSSSCG00000012823	DKC1	100	90.667	Sus_scrofa
ENSPPAG00000023820	DKC1	78	86.000	ENSTGUG00000006781	DKC1	87	85.714	Taeniopygia_guttata
ENSPPAG00000023820	DKC1	86	81.179	ENSTRUG00000004413	dkc1	83	83.255	Takifugu_rubripes
ENSPPAG00000023820	DKC1	95	62.978	ENSTNIG00000002582	dkc1	83	67.209	Tetraodon_nigroviridis
ENSPPAG00000023820	DKC1	71	92.582	ENSTBEG00000011262	DKC1	100	92.308	Tupaia_belangeri
ENSPPAG00000023820	DKC1	74	91.803	ENSTTRG00000008089	DKC1	74	91.803	Tursiops_truncatus
ENSPPAG00000023820	DKC1	95	91.348	ENSUAMG00000022721	DKC1	95	94.678	Ursus_americanus
ENSPPAG00000023820	DKC1	95	90.946	ENSUMAG00000016899	DKC1	92	98.413	Ursus_maritimus
ENSPPAG00000023820	DKC1	99	88.403	ENSVVUG00000020734	-	87	89.370	Vulpes_vulpes
ENSPPAG00000023820	DKC1	96	73.547	ENSVVUG00000021671	-	91	73.600	Vulpes_vulpes
ENSPPAG00000023820	DKC1	90	79.826	ENSXETG00000032517	DKC1	83	85.817	Xenopus_tropicalis
ENSPPAG00000023820	DKC1	86	79.864	ENSXCOG00000005498	dkc1	85	85.859	Xiphophorus_couchianus
ENSPPAG00000023820	DKC1	86	80.726	ENSXMAG00000004919	dkc1	83	81.925	Xiphophorus_maculatus