EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000024582 (Gene tree)
Gene ID: 100974044
Gene Symbol: HFM1
Alias: -
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 132761 bases
Position: chr1:92669768-92802528
Accession: 100974044
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000006191	ResIII	PF04851.15	9.8e-12	1	1
ENSPPAP00000006191	DEAD	PF00270.29	2.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000027114	HFM1-201	4917	XM_003808406	ENSPPAP00000006191	1324 (aa)	XP_003808454	A0A2R8ZQA9

Gene Model

Click here to download ENSPPAG00000024582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000024582's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000024582	HFM1	55	34.637	ENSPPAG00000030772	ASCC3	63	34.637
ENSPPAG00000024582	HFM1	66	31.488	ENSPPAG00000041559	SNRNP200	77	31.488

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000024582	HFM1	100	99.698	ENSG00000162669	HFM1	100	100.000	Homo_sapiens
ENSPPAG00000024582	HFM1	69	65.425	ENSAPOG00000005304	hfm1	100	65.425	Acanthochromis_polyacanthus
ENSPPAG00000024582	HFM1	99	87.641	ENSAMEG00000000432	HFM1	92	87.641	Ailuropoda_melanoleuca
ENSPPAG00000024582	HFM1	76	60.916	ENSACIG00000021553	hfm1	91	60.916	Amphilophus_citrinellus
ENSPPAG00000024582	HFM1	69	66.044	ENSAOCG00000022839	hfm1	100	66.044	Amphiprion_ocellaris
ENSPPAG00000024582	HFM1	69	65.694	ENSAPEG00000014316	hfm1	96	69.785	Amphiprion_percula
ENSPPAG00000024582	HFM1	72	64.603	ENSATEG00000019181	hfm1	80	63.755	Anabas_testudineus
ENSPPAG00000024582	HFM1	98	64.145	ENSAPLG00000013639	HFM1	91	64.145	Anas_platyrhynchos
ENSPPAG00000024582	HFM1	100	92.760	ENSANAG00000029513	HFM1	92	92.760	Aotus_nancymaae
ENSPPAG00000024582	HFM1	70	63.948	ENSACLG00000009033	hfm1	97	65.554	Astatotilapia_calliptera
ENSPPAG00000024582	HFM1	99	52.718	ENSAMXG00000006108	hfm1	89	52.718	Astyanax_mexicanus
ENSPPAG00000024582	HFM1	99	86.285	ENSBTAG00000020856	HFM1	92	86.285	Bos_taurus
ENSPPAG00000024582	HFM1	100	94.260	ENSCJAG00000001843	HFM1	92	94.260	Callithrix_jacchus
ENSPPAG00000024582	HFM1	99	87.330	ENSCAFG00000020187	HFM1	92	87.330	Canis_familiaris
ENSPPAG00000024582	HFM1	100	88.479	ENSTSYG00000014250	HFM1	92	88.479	Carlito_syrichta
ENSPPAG00000024582	HFM1	99	81.339	ENSCPOG00000007421	HFM1	94	81.339	Cavia_porcellus
ENSPPAG00000024582	HFM1	100	94.260	ENSCCAG00000033206	HFM1	92	94.260	Cebus_capucinus
ENSPPAG00000024582	HFM1	100	97.281	ENSCATG00000030987	HFM1	92	97.281	Cercocebus_atys
ENSPPAG00000024582	HFM1	100	82.713	ENSCLAG00000005173	HFM1	92	82.713	Chinchilla_lanigera
ENSPPAG00000024582	HFM1	66	96.053	ENSCHOG00000011824	-	68	96.053	Choloepus_hoffmanni
ENSPPAG00000024582	HFM1	52	53.621	ENSCSAVG00000005094	-	100	53.621	Ciona_savignyi
ENSPPAG00000024582	HFM1	100	75.075	ENSCGRG00001016995	Hfm1	92	75.075	Cricetulus_griseus_chok1gshd
ENSPPAG00000024582	HFM1	100	79.669	ENSCGRG00000017181	Hfm1	92	79.669	Cricetulus_griseus_crigri
ENSPPAG00000024582	HFM1	76	60.815	ENSCSEG00000017659	hfm1	93	60.815	Cynoglossus_semilaevis
ENSPPAG00000024582	HFM1	54	69.382	ENSCVAG00000005075	hfm1	86	69.382	Cyprinodon_variegatus
ENSPPAG00000024582	HFM1	65	66.472	ENSDARG00000104288	hfm1	77	66.472	Danio_rerio
ENSPPAG00000024582	HFM1	100	82.216	ENSDNOG00000004776	HFM1	92	82.216	Dasypus_novemcinctus
ENSPPAG00000024582	HFM1	100	80.743	ENSDORG00000014661	Hfm1	92	80.743	Dipodomys_ordii
ENSPPAG00000024582	HFM1	76	85.587	ENSEASG00005015424	HFM1	98	85.870	Equus_asinus_asinus
ENSPPAG00000024582	HFM1	100	86.016	ENSECAG00000024039	HFM1	93	86.016	Equus_caballus
ENSPPAG00000024582	HFM1	70	67.130	ENSELUG00000018944	hfm1	99	66.975	Esox_lucius
ENSPPAG00000024582	HFM1	99	87.717	ENSFCAG00000029116	HFM1	92	87.717	Felis_catus
ENSPPAG00000024582	HFM1	99	62.277	ENSFALG00000001781	HFM1	92	62.744	Ficedula_albicollis
ENSPPAG00000024582	HFM1	100	81.060	ENSFDAG00000020816	HFM1	93	81.060	Fukomys_damarensis
ENSPPAG00000024582	HFM1	72	60.938	ENSGMOG00000017436	hfm1	100	60.938	Gadus_morhua
ENSPPAG00000024582	HFM1	77	62.196	ENSGAFG00000018093	hfm1	93	67.391	Gambusia_affinis
ENSPPAG00000024582	HFM1	72	62.526	ENSGACG00000015686	hfm1	100	62.526	Gasterosteus_aculeatus
ENSPPAG00000024582	HFM1	100	99.169	ENSGGOG00000038524	HFM1	92	99.169	Gorilla_gorilla
ENSPPAG00000024582	HFM1	70	65.021	ENSHBUG00000007309	hfm1	97	60.019	Haplochromis_burtoni
ENSPPAG00000024582	HFM1	61	64.461	ENSHCOG00000019632	hfm1	97	64.461	Hippocampus_comes
ENSPPAG00000024582	HFM1	71	64.842	ENSIPUG00000017020	hfm1	92	65.952	Ictalurus_punctatus
ENSPPAG00000024582	HFM1	100	79.713	ENSJJAG00000017198	Hfm1	92	79.713	Jaculus_jaculus
ENSPPAG00000024582	HFM1	67	63.929	ENSKMAG00000002282	hfm1	90	63.929	Kryptolebias_marmoratus
ENSPPAG00000024582	HFM1	76	60.806	ENSLBEG00000006759	hfm1	98	65.416	Labrus_bergylta
ENSPPAG00000024582	HFM1	72	71.074	ENSLACG00000010698	HFM1	99	67.204	Latimeria_chalumnae
ENSPPAG00000024582	HFM1	78	64.756	ENSLOCG00000004931	hfm1	96	64.852	Lepisosteus_oculatus
ENSPPAG00000024582	HFM1	56	90.310	ENSLAFG00000015903	-	99	90.310	Loxodonta_africana
ENSPPAG00000024582	HFM1	100	93.534	ENSMFAG00000003649	HFM1	92	93.534	Macaca_fascicularis
ENSPPAG00000024582	HFM1	100	96.752	ENSMMUG00000006819	HFM1	92	96.752	Macaca_mulatta
ENSPPAG00000024582	HFM1	59	70.897	ENSMAMG00000004623	hfm1	97	67.150	Mastacembelus_armatus
ENSPPAG00000024582	HFM1	70	63.948	ENSMZEG00005004679	hfm1	97	65.554	Maylandia_zebra
ENSPPAG00000024582	HFM1	59	77.679	ENSMGAG00000008437	HFM1	98	77.679	Meleagris_gallopavo
ENSPPAG00000024582	HFM1	100	79.759	ENSMAUG00000018858	Hfm1	92	79.759	Mesocricetus_auratus
ENSPPAG00000024582	HFM1	99	89.977	ENSMICG00000037935	HFM1	92	89.977	Microcebus_murinus
ENSPPAG00000024582	HFM1	100	78.222	ENSMOCG00000014812	Hfm1	92	78.222	Microtus_ochrogaster
ENSPPAG00000024582	HFM1	67	64.574	ENSMMOG00000006148	hfm1	96	64.658	Mola_mola
ENSPPAG00000024582	HFM1	70	64.568	ENSMALG00000002401	hfm1	96	65.851	Monopterus_albus
ENSPPAG00000024582	HFM1	94	74.501	MGP_CAROLIEiJ_G0027496	Hfm1	97	72.165	Mus_caroli
ENSPPAG00000024582	HFM1	100	79.050	ENSMUSG00000043410	Hfm1	100	73.850	Mus_musculus
ENSPPAG00000024582	HFM1	100	78.824	MGP_PahariEiJ_G0017268	Hfm1	100	74.334	Mus_pahari
ENSPPAG00000024582	HFM1	100	78.824	MGP_SPRETEiJ_G0028495	Hfm1	100	73.608	Mus_spretus
ENSPPAG00000024582	HFM1	99	83.309	ENSMPUG00000004594	HFM1	92	83.309	Mustela_putorius_furo
ENSPPAG00000024582	HFM1	100	85.628	ENSMLUG00000010200	HFM1	92	85.628	Myotis_lucifugus
ENSPPAG00000024582	HFM1	70	60.772	ENSNBRG00000002910	hfm1	97	65.939	Neolamprologus_brichardi
ENSPPAG00000024582	HFM1	100	93.741	ENSNLEG00000010285	HFM1	92	93.741	Nomascus_leucogenys
ENSPPAG00000024582	HFM1	91	66.954	ENSMEUG00000015788	HFM1	84	66.954	Notamacropus_eugenii
ENSPPAG00000024582	HFM1	83	78.675	ENSOPRG00000013916	HFM1	77	78.675	Ochotona_princeps
ENSPPAG00000024582	HFM1	77	62.695	ENSONIG00000010590	hfm1	99	62.645	Oreochromis_niloticus
ENSPPAG00000024582	HFM1	61	66.298	ENSORLG00000026844	hfm1	99	66.298	Oryzias_latipes
ENSPPAG00000024582	HFM1	92	49.516	ENSORLG00020002951	hfm1	96	49.597	Oryzias_latipes_hni
ENSPPAG00000024582	HFM1	97	52.480	ENSOMEG00000016474	hfm1	90	52.406	Oryzias_melastigma
ENSPPAG00000024582	HFM1	93	88.925	ENSOGAG00000032369	HFM1	100	88.925	Otolemur_garnettii
ENSPPAG00000024582	HFM1	99	86.521	ENSOARG00000015812	HFM1	92	86.521	Ovis_aries
ENSPPAG00000024582	HFM1	99	87.566	ENSPPRG00000003270	HFM1	92	87.566	Panthera_pardus
ENSPPAG00000024582	HFM1	99	87.641	ENSPTIG00000018881	HFM1	92	87.641	Panthera_tigris_altaica
ENSPPAG00000024582	HFM1	100	99.698	ENSPTRG00000000948	HFM1	92	99.698	Pan_troglodytes
ENSPPAG00000024582	HFM1	100	97.130	ENSPANG00000009838	HFM1	92	97.130	Papio_anubis
ENSPPAG00000024582	HFM1	67	67.640	ENSPKIG00000003810	hfm1	95	67.995	Paramormyrops_kingsleyae
ENSPPAG00000024582	HFM1	62	66.505	ENSPMGG00000011059	hfm1	100	66.505	Periophthalmus_magnuspinnatus
ENSPPAG00000024582	HFM1	100	81.989	ENSPEMG00000022852	Hfm1	92	81.989	Peromyscus_maniculatus_bairdii
ENSPPAG00000024582	HFM1	100	68.863	ENSPCIG00000014233	HFM1	93	68.863	Phascolarctos_cinereus
ENSPPAG00000024582	HFM1	76	62.736	ENSPFOG00000017194	hfm1	99	63.208	Poecilia_formosa
ENSPPAG00000024582	HFM1	77	64.849	ENSPLAG00000000571	hfm1	92	64.849	Poecilia_latipinna
ENSPPAG00000024582	HFM1	77	64.403	ENSPMEG00000019475	hfm1	92	64.403	Poecilia_mexicana
ENSPPAG00000024582	HFM1	76	63.941	ENSPREG00000007803	hfm1	93	67.110	Poecilia_reticulata
ENSPPAG00000024582	HFM1	100	98.792	ENSPPYG00000001163	HFM1	92	98.792	Pongo_abelii
ENSPPAG00000024582	HFM1	68	82.883	ENSPCAG00000004289	-	63	82.883	Procavia_capensis
ENSPPAG00000024582	HFM1	100	78.566	ENSPVAG00000009713	HFM1	92	78.566	Pteropus_vampyrus
ENSPPAG00000024582	HFM1	70	63.734	ENSPNYG00000001795	hfm1	97	65.435	Pundamilia_nyererei
ENSPPAG00000024582	HFM1	64	67.730	ENSPNAG00000010865	hfm1	84	67.730	Pygocentrus_nattereri
ENSPPAG00000024582	HFM1	100	77.769	ENSRNOG00000023299	Hfm1	92	77.769	Rattus_norvegicus
ENSPPAG00000024582	HFM1	100	97.054	ENSRROG00000045569	HFM1	92	97.054	Rhinopithecus_roxellana
ENSPPAG00000024582	HFM1	100	91.692	ENSSBOG00000027456	HFM1	92	91.692	Saimiri_boliviensis_boliviensis
ENSPPAG00000024582	HFM1	65	72.023	ENSSHAG00000014616	-	98	72.023	Sarcophilus_harrisii
ENSPPAG00000024582	HFM1	93	56.860	ENSSFOG00015020129	hfm1	83	56.860	Scleropages_formosus
ENSPPAG00000024582	HFM1	67	65.140	ENSSMAG00000006907	hfm1	87	65.140	Scophthalmus_maximus
ENSPPAG00000024582	HFM1	70	64.761	ENSSDUG00000011424	hfm1	100	64.761	Seriola_dumerili
ENSPPAG00000024582	HFM1	70	65.041	ENSSLDG00000016386	hfm1	100	65.041	Seriola_lalandi_dorsalis
ENSPPAG00000024582	HFM1	67	67.026	ENSSPAG00000001023	hfm1	100	67.026	Stegastes_partitus
ENSPPAG00000024582	HFM1	100	83.321	ENSSSCG00000006912	HFM1	98	83.271	Sus_scrofa
ENSPPAG00000024582	HFM1	72	75.340	ENSTGUG00000006172	HFM1	100	75.340	Taeniopygia_guttata
ENSPPAG00000024582	HFM1	98	87.760	ENSTTRG00000013933	HFM1	91	87.760	Tursiops_truncatus
ENSPPAG00000024582	HFM1	92	85.456	ENSVPAG00000011331	HFM1	85	85.456	Vicugna_pacos
ENSPPAG00000024582	HFM1	76	82.865	ENSVVUG00000020760	HFM1	99	82.865	Vulpes_vulpes
ENSPPAG00000024582	HFM1	63	67.184	ENSXMAG00000004178	hfm1	92	67.184	Xiphophorus_maculatus