EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000024635 (Gene tree)
Gene ID: 100978447
Gene Symbol: SBNO1
Alias: -
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 57681 bases
Position: chr12:125121471-125179151
Accession: 100978447
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000006398	ResIII	PF04851.15	1.2e-07	1	1
ENSPPAP00000006389	ResIII	PF04851.15	1.2e-07	1	1
ENSPPAP00000006384	ResIII	PF04851.15	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000027618	SBNO1-203	3813	-	ENSPPAP00000006398	1270 (aa)	-	A0A2R8ZN65
ENSPPAT00000027601	SBNO1-202	4074	-	ENSPPAP00000006389	1357 (aa)	-	A0A2R8ZN57
ENSPPAT00000027586	SBNO1-201	8023	XM_003812104	ENSPPAP00000006384	1393 (aa)	XP_003812152	A0A2R8ZN50

Gene Model

Click here to download ENSPPAG00000024635's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000024635's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000024635	SBNO1	71	68.481	ENSPPAG00000032482	SBNO2	74	68.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000024635	SBNO1	100	99.856	ENSG00000139697	SBNO1	100	99.856	Homo_sapiens
ENSPPAG00000024635	SBNO1	83	83.214	ENSAPOG00000003196	sbno1	98	81.083	Acanthochromis_polyacanthus
ENSPPAG00000024635	SBNO1	100	97.851	ENSAMEG00000015151	SBNO1	100	97.851	Ailuropoda_melanoleuca
ENSPPAG00000024635	SBNO1	99	81.930	ENSACIG00000008088	sbno1	95	81.930	Amphilophus_citrinellus
ENSPPAG00000024635	SBNO1	99	82.500	ENSAOCG00000014859	sbno1	99	75.070	Amphiprion_ocellaris
ENSPPAG00000024635	SBNO1	99	82.500	ENSAPEG00000006069	sbno1	99	75.070	Amphiprion_percula
ENSPPAG00000024635	SBNO1	99	84.810	ENSATEG00000006667	sbno1	95	84.810	Anabas_testudineus
ENSPPAG00000024635	SBNO1	99	95.479	ENSAPLG00000015674	SBNO1	100	92.037	Anas_platyrhynchos
ENSPPAG00000024635	SBNO1	99	94.086	ENSACAG00000015441	SBNO1	84	94.424	Anolis_carolinensis
ENSPPAG00000024635	SBNO1	100	98.636	ENSANAG00000029958	-	100	98.636	Aotus_nancymaae
ENSPPAG00000024635	SBNO1	99	76.120	ENSACLG00000024913	sbno1	99	76.281	Astatotilapia_calliptera
ENSPPAG00000024635	SBNO1	99	87.027	ENSAMXG00000019473	sbno1	95	87.027	Astyanax_mexicanus
ENSPPAG00000024635	SBNO1	99	98.132	ENSBTAG00000020505	SBNO1	99	98.132	Bos_taurus
ENSPPAG00000024635	SBNO1	100	98.780	ENSCJAG00000016599	SBNO1	100	98.780	Callithrix_jacchus
ENSPPAG00000024635	SBNO1	100	97.993	ENSCAFG00000007503	SBNO1	100	97.993	Canis_familiaris
ENSPPAG00000024635	SBNO1	100	97.638	ENSCAFG00020015363	SBNO1	100	97.638	Canis_lupus_dingo
ENSPPAG00000024635	SBNO1	99	98.266	ENSCHIG00000008382	SBNO1	99	98.551	Capra_hircus
ENSPPAG00000024635	SBNO1	99	99.638	ENSTSYG00000012749	SBNO1	100	98.452	Carlito_syrichta
ENSPPAG00000024635	SBNO1	97	99.101	ENSCAPG00000000384	SBNO1	100	97.521	Cavia_aperea
ENSPPAG00000024635	SBNO1	99	99.096	ENSCPOG00000008109	SBNO1	100	98.221	Cavia_porcellus
ENSPPAG00000024635	SBNO1	99	95.640	ENSCCAG00000035316	SBNO1	99	95.504	Cebus_capucinus
ENSPPAG00000024635	SBNO1	99	99.819	ENSCATG00000008239	SBNO1	99	99.640	Cercocebus_atys
ENSPPAG00000024635	SBNO1	99	99.096	ENSCLAG00000008995	SBNO1	100	98.221	Chinchilla_lanigera
ENSPPAG00000024635	SBNO1	85	99.482	ENSCSAG00000002064	SBNO1	100	99.482	Chlorocebus_sabaeus
ENSPPAG00000024635	SBNO1	96	94.519	ENSCHOG00000008814	SBNO1	96	94.519	Choloepus_hoffmanni
ENSPPAG00000024635	SBNO1	99	95.161	ENSCPBG00000025968	SBNO1	99	92.121	Chrysemys_picta_bellii
ENSPPAG00000024635	SBNO1	100	94.050	ENSCANG00000042688	-	100	94.050	Colobus_angolensis_palliatus
ENSPPAG00000024635	SBNO1	100	97.717	ENSCGRG00001017470	Sbno1	100	97.717	Cricetulus_griseus_chok1gshd
ENSPPAG00000024635	SBNO1	100	97.717	ENSCGRG00000004756	Sbno1	100	97.717	Cricetulus_griseus_crigri
ENSPPAG00000024635	SBNO1	99	83.183	ENSCSEG00000011919	sbno1	95	83.183	Cynoglossus_semilaevis
ENSPPAG00000024635	SBNO1	99	83.303	ENSCVAG00000007038	sbno1	95	83.303	Cyprinodon_variegatus
ENSPPAG00000024635	SBNO1	99	86.618	ENSDARG00000099080	sbno1	95	86.618	Danio_rerio
ENSPPAG00000024635	SBNO1	100	96.970	ENSDNOG00000017147	SBNO1	98	97.842	Dasypus_novemcinctus
ENSPPAG00000024635	SBNO1	100	84.311	ENSDORG00000015261	Sbno1	100	84.311	Dipodomys_ordii
ENSPPAG00000024635	SBNO1	92	100.000	ENSETEG00000005620	SBNO1	93	90.282	Echinops_telfairi
ENSPPAG00000024635	SBNO1	72	84.729	ENSEBUG00000013823	sbno1	85	84.729	Eptatretus_burgeri
ENSPPAG00000024635	SBNO1	54	96.199	ENSEASG00005012595	-	92	98.516	Equus_asinus_asinus
ENSPPAG00000024635	SBNO1	100	98.421	ENSECAG00000006127	SBNO1	100	98.421	Equus_caballus
ENSPPAG00000024635	SBNO1	84	97.802	ENSEEUG00000003793	SBNO1	83	97.802	Erinaceus_europaeus
ENSPPAG00000024635	SBNO1	99	86.847	ENSELUG00000002886	sbno1	95	86.847	Esox_lucius
ENSPPAG00000024635	SBNO1	99	98.420	ENSFCAG00000015331	SBNO1	99	98.420	Felis_catus
ENSPPAG00000024635	SBNO1	99	95.298	ENSFALG00000009273	SBNO1	100	91.966	Ficedula_albicollis
ENSPPAG00000024635	SBNO1	99	95.402	ENSFDAG00000014232	SBNO1	99	95.402	Fukomys_damarensis
ENSPPAG00000024635	SBNO1	99	83.483	ENSFHEG00000007360	sbno1	95	83.483	Fundulus_heteroclitus
ENSPPAG00000024635	SBNO1	96	84.587	ENSGMOG00000018229	sbno1	94	84.587	Gadus_morhua
ENSPPAG00000024635	SBNO1	87	96.954	ENSGALG00000003392	SBNO1	99	92.127	Gallus_gallus
ENSPPAG00000024635	SBNO1	99	83.662	ENSGAFG00000003960	sbno1	95	83.662	Gambusia_affinis
ENSPPAG00000024635	SBNO1	96	84.489	ENSGACG00000015633	sbno1	94	84.489	Gasterosteus_aculeatus
ENSPPAG00000024635	SBNO1	99	95.341	ENSGAGG00000001065	SBNO1	100	91.458	Gopherus_agassizii
ENSPPAG00000024635	SBNO1	100	99.779	ENSGGOG00000015000	SBNO1	100	99.779	Gorilla_gorilla
ENSPPAG00000024635	SBNO1	99	70.300	ENSHBUG00000011910	sbno1	99	70.481	Haplochromis_burtoni
ENSPPAG00000024635	SBNO1	99	99.096	ENSHGLG00000014165	-	99	99.096	Heterocephalus_glaber_female
ENSPPAG00000024635	SBNO1	93	84.980	ENSHCOG00000003246	sbno1	95	84.980	Hippocampus_comes
ENSPPAG00000024635	SBNO1	99	85.971	ENSIPUG00000015830	Sbno1	93	89.247	Ictalurus_punctatus
ENSPPAG00000024635	SBNO1	100	98.425	ENSSTOG00000023221	SBNO1	100	98.425	Ictidomys_tridecemlineatus
ENSPPAG00000024635	SBNO1	100	97.416	ENSJJAG00000001741	Sbno1	100	97.416	Jaculus_jaculus
ENSPPAG00000024635	SBNO1	99	84.364	ENSKMAG00000009696	sbno1	95	84.364	Kryptolebias_marmoratus
ENSPPAG00000024635	SBNO1	99	85.714	ENSLBEG00000007623	sbno1	95	85.714	Labrus_bergylta
ENSPPAG00000024635	SBNO1	99	80.929	ENSLACG00000017227	SBNO1	99	90.885	Latimeria_chalumnae
ENSPPAG00000024635	SBNO1	99	88.849	ENSLOCG00000005725	sbno1	95	88.849	Lepisosteus_oculatus
ENSPPAG00000024635	SBNO1	100	97.687	ENSLAFG00000002135	SBNO1	100	96.985	Loxodonta_africana
ENSPPAG00000024635	SBNO1	100	99.426	ENSMFAG00000031429	SBNO1	100	99.426	Macaca_fascicularis
ENSPPAG00000024635	SBNO1	100	99.426	ENSMMUG00000011496	SBNO1	100	99.426	Macaca_mulatta
ENSPPAG00000024635	SBNO1	99	99.819	ENSMLEG00000033260	SBNO1	99	99.819	Mandrillus_leucophaeus
ENSPPAG00000024635	SBNO1	99	84.991	ENSMAMG00000005473	sbno1	95	84.991	Mastacembelus_armatus
ENSPPAG00000024635	SBNO1	99	95.841	ENSMGAG00000003274	SBNO1	100	92.181	Meleagris_gallopavo
ENSPPAG00000024635	SBNO1	52	97.428	ENSMAUG00000004834	-	100	96.983	Mesocricetus_auratus
ENSPPAG00000024635	SBNO1	100	97.128	ENSMICG00000006573	-	100	97.128	Microcebus_murinus
ENSPPAG00000024635	SBNO1	100	97.717	ENSMOCG00000009390	Sbno1	100	97.717	Microtus_ochrogaster
ENSPPAG00000024635	SBNO1	99	83.571	ENSMMOG00000008691	sbno1	94	83.571	Mola_mola
ENSPPAG00000024635	SBNO1	99	97.283	ENSMODG00000012470	SBNO1	98	94.612	Monodelphis_domestica
ENSPPAG00000024635	SBNO1	99	83.303	ENSMALG00000001056	sbno1	99	75.245	Monopterus_albus
ENSPPAG00000024635	SBNO1	99	99.275	MGP_CAROLIEiJ_G0027749	Sbno1	100	97.285	Mus_caroli
ENSPPAG00000024635	SBNO1	99	97.557	ENSMUSG00000038095	Sbno1	100	97.285	Mus_musculus
ENSPPAG00000024635	SBNO1	99	97.414	MGP_PahariEiJ_G0024329	Sbno1	100	96.983	Mus_pahari
ENSPPAG00000024635	SBNO1	99	99.275	MGP_SPRETEiJ_G0028747	Sbno1	100	97.285	Mus_spretus
ENSPPAG00000024635	SBNO1	100	98.277	ENSMPUG00000001658	SBNO1	100	98.277	Mustela_putorius_furo
ENSPPAG00000024635	SBNO1	100	97.775	ENSMLUG00000017159	SBNO1	100	97.775	Myotis_lucifugus
ENSPPAG00000024635	SBNO1	100	97.990	ENSNGAG00000012620	Sbno1	100	97.990	Nannospalax_galili
ENSPPAG00000024635	SBNO1	99	76.138	ENSNBRG00000019189	sbno1	99	76.298	Neolamprologus_brichardi
ENSPPAG00000024635	SBNO1	100	95.652	ENSNLEG00000001502	SBNO1	100	96.594	Nomascus_leucogenys
ENSPPAG00000024635	SBNO1	60	96.774	ENSMEUG00000008768	-	93	89.873	Notamacropus_eugenii
ENSPPAG00000024635	SBNO1	99	97.292	ENSOPRG00000011054	SBNO1	100	94.050	Ochotona_princeps
ENSPPAG00000024635	SBNO1	99	99.096	ENSODEG00000009997	SBNO1	100	98.221	Octodon_degus
ENSPPAG00000024635	SBNO1	99	83.394	ENSONIG00000015348	sbno1	95	83.394	Oreochromis_niloticus
ENSPPAG00000024635	SBNO1	98	96.280	ENSOCUG00000002441	SBNO1	95	96.280	Oryctolagus_cuniculus
ENSPPAG00000024635	SBNO1	99	82.821	ENSORLG00000001593	sbno1	95	82.821	Oryzias_latipes
ENSPPAG00000024635	SBNO1	99	82.821	ENSORLG00020015216	sbno1	95	82.821	Oryzias_latipes_hni
ENSPPAG00000024635	SBNO1	99	83.002	ENSORLG00015002726	sbno1	95	83.002	Oryzias_latipes_hsok
ENSPPAG00000024635	SBNO1	99	83.273	ENSOMEG00000019313	sbno1	99	75.374	Oryzias_melastigma
ENSPPAG00000024635	SBNO1	52	94.402	ENSOGAG00000010781	-	100	94.277	Otolemur_garnettii
ENSPPAG00000024635	SBNO1	99	97.704	ENSOARG00000004404	SBNO1	99	97.704	Ovis_aries
ENSPPAG00000024635	SBNO1	99	98.420	ENSPPRG00000022092	SBNO1	99	98.420	Panthera_pardus
ENSPPAG00000024635	SBNO1	100	98.134	ENSPTIG00000017803	SBNO1	100	98.134	Panthera_tigris_altaica
ENSPPAG00000024635	SBNO1	100	99.928	ENSPTRG00000005597	SBNO1	100	99.928	Pan_troglodytes
ENSPPAG00000024635	SBNO1	100	99.528	ENSPANG00000011640	SBNO1	100	99.528	Papio_anubis
ENSPPAG00000024635	SBNO1	99	86.486	ENSPKIG00000001441	sbno1	95	86.486	Paramormyrops_kingsleyae
ENSPPAG00000024635	SBNO1	99	94.964	ENSPSIG00000009572	-	100	91.679	Pelodiscus_sinensis
ENSPPAG00000024635	SBNO1	91	91.441	ENSPSIG00000009256	-	100	87.490	Pelodiscus_sinensis
ENSPPAG00000024635	SBNO1	100	97.480	ENSPEMG00000016087	Sbno1	100	97.480	Peromyscus_maniculatus_bairdii
ENSPPAG00000024635	SBNO1	99	96.920	ENSPCIG00000010985	SBNO1	99	94.330	Phascolarctos_cinereus
ENSPPAG00000024635	SBNO1	99	83.662	ENSPFOG00000005069	sbno1	95	83.662	Poecilia_formosa
ENSPPAG00000024635	SBNO1	99	83.662	ENSPLAG00000015015	sbno1	95	83.662	Poecilia_latipinna
ENSPPAG00000024635	SBNO1	99	83.662	ENSPMEG00000021212	sbno1	95	83.662	Poecilia_mexicana
ENSPPAG00000024635	SBNO1	99	83.303	ENSPREG00000017746	sbno1	95	83.303	Poecilia_reticulata
ENSPPAG00000024635	SBNO1	100	99.210	ENSPPYG00000005084	SBNO1	100	99.210	Pongo_abelii
ENSPPAG00000024635	SBNO1	89	92.329	ENSPCAG00000008634	SBNO1	88	92.297	Procavia_capensis
ENSPPAG00000024635	SBNO1	100	98.231	ENSPCOG00000024277	SBNO1	100	98.231	Propithecus_coquereli
ENSPPAG00000024635	SBNO1	92	98.810	ENSPVAG00000015304	SBNO1	87	98.810	Pteropus_vampyrus
ENSPPAG00000024635	SBNO1	99	83.394	ENSPNYG00000004291	sbno1	95	83.394	Pundamilia_nyererei
ENSPPAG00000024635	SBNO1	99	87.590	ENSPNAG00000015622	sbno1	95	87.590	Pygocentrus_nattereri
ENSPPAG00000024635	SBNO1	99	98.030	ENSRNOG00000001064	Sbno1	99	99.275	Rattus_norvegicus
ENSPPAG00000024635	SBNO1	100	99.606	ENSRROG00000034230	SBNO1	100	99.606	Rhinopithecus_roxellana
ENSPPAG00000024635	SBNO1	97	93.051	ENSSBOG00000015422	SBNO1	100	93.601	Saimiri_boliviensis_boliviensis
ENSPPAG00000024635	SBNO1	99	86.486	ENSSFOG00015019025	sbno1	95	86.486	Scleropages_formosus
ENSPPAG00000024635	SBNO1	99	83.544	ENSSMAG00000013640	sbno1	95	83.544	Scophthalmus_maximus
ENSPPAG00000024635	SBNO1	99	84.629	ENSSDUG00000023480	sbno1	95	84.629	Seriola_dumerili
ENSPPAG00000024635	SBNO1	99	84.629	ENSSLDG00000007928	sbno1	95	84.629	Seriola_lalandi_dorsalis
ENSPPAG00000024635	SBNO1	91	97.865	ENSSARG00000002594	SBNO1	89	98.382	Sorex_araneus
ENSPPAG00000024635	SBNO1	99	94.224	ENSSPUG00000012640	SBNO1	100	91.384	Sphenodon_punctatus
ENSPPAG00000024635	SBNO1	99	82.796	ENSSPAG00000016244	sbno1	95	82.796	Stegastes_partitus
ENSPPAG00000024635	SBNO1	100	98.399	ENSSSCG00000009776	SBNO1	100	98.233	Sus_scrofa
ENSPPAG00000024635	SBNO1	99	95.479	ENSTGUG00000005380	SBNO1	100	91.894	Taeniopygia_guttata
ENSPPAG00000024635	SBNO1	99	84.448	ENSTRUG00000018490	sbno1	95	84.448	Takifugu_rubripes
ENSPPAG00000024635	SBNO1	56	70.654	ENSTNIG00000013506	sbno1	99	71.252	Tetraodon_nigroviridis
ENSPPAG00000024635	SBNO1	100	98.277	ENSUAMG00000019671	SBNO1	100	98.277	Ursus_americanus
ENSPPAG00000024635	SBNO1	100	98.277	ENSUMAG00000004002	SBNO1	100	98.277	Ursus_maritimus
ENSPPAG00000024635	SBNO1	95	93.130	ENSVPAG00000007024	SBNO1	95	93.130	Vicugna_pacos
ENSPPAG00000024635	SBNO1	100	98.134	ENSVVUG00000027807	SBNO1	100	98.134	Vulpes_vulpes
ENSPPAG00000024635	SBNO1	99	92.780	ENSXETG00000031930	SBNO1	95	92.780	Xenopus_tropicalis
ENSPPAG00000024635	SBNO1	86	85.827	ENSXCOG00000011607	sbno1	90	85.602	Xiphophorus_couchianus
ENSPPAG00000024635	SBNO1	99	83.303	ENSXMAG00000002140	sbno1	95	83.303	Xiphophorus_maculatus