EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000024919 (Gene tree)
Gene ID: 100971678
Gene Symbol: -
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 52020 bases
Position: chr16:4280767-4332786
Accession: 100971678
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000006349	MMR_HSR1	PF01926.23	1.2e-08	1	1
ENSPPAP00000006360	MMR_HSR1	PF01926.23	1.4e-08	1	1
ENSPPAP00000006358	MMR_HSR1	PF01926.23	5.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000027537	-	5518	-	ENSPPAP00000006358	912 (aa)	-	A0A2R8ZN33
ENSPPAT00000027540	-	1422	XM_003815130	ENSPPAP00000006360	473 (aa)	XP_003815178	A0A2R8ZP96
ENSPPAT00000027514	-	5594	-	ENSPPAP00000006349	431 (aa)	XP_024781777	A0A2R8ZN21

Gene Model

Click here to download ENSPPAG00000024919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000024919's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000024919	-	68	36.860	ENSPPAG00000039669	EHD2	55	36.789
ENSPPAG00000024919	-	84	33.699	ENSPPAG00000037178	EHD1	72	33.699
ENSPPAG00000024919	-	69	35.117	ENSPPAG00000042014	EHD4	56	35.197
ENSPPAG00000024919	-	81	33.429	ENSPPAG00000035288	EHD3	67	33.604

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000024919	-	100	99.768	ENSG00000185739	SRL	100	99.768	Homo_sapiens
ENSPPAG00000024919	-	99	76.047	ENSAPOG00000012432	SRL	98	74.664	Acanthochromis_polyacanthus
ENSPPAG00000024919	-	99	83.488	ENSAPOG00000018093	srl	100	82.658	Acanthochromis_polyacanthus
ENSPPAG00000024919	-	100	98.144	ENSAMEG00000010862	SRL	99	70.098	Ailuropoda_melanoleuca
ENSPPAG00000024919	-	99	75.581	ENSACIG00000015419	SRL	99	75.395	Amphilophus_citrinellus
ENSPPAG00000024919	-	99	83.256	ENSACIG00000015799	srl	100	81.898	Amphilophus_citrinellus
ENSPPAG00000024919	-	99	75.638	ENSAOCG00000017049	SRL	99	73.904	Amphiprion_ocellaris
ENSPPAG00000024919	-	99	83.721	ENSAOCG00000007574	srl	100	83.410	Amphiprion_ocellaris
ENSPPAG00000024919	-	99	71.628	ENSAPEG00000006533	SRL	99	70.110	Amphiprion_percula
ENSPPAG00000024919	-	99	83.721	ENSAPEG00000006911	srl	96	82.340	Amphiprion_percula
ENSPPAG00000024919	-	99	83.488	ENSATEG00000024315	srl	97	81.538	Anabas_testudineus
ENSPPAG00000024919	-	98	74.142	ENSATEG00000009643	SRL	52	73.407	Anabas_testudineus
ENSPPAG00000024919	-	99	90.045	ENSACAG00000016380	SRL	86	88.248	Anolis_carolinensis
ENSPPAG00000024919	-	99	73.121	ENSACLG00000024674	SRL	57	72.648	Astatotilapia_calliptera
ENSPPAG00000024919	-	99	83.256	ENSACLG00000027685	srl	97	83.032	Astatotilapia_calliptera
ENSPPAG00000024919	-	98	85.106	ENSAMXG00000018789	srl	87	83.559	Astyanax_mexicanus
ENSPPAG00000024919	-	94	78.164	ENSAMXG00000038693	SRL	100	73.510	Astyanax_mexicanus
ENSPPAG00000024919	-	99	96.744	ENSBTAG00000001078	SRL	97	72.443	Bos_taurus
ENSPPAG00000024919	-	100	99.072	ENSCJAG00000019750	SRL	100	98.520	Callithrix_jacchus
ENSPPAG00000024919	-	100	98.144	ENSCAFG00000019233	SRL	100	86.296	Canis_familiaris
ENSPPAG00000024919	-	100	98.144	ENSCAFG00020025024	SRL	98	69.423	Canis_lupus_dingo
ENSPPAG00000024919	-	99	96.744	ENSCHIG00000017927	SRL	98	67.500	Capra_hircus
ENSPPAG00000024919	-	100	98.608	ENSTSYG00000007919	SRL	100	98.608	Carlito_syrichta
ENSPPAG00000024919	-	100	97.912	ENSCPOG00000012643	SRL	100	96.406	Cavia_porcellus
ENSPPAG00000024919	-	100	92.807	ENSCCAG00000032646	SRL	100	99.208	Cebus_capucinus
ENSPPAG00000024919	-	100	99.768	ENSCATG00000032227	-	100	99.366	Cercocebus_atys
ENSPPAG00000024919	-	100	97.680	ENSCLAG00000016242	SRL	100	96.195	Chinchilla_lanigera
ENSPPAG00000024919	-	100	99.768	ENSCSAG00000009635	-	98	88.229	Chlorocebus_sabaeus
ENSPPAG00000024919	-	89	97.662	ENSCHOG00000001618	SRL	87	97.662	Choloepus_hoffmanni
ENSPPAG00000024919	-	99	93.523	ENSCPBG00000026371	SRL	96	89.293	Chrysemys_picta_bellii
ENSPPAG00000024919	-	91	62.595	ENSCING00000005231	-	93	59.620	Ciona_intestinalis
ENSPPAG00000024919	-	100	99.768	ENSCANG00000035872	SRL	100	99.768	Colobus_angolensis_palliatus
ENSPPAG00000024919	-	100	97.448	ENSCGRG00001016630	Srl	97	96.507	Cricetulus_griseus_chok1gshd
ENSPPAG00000024919	-	100	97.448	ENSCGRG00000005458	Srl	97	96.507	Cricetulus_griseus_crigri
ENSPPAG00000024919	-	99	83.256	ENSCSEG00000016151	srl	96	82.000	Cynoglossus_semilaevis
ENSPPAG00000024919	-	98	73.176	ENSCSEG00000011866	SRL	89	72.686	Cynoglossus_semilaevis
ENSPPAG00000024919	-	98	75.576	ENSCVAG00000022465	SRL	60	74.779	Cyprinodon_variegatus
ENSPPAG00000024919	-	99	84.186	ENSCVAG00000003513	srl	96	83.937	Cyprinodon_variegatus
ENSPPAG00000024919	-	99	84.884	ENSDARG00000104587	srl	98	81.917	Danio_rerio
ENSPPAG00000024919	-	88	76.562	ENSDARG00000112959	CABZ01072309.1	100	76.562	Danio_rerio
ENSPPAG00000024919	-	100	98.608	ENSDNOG00000011643	SRL	98	70.415	Dasypus_novemcinctus
ENSPPAG00000024919	-	100	96.984	ENSDORG00000014807	Srl	97	95.852	Dipodomys_ordii
ENSPPAG00000024919	-	85	65.508	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSPPAG00000024919	-	99	97.209	ENSEASG00005000942	SRL	97	70.011	Equus_asinus_asinus
ENSPPAG00000024919	-	99	97.209	ENSECAG00000024219	SRL	96	96.703	Equus_caballus
ENSPPAG00000024919	-	97	84.524	ENSELUG00000015616	srl	97	79.574	Esox_lucius
ENSPPAG00000024919	-	100	97.448	ENSFCAG00000022075	SRL	96	96.468	Felis_catus
ENSPPAG00000024919	-	99	92.075	ENSFALG00000004328	SRL	99	67.742	Ficedula_albicollis
ENSPPAG00000024919	-	100	98.376	ENSFDAG00000006199	SRL	96	97.566	Fukomys_damarensis
ENSPPAG00000024919	-	99	75.349	ENSFHEG00000011854	SRL	98	76.417	Fundulus_heteroclitus
ENSPPAG00000024919	-	99	82.791	ENSFHEG00000011239	srl	98	80.303	Fundulus_heteroclitus
ENSPPAG00000024919	-	99	82.086	ENSGMOG00000014954	srl	99	81.678	Gadus_morhua
ENSPPAG00000024919	-	99	92.075	ENSGALG00000038884	SRL	96	90.487	Gallus_gallus
ENSPPAG00000024919	-	99	83.256	ENSGAFG00000000010	srl	97	82.472	Gambusia_affinis
ENSPPAG00000024919	-	99	76.279	ENSGAFG00000016984	SRL	98	76.244	Gambusia_affinis
ENSPPAG00000024919	-	99	80.952	ENSGACG00000011332	srl	99	80.795	Gasterosteus_aculeatus
ENSPPAG00000024919	-	99	93.007	ENSGAGG00000015590	SRL	74	65.955	Gopherus_agassizii
ENSPPAG00000024919	-	100	99.768	ENSGGOG00000011312	-	100	99.366	Gorilla_gorilla
ENSPPAG00000024919	-	99	72.893	ENSHBUG00000015710	SRL	57	72.527	Haplochromis_burtoni
ENSPPAG00000024919	-	99	83.256	ENSHBUG00000007581	srl	97	83.032	Haplochromis_burtoni
ENSPPAG00000024919	-	100	98.608	ENSHGLG00000015271	SRL	100	97.040	Heterocephalus_glaber_female
ENSPPAG00000024919	-	100	98.608	ENSHGLG00100019378	SRL	100	97.040	Heterocephalus_glaber_male
ENSPPAG00000024919	-	99	72.769	ENSHCOG00000001012	SRL	51	71.242	Hippocampus_comes
ENSPPAG00000024919	-	99	83.607	ENSHCOG00000008687	srl	98	82.805	Hippocampus_comes
ENSPPAG00000024919	-	99	82.558	ENSIPUG00000012513	srl	98	79.783	Ictalurus_punctatus
ENSPPAG00000024919	-	97	70.883	ENSIPUG00000011609	SRL	89	71.990	Ictalurus_punctatus
ENSPPAG00000024919	-	100	97.912	ENSSTOG00000021151	-	97	96.507	Ictidomys_tridecemlineatus
ENSPPAG00000024919	-	100	97.448	ENSJJAG00000016400	Srl	97	96.288	Jaculus_jaculus
ENSPPAG00000024919	-	98	84.561	ENSKMAG00000014115	srl	93	84.561	Kryptolebias_marmoratus
ENSPPAG00000024919	-	99	76.512	ENSKMAG00000019537	SRL	100	76.417	Kryptolebias_marmoratus
ENSPPAG00000024919	-	99	83.023	ENSLBEG00000026643	srl	97	81.099	Labrus_bergylta
ENSPPAG00000024919	-	99	75.638	ENSLBEG00000013811	SRL	99	73.478	Labrus_bergylta
ENSPPAG00000024919	-	99	86.977	ENSLACG00000002825	SRL	100	85.430	Latimeria_chalumnae
ENSPPAG00000024919	-	99	86.047	ENSLOCG00000002644	srl	97	84.581	Lepisosteus_oculatus
ENSPPAG00000024919	-	100	97.912	ENSLAFG00000006329	SRL	98	69.289	Loxodonta_africana
ENSPPAG00000024919	-	100	99.768	ENSMFAG00000037383	SRL	100	99.768	Macaca_fascicularis
ENSPPAG00000024919	-	100	99.768	ENSMNEG00000019236	-	100	95.825	Macaca_nemestrina
ENSPPAG00000024919	-	100	91.332	ENSMLEG00000032156	SRL	100	91.332	Mandrillus_leucophaeus
ENSPPAG00000024919	-	98	74.600	ENSMAMG00000013756	SRL	53	73.904	Mastacembelus_armatus
ENSPPAG00000024919	-	99	83.721	ENSMAMG00000023322	srl	94	83.484	Mastacembelus_armatus
ENSPPAG00000024919	-	99	83.256	ENSMZEG00005004548	srl	97	83.032	Maylandia_zebra
ENSPPAG00000024919	-	99	73.121	ENSMZEG00005004010	SRL	57	72.648	Maylandia_zebra
ENSPPAG00000024919	-	99	92.075	ENSMGAG00000009342	SRL	96	91.361	Meleagris_gallopavo
ENSPPAG00000024919	-	100	97.448	ENSMICG00000032307	SRL	97	96.507	Microcebus_murinus
ENSPPAG00000024919	-	100	96.984	ENSMOCG00000008208	Srl	97	96.070	Microtus_ochrogaster
ENSPPAG00000024919	-	99	82.791	ENSMMOG00000013970	srl	98	82.579	Mola_mola
ENSPPAG00000024919	-	99	73.744	ENSMMOG00000021572	SRL	99	72.747	Mola_mola
ENSPPAG00000024919	-	99	96.744	ENSMODG00000016380	-	98	63.030	Monodelphis_domestica
ENSPPAG00000024919	-	97	76.134	ENSMALG00000000670	SRL	98	75.359	Monopterus_albus
ENSPPAG00000024919	-	99	83.023	ENSMALG00000005039	srl	99	82.222	Monopterus_albus
ENSPPAG00000024919	-	100	97.216	MGP_CAROLIEiJ_G0020400	Srl	97	96.288	Mus_caroli
ENSPPAG00000024919	-	100	97.216	ENSMUSG00000022519	Srl	97	96.288	Mus_musculus
ENSPPAG00000024919	-	100	96.984	MGP_PahariEiJ_G0016108	Srl	98	67.692	Mus_pahari
ENSPPAG00000024919	-	100	97.216	MGP_SPRETEiJ_G0021294	Srl	97	96.288	Mus_spretus
ENSPPAG00000024919	-	100	97.912	ENSMPUG00000015025	SRL	97	70.141	Mustela_putorius_furo
ENSPPAG00000024919	-	100	96.984	ENSMLUG00000030733	SRL	99	69.314	Myotis_lucifugus
ENSPPAG00000024919	-	100	96.984	ENSNGAG00000019741	Srl	97	96.288	Nannospalax_galili
ENSPPAG00000024919	-	99	83.256	ENSNBRG00000023775	srl	97	81.579	Neolamprologus_brichardi
ENSPPAG00000024919	-	99	72.789	ENSNBRG00000002422	SRL	67	65.655	Neolamprologus_brichardi
ENSPPAG00000024919	-	100	92.600	ENSNLEG00000029051	SRL	100	92.600	Nomascus_leucogenys
ENSPPAG00000024919	-	100	90.255	ENSOPRG00000000477	-	98	67.028	Ochotona_princeps
ENSPPAG00000024919	-	100	97.448	ENSODEG00000013256	SRL	97	96.725	Octodon_degus
ENSPPAG00000024919	-	99	83.488	ENSONIG00000005192	srl	99	79.487	Oreochromis_niloticus
ENSPPAG00000024919	-	100	98.144	ENSOCUG00000025140	SRL	98	71.368	Oryctolagus_cuniculus
ENSPPAG00000024919	-	99	75.352	ENSORLG00000015064	SRL	99	73.407	Oryzias_latipes
ENSPPAG00000024919	-	99	83.023	ENSORLG00000008291	srl	92	84.794	Oryzias_latipes
ENSPPAG00000024919	-	99	82.791	ENSORLG00020019784	srl	79	84.755	Oryzias_latipes_hni
ENSPPAG00000024919	-	99	75.587	ENSORLG00020018173	SRL	99	73.626	Oryzias_latipes_hni
ENSPPAG00000024919	-	99	76.000	ENSORLG00015019063	SRL	99	74.009	Oryzias_latipes_hsok
ENSPPAG00000024919	-	99	82.326	ENSORLG00015009342	srl	93	80.488	Oryzias_latipes_hsok
ENSPPAG00000024919	-	99	82.558	ENSOMEG00000010006	srl	98	82.045	Oryzias_melastigma
ENSPPAG00000024919	-	99	73.576	ENSOMEG00000005682	SRL	67	61.065	Oryzias_melastigma
ENSPPAG00000024919	-	100	96.520	ENSOGAG00000029266	SRL	99	70.833	Otolemur_garnettii
ENSPPAG00000024919	-	99	96.744	ENSOARG00000003074	SRL	72	95.186	Ovis_aries
ENSPPAG00000024919	-	100	97.680	ENSPPRG00000010274	SRL	100	97.680	Panthera_pardus
ENSPPAG00000024919	-	100	97.680	ENSPTIG00000015162	SRL	100	97.680	Panthera_tigris_altaica
ENSPPAG00000024919	-	100	100.000	ENSPTRG00000007712	SRL	100	100.000	Pan_troglodytes
ENSPPAG00000024919	-	100	99.768	ENSPANG00000013804	SRL	100	97.240	Papio_anubis
ENSPPAG00000024919	-	99	84.884	ENSPKIG00000006405	srl	98	82.251	Paramormyrops_kingsleyae
ENSPPAG00000024919	-	99	77.518	ENSPKIG00000024974	SRL	91	75.109	Paramormyrops_kingsleyae
ENSPPAG00000024919	-	99	92.308	ENSPSIG00000008586	SRL	99	59.362	Pelodiscus_sinensis
ENSPPAG00000024919	-	99	84.419	ENSPMGG00000021081	srl	97	83.407	Periophthalmus_magnuspinnatus
ENSPPAG00000024919	-	99	72.558	ENSPMGG00000023505	-	99	72.072	Periophthalmus_magnuspinnatus
ENSPPAG00000024919	-	100	97.216	ENSPEMG00000015842	Srl	97	96.288	Peromyscus_maniculatus_bairdii
ENSPPAG00000024919	-	97	67.431	ENSPMAG00000004786	srl	99	67.202	Petromyzon_marinus
ENSPPAG00000024919	-	99	96.744	ENSPCIG00000012128	SRL	99	95.575	Phascolarctos_cinereus
ENSPPAG00000024919	-	99	81.179	ENSPFOG00000011408	srl	96	78.846	Poecilia_formosa
ENSPPAG00000024919	-	99	76.047	ENSPLAG00000002932	SRL	98	74.830	Poecilia_latipinna
ENSPPAG00000024919	-	99	83.023	ENSPLAG00000008017	srl	97	82.247	Poecilia_latipinna
ENSPPAG00000024919	-	99	83.023	ENSPMEG00000006745	srl	97	82.247	Poecilia_mexicana
ENSPPAG00000024919	-	99	73.923	ENSPMEG00000005890	SRL	59	73.846	Poecilia_mexicana
ENSPPAG00000024919	-	99	83.023	ENSPREG00000007751	srl	100	81.596	Poecilia_reticulata
ENSPPAG00000024919	-	99	76.977	ENSPREG00000000315	SRL	98	75.964	Poecilia_reticulata
ENSPPAG00000024919	-	97	99.761	ENSPPYG00000007053	SRL	98	99.761	Pongo_abelii
ENSPPAG00000024919	-	99	96.512	ENSPCAG00000003378	-	88	91.165	Procavia_capensis
ENSPPAG00000024919	-	100	97.912	ENSPCOG00000023135	SRL	100	97.912	Propithecus_coquereli
ENSPPAG00000024919	-	100	97.912	ENSPVAG00000006586	SRL	98	70.229	Pteropus_vampyrus
ENSPPAG00000024919	-	99	72.686	ENSPNYG00000003423	SRL	57	72.648	Pundamilia_nyererei
ENSPPAG00000024919	-	99	83.256	ENSPNYG00000001200	srl	97	83.032	Pundamilia_nyererei
ENSPPAG00000024919	-	99	82.558	ENSPNAG00000023106	srl	95	82.022	Pygocentrus_nattereri
ENSPPAG00000024919	-	99	76.347	ENSPNAG00000007361	-	92	75.056	Pygocentrus_nattereri
ENSPPAG00000024919	-	100	96.984	ENSRNOG00000005269	Srl	98	69.881	Rattus_norvegicus
ENSPPAG00000024919	-	100	99.768	ENSRBIG00000042358	SRL	98	91.228	Rhinopithecus_bieti
ENSPPAG00000024919	-	100	99.072	ENSSBOG00000029273	SRL	100	98.520	Saimiri_boliviensis_boliviensis
ENSPPAG00000024919	-	99	96.744	ENSSHAG00000011715	-	99	61.082	Sarcophilus_harrisii
ENSPPAG00000024919	-	99	77.465	ENSSFOG00015021327	SRL	51	75.877	Scleropages_formosus
ENSPPAG00000024919	-	99	84.419	ENSSFOG00015009773	srl	99	82.213	Scleropages_formosus
ENSPPAG00000024919	-	99	73.756	ENSSMAG00000002232	SRL	50	72.527	Scophthalmus_maximus
ENSPPAG00000024919	-	99	82.791	ENSSMAG00000016274	srl	97	82.579	Scophthalmus_maximus
ENSPPAG00000024919	-	99	74.600	ENSSDUG00000009161	SRL	98	75.000	Seriola_dumerili
ENSPPAG00000024919	-	99	83.953	ENSSDUG00000010808	srl	97	83.484	Seriola_dumerili
ENSPPAG00000024919	-	99	83.953	ENSSLDG00000022024	srl	95	83.484	Seriola_lalandi_dorsalis
ENSPPAG00000024919	-	99	74.157	ENSSLDG00000014601	SRL	99	74.561	Seriola_lalandi_dorsalis
ENSPPAG00000024919	-	99	91.395	ENSSPUG00000016859	SRL	99	89.845	Sphenodon_punctatus
ENSPPAG00000024919	-	99	83.953	ENSSPAG00000019105	srl	96	82.418	Stegastes_partitus
ENSPPAG00000024919	-	99	75.814	ENSSPAG00000014254	SRL	98	74.773	Stegastes_partitus
ENSPPAG00000024919	-	99	97.209	ENSSSCG00000007949	SRL	99	96.875	Sus_scrofa
ENSPPAG00000024919	-	99	91.841	ENSTGUG00000003951	-	99	90.265	Taeniopygia_guttata
ENSPPAG00000024919	-	84	91.989	ENSTGUG00000016121	-	96	92.816	Taeniopygia_guttata
ENSPPAG00000024919	-	97	75.179	ENSTRUG00000013310	SRL	91	53.045	Takifugu_rubripes
ENSPPAG00000024919	-	99	83.256	ENSTRUG00000006005	srl	96	81.596	Takifugu_rubripes
ENSPPAG00000024919	-	99	83.256	ENSTNIG00000009739	srl	96	81.375	Tetraodon_nigroviridis
ENSPPAG00000024919	-	97	97.375	ENSTTRG00000002709	-	67	96.591	Tursiops_truncatus
ENSPPAG00000024919	-	100	97.912	ENSUAMG00000005701	SRL	98	69.164	Ursus_americanus
ENSPPAG00000024919	-	100	98.144	ENSUMAG00000002574	SRL	98	68.973	Ursus_maritimus
ENSPPAG00000024919	-	100	98.144	ENSVVUG00000016331	-	87	69.381	Vulpes_vulpes
ENSPPAG00000024919	-	99	90.698	ENSXETG00000017313	srl	100	88.717	Xenopus_tropicalis
ENSPPAG00000024919	-	99	75.814	ENSXCOG00000014584	SRL	100	74.945	Xiphophorus_couchianus
ENSPPAG00000024919	-	98	84.561	ENSXCOG00000010424	srl	97	84.561	Xiphophorus_couchianus
ENSPPAG00000024919	-	99	74.260	ENSXMAG00000027598	SRL	62	74.505	Xiphophorus_maculatus
ENSPPAG00000024919	-	99	83.488	ENSXMAG00000004625	srl	93	80.786	Xiphophorus_maculatus