EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPPAG00000025383 (Gene tree)
Gene ID
100969175
Gene Symbol
RBFOX3
Alias
-
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Pan_paniscus
Status
putative
Strand
Minus strand
Length
21076 bases
Position
chr17:78711056-78732131
Accession
100969175
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPAP00000006625Fox-1_CPF12414.82.5e-3811
ENSPPAP00000006637Fox-1_CPF12414.81.8e-3511
ENSPPAP00000006635Fox-1_CPF12414.82.3e-3511
ENSPPAP00000006625RRM_1PF00076.221.1e-1811
ENSPPAP00000006635RRM_1PF00076.221.5e-1811
ENSPPAP00000006637RRM_1PF00076.220.0002111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPAT00000028142RBFOX3-203969-ENSPPAP00000006637322 (aa)-A0A2R8ZQ49
ENSPPAT00000028116RBFOX3-2011731XM_008971525ENSPPAP00000006625286 (aa)XP_008969773A0A2R8ZNU5
ENSPPAT00000028137RBFOX3-2021059-ENSPPAP00000006635352 (aa)-A0A2R8ZNV4
Gene Model
Click here to download ENSPPAG00000025383's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000025383's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPPAG00000025383RBFOX39262.626ENSPPAG00000035653RBFOX27461.754
ENSPPAG00000025383RBFOX39578.909ENSPPAG00000036238-7079.134
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPAG00000025383RBFOX399100.000ENSG00000167281RBFOX393100.000Homo_sapiens
ENSPPAG00000025383RBFOX39981.882ENSAPOG00000021630rbfox3b6981.961Acanthochromis_polyacanthus
ENSPPAG00000025383RBFOX38868.750ENSAPOG00000015658-7167.647Acanthochromis_polyacanthus
ENSPPAG00000025383RBFOX39992.079ENSAMEG00000014170RBFOX37792.079Ailuropoda_melanoleuca
ENSPPAG00000025383RBFOX310071.242ENSACIG00000003768-7273.563Amphilophus_citrinellus
ENSPPAG00000025383RBFOX39977.003ENSACIG00000010817rbfox3b7580.702Amphilophus_citrinellus
ENSPPAG00000025383RBFOX39981.882ENSAOCG00000012358rbfox3b6981.961Amphiprion_ocellaris
ENSPPAG00000025383RBFOX38779.842ENSAOCG00000010786-6579.842Amphiprion_ocellaris
ENSPPAG00000025383RBFOX38679.435ENSAPEG00000019081rbfox3b6580.889Amphiprion_percula
ENSPPAG00000025383RBFOX39068.905ENSAPEG00000015891-6471.200Amphiprion_percula
ENSPPAG00000025383RBFOX39971.609ENSATEG00000019945rbfox3b8271.579Anabas_testudineus
ENSPPAG00000025383RBFOX39477.455ENSATEG00000023101-7876.953Anabas_testudineus
ENSPPAG00000025383RBFOX39989.895ENSACAG00000016093RBFOX37190.551Anolis_carolinensis
ENSPPAG00000025383RBFOX39998.246ENSANAG00000023457RBFOX39198.246Aotus_nancymaae
ENSPPAG00000025383RBFOX39981.185ENSACLG00000020011rbfox3b8181.569Astatotilapia_calliptera
ENSPPAG00000025383RBFOX39580.797ENSACLG00000025552-6980.392Astatotilapia_calliptera
ENSPPAG00000025383RBFOX38881.712ENSAMXG00000037246rbfox3a7681.712Astyanax_mexicanus
ENSPPAG00000025383RBFOX39976.736ENSAMXG00000042841rbfox3b7276.471Astyanax_mexicanus
ENSPPAG00000025383RBFOX310097.203ENSBTAG00000006280RBFOX39297.351Bos_taurus
ENSPPAG00000025383RBFOX39498.494ENSCJAG00000009563RBFOX39398.494Callithrix_jacchus
ENSPPAG00000025383RBFOX37499.052ENSCAFG00000005547RBFOX37699.052Canis_familiaris
ENSPPAG00000025383RBFOX39498.795ENSCAFG00020008126RBFOX38998.498Canis_lupus_dingo
ENSPPAG00000025383RBFOX39497.020ENSCHIG00000009124RBFOX38996.997Capra_hircus
ENSPPAG00000025383RBFOX39499.099ENSTSYG00000029617RBFOX39399.099Carlito_syrichta
ENSPPAG00000025383RBFOX35996.450ENSCAPG00000010217RBFOX310096.450Cavia_aperea
ENSPPAG00000025383RBFOX39496.726ENSCPOG00000021703RBFOX39396.726Cavia_porcellus
ENSPPAG00000025383RBFOX39998.246ENSCCAG00000028450RBFOX39298.344Cebus_capucinus
ENSPPAG00000025383RBFOX39999.649ENSCATG00000018349RBFOX39199.649Cercocebus_atys
ENSPPAG00000025383RBFOX39498.020ENSCLAG00000006449RBFOX39397.904Chinchilla_lanigera
ENSPPAG00000025383RBFOX39999.649ENSCSAG00000002355RBFOX39199.649Chlorocebus_sabaeus
ENSPPAG00000025383RBFOX38890.873ENSCPBG00000010904RBFOX38190.873Chrysemys_picta_bellii
ENSPPAG00000025383RBFOX39999.649ENSCANG00000043120RBFOX39199.649Colobus_angolensis_palliatus
ENSPPAG00000025383RBFOX39496.382ENSCGRG00001019476Rbfox39296.382Cricetulus_griseus_chok1gshd
ENSPPAG00000025383RBFOX39496.382ENSCGRG00000003268Rbfox39296.382Cricetulus_griseus_crigri
ENSPPAG00000025383RBFOX39577.536ENSCSEG00000015567RBFOX36580.753Cynoglossus_semilaevis
ENSPPAG00000025383RBFOX39767.972ENSCSEG00000020606RBFOX37170.954Cynoglossus_semilaevis
ENSPPAG00000025383RBFOX39981.882ENSCVAG00000006882rbfox3b6981.961Cyprinodon_variegatus
ENSPPAG00000025383RBFOX39972.028ENSDARG00000074310rbfox3b8573.034Danio_rerio
ENSPPAG00000025383RBFOX38880.545ENSDARG00000010083rbfox3a8079.468Danio_rerio
ENSPPAG00000025383RBFOX37484.291ENSDNOG00000039391RBFOX37485.357Dasypus_novemcinctus
ENSPPAG00000025383RBFOX39084.591ENSDORG00000005352Rbfox38084.281Dipodomys_ordii
ENSPPAG00000025383RBFOX39474.815ENSEBUG00000002129RBFOX37475.591Eptatretus_burgeri
ENSPPAG00000025383RBFOX39361.818ENSEBUG00000013559RBFOX37163.281Eptatretus_burgeri
ENSPPAG00000025383RBFOX39997.561ENSEASG00005005059RBFOX39197.561Equus_asinus_asinus
ENSPPAG00000025383RBFOX39997.213ENSECAG00000023811RBFOX39197.213Equus_caballus
ENSPPAG00000025383RBFOX38093.939ENSEEUG00000013974RBFOX38079.933Erinaceus_europaeus
ENSPPAG00000025383RBFOX39981.250ENSELUG00000017963rbfox3b7976.494Esox_lucius
ENSPPAG00000025383RBFOX39997.544ENSFCAG00000002555RBFOX39197.544Felis_catus
ENSPPAG00000025383RBFOX38871.831ENSFALG00000012288RBFOX37071.831Ficedula_albicollis
ENSPPAG00000025383RBFOX39690.354ENSFDAG00000007489RBFOX39291.964Fukomys_damarensis
ENSPPAG00000025383RBFOX39971.429ENSFHEG00000008550rbfox3b7970.196Fundulus_heteroclitus
ENSPPAG00000025383RBFOX39961.012ENSGMOG00000019304-8165.314Gadus_morhua
ENSPPAG00000025383RBFOX38893.651ENSGALG00000032889RBFOX37193.651Gallus_gallus
ENSPPAG00000025383RBFOX39779.928ENSGAFG00000005025rbfox3b7380.784Gambusia_affinis
ENSPPAG00000025383RBFOX39070.062ENSGACG00000002138-8069.737Gasterosteus_aculeatus
ENSPPAG00000025383RBFOX38890.476ENSGAGG00000020025RBFOX38190.476Gopherus_agassizii
ENSPPAG00000025383RBFOX399100.000ENSGGOG00000012546RBFOX391100.000Gorilla_gorilla
ENSPPAG00000025383RBFOX39580.435ENSHBUG00000023098-7380.392Haplochromis_burtoni
ENSPPAG00000025383RBFOX39981.185ENSHBUG00000018099rbfox3b6981.569Haplochromis_burtoni
ENSPPAG00000025383RBFOX39793.891ENSHGLG00000008679RBFOX39396.154Heterocephalus_glaber_female
ENSPPAG00000025383RBFOX38893.310ENSHGLG00100014739RBFOX38193.004Heterocephalus_glaber_male
ENSPPAG00000025383RBFOX38881.746ENSHCOG00000007444RBFOX36582.000Hippocampus_comes
ENSPPAG00000025383RBFOX38377.178ENSHCOG00000001863RBFOX37177.333Hippocampus_comes
ENSPPAG00000025383RBFOX38880.156ENSIPUG00000012010rbfox3a7680.156Ictalurus_punctatus
ENSPPAG00000025383RBFOX39966.456ENSIPUG00000021966rbfox3b8875.949Ictalurus_punctatus
ENSPPAG00000025383RBFOX38596.053ENSSTOG00000026817RBFOX37996.053Ictidomys_tridecemlineatus
ENSPPAG00000025383RBFOX39498.013ENSJJAG00000014167Rbfox39397.898Jaculus_jaculus
ENSPPAG00000025383RBFOX39981.882ENSKMAG00000006726rbfox3b6981.961Kryptolebias_marmoratus
ENSPPAG00000025383RBFOX39482.117ENSLBEG00000022508-7675.092Labrus_bergylta
ENSPPAG00000025383RBFOX39981.533ENSLBEG00000004030rbfox3b7580.263Labrus_bergylta
ENSPPAG00000025383RBFOX38876.071ENSLACG00000018409-7176.071Latimeria_chalumnae
ENSPPAG00000025383RBFOX35264.286ENSLACG00000000021-8660.355Latimeria_chalumnae
ENSPPAG00000025383RBFOX38886.275ENSLOCG00000012267rbfox3a7786.275Lepisosteus_oculatus
ENSPPAG00000025383RBFOX39496.407ENSLAFG00000016623RBFOX38996.407Loxodonta_africana
ENSPPAG00000025383RBFOX39499.699ENSMFAG00000002247RBFOX39399.699Macaca_fascicularis
ENSPPAG00000025383RBFOX39999.649ENSMMUG00000023028RBFOX310098.580Macaca_mulatta
ENSPPAG00000025383RBFOX39999.649ENSMNEG00000041147RBFOX39199.649Macaca_nemestrina
ENSPPAG00000025383RBFOX39999.649ENSMLEG00000025686RBFOX39199.649Mandrillus_leucophaeus
ENSPPAG00000025383RBFOX39475.182ENSMAMG00000020600-7474.806Mastacembelus_armatus
ENSPPAG00000025383RBFOX39976.491ENSMAMG00000019810rbfox3b7480.000Mastacembelus_armatus
ENSPPAG00000025383RBFOX39981.185ENSMZEG00005000781rbfox3b6981.569Maylandia_zebra
ENSPPAG00000025383RBFOX310060.502ENSMZEG00005003055-5989.630Maylandia_zebra
ENSPPAG00000025383RBFOX36792.188ENSMGAG00000005600RBFOX37392.188Meleagris_gallopavo
ENSPPAG00000025383RBFOX39495.724ENSMAUG00000013543Rbfox39295.724Mesocricetus_auratus
ENSPPAG00000025383RBFOX39996.842ENSMICG00000014898RBFOX39197.020Microcebus_murinus
ENSPPAG00000025383RBFOX39496.370ENSMOCG00000015373Rbfox39296.370Microtus_ochrogaster
ENSPPAG00000025383RBFOX39979.452ENSMMOG00000020193rbfox3b7081.423Mola_mola
ENSPPAG00000025383RBFOX38893.254ENSMODG00000002089RBFOX37093.254Monodelphis_domestica
ENSPPAG00000025383RBFOX39980.836ENSMALG00000020407rbfox3b6980.784Monopterus_albus
ENSPPAG00000025383RBFOX39581.522ENSMALG00000018270-7377.826Monopterus_albus
ENSPPAG00000025383RBFOX39996.853MGP_CAROLIEiJ_G0017487Rbfox310097.633Mus_caroli
ENSPPAG00000025383RBFOX39996.503ENSMUSG00000025576Rbfox310097.241Mus_musculus
ENSPPAG00000025383RBFOX39996.864MGP_PahariEiJ_G0018614Rbfox310097.931Mus_pahari
ENSPPAG00000025383RBFOX39996.853MGP_SPRETEiJ_G0018331Rbfox310097.633Mus_spretus
ENSPPAG00000025383RBFOX39986.957ENSMPUG00000012319RBFOX38486.957Mustela_putorius_furo
ENSPPAG00000025383RBFOX39497.030ENSNGAG00000018006Rbfox39397.006Nannospalax_galili
ENSPPAG00000025383RBFOX39980.139ENSNBRG00000010102rbfox3b6980.392Neolamprologus_brichardi
ENSPPAG00000025383RBFOX38878.571ENSNBRG00000022885-6978.481Neolamprologus_brichardi
ENSPPAG00000025383RBFOX36791.960ENSNLEG00000000153-7291.960Nomascus_leucogenys
ENSPPAG00000025383RBFOX39064.669ENSMEUG00000004218-7370.611Notamacropus_eugenii
ENSPPAG00000025383RBFOX36296.629ENSOPRG00000016279-5196.629Ochotona_princeps
ENSPPAG00000025383RBFOX39997.902ENSODEG00000009433RBFOX39298.020Octodon_degus
ENSPPAG00000025383RBFOX39981.882ENSONIG00000009549rbfox3b8075.000Oreochromis_niloticus
ENSPPAG00000025383RBFOX39581.522ENSONIG00000007282-7481.176Oreochromis_niloticus
ENSPPAG00000025383RBFOX36881.933ENSOCUG00000014217RBFOX36581.590Oryctolagus_cuniculus
ENSPPAG00000025383RBFOX39981.597ENSORLG00000000905rbfox3b5581.176Oryzias_latipes
ENSPPAG00000025383RBFOX39981.597ENSORLG00020018030rbfox3b6981.176Oryzias_latipes_hni
ENSPPAG00000025383RBFOX39981.250ENSORLG00015009200rbfox3b7476.923Oryzias_latipes_hsok
ENSPPAG00000025383RBFOX38475.969ENSOMEG00000014677rbfox3b7676.995Oryzias_melastigma
ENSPPAG00000025383RBFOX39997.193ENSOGAG00000029595RBFOX37697.193Otolemur_garnettii
ENSPPAG00000025383RBFOX38762.724ENSOARG00000002908RBFOX37165.201Ovis_aries
ENSPPAG00000025383RBFOX39495.482ENSPPRG00000007819RBFOX39395.482Panthera_pardus
ENSPPAG00000025383RBFOX399100.000ENSPTRG00000009727RBFOX391100.000Pan_troglodytes
ENSPPAG00000025383RBFOX39999.649ENSPANG00000019837RBFOX39199.649Papio_anubis
ENSPPAG00000025383RBFOX39970.280ENSPKIG00000022633-6969.565Paramormyrops_kingsleyae
ENSPPAG00000025383RBFOX39584.364ENSPKIG00000010299rbfox3a7384.314Paramormyrops_kingsleyae
ENSPPAG00000025383RBFOX39382.090ENSPMGG00000008000rbfox3b7781.818Periophthalmus_magnuspinnatus
ENSPPAG00000025383RBFOX39496.700ENSPEMG00000010500Rbfox39296.700Peromyscus_maniculatus_bairdii
ENSPPAG00000025383RBFOX35157.672ENSPMAG00000008689rbfox3b6976.596Petromyzon_marinus
ENSPPAG00000025383RBFOX39094.025ENSPCIG00000005766RBFOX38994.025Phascolarctos_cinereus
ENSPPAG00000025383RBFOX39981.882ENSPFOG00000018294rbfox3b7968.978Poecilia_formosa
ENSPPAG00000025383RBFOX37579.263ENSPLAG00000000481rbfox3b5785.549Poecilia_latipinna
ENSPPAG00000025383RBFOX39971.429ENSPMEG00000022997rbfox3b7970.196Poecilia_mexicana
ENSPPAG00000025383RBFOX39982.292ENSPREG00000012886rbfox3b7382.353Poecilia_reticulata
ENSPPAG00000025383RBFOX39993.684ENSPPYG00000008704RBFOX38493.684Pongo_abelii
ENSPPAG00000025383RBFOX38693.421ENSPCAG00000001401RBFOX38593.421Procavia_capensis
ENSPPAG00000025383RBFOX39497.892ENSPCOG00000012689RBFOX39397.892Propithecus_coquereli
ENSPPAG00000025383RBFOX38587.919ENSPVAG00000015243RBFOX38387.919Pteropus_vampyrus
ENSPPAG00000025383RBFOX38380.579ENSPNYG00000010414rbfox3b6680.444Pundamilia_nyererei
ENSPPAG00000025383RBFOX38879.447ENSPNYG00000009079-6579.832Pundamilia_nyererei
ENSPPAG00000025383RBFOX39962.807ENSPNAG00000018173rbfox3b6572.449Pygocentrus_nattereri
ENSPPAG00000025383RBFOX38881.323ENSPNAG00000002889rbfox3a6881.323Pygocentrus_nattereri
ENSPPAG00000025383RBFOX39996.864ENSRNOG00000003386Rbfox39196.864Rattus_norvegicus
ENSPPAG00000025383RBFOX39999.649ENSRBIG00000040449RBFOX38099.649Rhinopithecus_bieti
ENSPPAG00000025383RBFOX39999.649ENSRROG00000000766RBFOX39199.649Rhinopithecus_roxellana
ENSPPAG00000025383RBFOX39998.246ENSSBOG00000031591RBFOX39398.494Saimiri_boliviensis_boliviensis
ENSPPAG00000025383RBFOX39483.444ENSSHAG00000016076RBFOX38776.792Sarcophilus_harrisii
ENSPPAG00000025383RBFOX38771.429ENSSFOG00015004716RBFOX37271.654Scleropages_formosus
ENSPPAG00000025383RBFOX38884.706ENSSFOG00015023260rbfox3a6984.706Scleropages_formosus
ENSPPAG00000025383RBFOX39976.974ENSSMAG00000012618rbfox3b6177.491Scophthalmus_maximus
ENSPPAG00000025383RBFOX39979.655ENSSMAG00000019052-8179.688Scophthalmus_maximus
ENSPPAG00000025383RBFOX38780.237ENSSDUG00000015801-6980.237Seriola_dumerili
ENSPPAG00000025383RBFOX39971.429ENSSDUG00000023183rbfox3b7970.196Seriola_dumerili
ENSPPAG00000025383RBFOX39574.545ENSSLDG00000016098-6879.339Seriola_lalandi_dorsalis
ENSPPAG00000025383RBFOX39981.882ENSSLDG00000000149rbfox3b6981.961Seriola_lalandi_dorsalis
ENSPPAG00000025383RBFOX38891.339ENSSPUG00000011733RBFOX38191.339Sphenodon_punctatus
ENSPPAG00000025383RBFOX39574.545ENSSPAG00000004898-7573.725Stegastes_partitus
ENSPPAG00000025383RBFOX39971.429ENSSPAG00000017571rbfox3b6373.684Stegastes_partitus
ENSPPAG00000025383RBFOX38497.107ENSSSCG00000039498RBFOX38896.897Sus_scrofa
ENSPPAG00000025383RBFOX39779.783ENSTRUG00000004894rbfox3b7279.923Takifugu_rubripes
ENSPPAG00000025383RBFOX39972.188ENSTNIG00000011278rbfox3b7172.474Tetraodon_nigroviridis
ENSPPAG00000025383RBFOX39369.578ENSTBEG00000004296-8969.578Tupaia_belangeri
ENSPPAG00000025383RBFOX38590.940ENSTTRG00000003676RBFOX38991.483Tursiops_truncatus
ENSPPAG00000025383RBFOX39997.895ENSUAMG00000004668RBFOX39197.895Ursus_americanus
ENSPPAG00000025383RBFOX39998.596ENSVVUG00000017864RBFOX39198.596Vulpes_vulpes
ENSPPAG00000025383RBFOX39364.726ENSXETG00000020236rbfox37064.260Xenopus_tropicalis
ENSPPAG00000025383RBFOX39980.556ENSXCOG00000018262rbfox3b7779.825Xiphophorus_couchianus
ENSPPAG00000025383RBFOX39981.882ENSXMAG00000012939rbfox3b6981.961Xiphophorus_maculatus

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