EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPPAG00000025861 (Gene tree)
Gene ID
100968628
Gene Symbol
CSDE1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Pan_paniscus
Status
putative
Strand
Plus strand
Length
41057 bases
Position
chr1:122849903-122890959
Accession
100968628
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPAP00000007078CSDPF00313.221e-8415
ENSPPAP00000007078CSDPF00313.221e-8425
ENSPPAP00000007078CSDPF00313.221e-8435
ENSPPAP00000007078CSDPF00313.221e-8445
ENSPPAP00000007078CSDPF00313.221e-8455
ENSPPAP00000007089CSDPF00313.221.4e-8415
ENSPPAP00000007089CSDPF00313.221.4e-8425
ENSPPAP00000007089CSDPF00313.221.4e-8435
ENSPPAP00000007089CSDPF00313.221.4e-8445
ENSPPAP00000007089CSDPF00313.221.4e-8455
ENSPPAP00000007076CSDPF00313.222e-8415
ENSPPAP00000007076CSDPF00313.222e-8425
ENSPPAP00000007076CSDPF00313.222e-8435
ENSPPAP00000007076CSDPF00313.222e-8445
ENSPPAP00000007076CSDPF00313.222e-8455
ENSPPAP00000007074CSDPF00313.222.4e-8415
ENSPPAP00000007074CSDPF00313.222.4e-8425
ENSPPAP00000007074CSDPF00313.222.4e-8435
ENSPPAP00000007074CSDPF00313.222.4e-8445
ENSPPAP00000007074CSDPF00313.222.4e-8455
ENSPPAP00000007109CSDPF00313.222.3e-3712
ENSPPAP00000007109CSDPF00313.222.3e-3722
ENSPPAP00000007097CSDPF00313.223.8e-3212
ENSPPAP00000007097CSDPF00313.223.8e-3222
ENSPPAP00000007090CSDPF00313.223e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPAT00000029167CSDE1-2071269-ENSPPAP00000007109422 (aa)-A0A2R8ZW38
ENSPPAT00000029130CSDE1-2042358-ENSPPAP00000007089785 (aa)-A0A2R8ZW19
ENSPPAT00000029132CSDE1-205447-ENSPPAP00000007090148 (aa)-A0A2R8ZQ78
ENSPPAT00000029098CSDE1-2014308XM_003805637ENSPPAP00000007074844 (aa)XP_003805685A0A2R8ZW03
ENSPPAT00000029145CSDE1-206912-ENSPPAP00000007097303 (aa)-A0A2R8ZRE2
ENSPPAT00000029102CSDE1-2033942XM_003805636ENSPPAP00000007078767 (aa)XP_003805684A0A2R8ZT70
ENSPPAT00000029100CSDE1-2024215XM_003805638ENSPPAP00000007076813 (aa)XP_003805686A0A2R8ZQ63
Gene Model
Click here to download ENSPPAG00000025861's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000025861's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPAG00000025861CSDE1100100.000ENSG00000009307CSDE1100100.000Homo_sapiens
ENSPPAG00000025861CSDE110077.662ENSAPOG00000015538csde110077.662Acanthochromis_polyacanthus
ENSPPAG00000025861CSDE110098.175ENSAMEG00000017129CSDE110097.789Ailuropoda_melanoleuca
ENSPPAG00000025861CSDE19080.383ENSACIG00000015175csde19980.383Amphilophus_citrinellus
ENSPPAG00000025861CSDE110077.792ENSAOCG00000011510csde110077.792Amphiprion_ocellaris
ENSPPAG00000025861CSDE110077.792ENSAPEG00000007194csde110077.792Amphiprion_percula
ENSPPAG00000025861CSDE110077.403ENSATEG00000003864csde110077.403Anabas_testudineus
ENSPPAG00000025861CSDE110091.917ENSAPLG00000008797CSDE110091.917Anas_platyrhynchos
ENSPPAG00000025861CSDE110088.346ENSACAG00000003120CSDE110092.231Anolis_carolinensis
ENSPPAG00000025861CSDE110099.739ENSANAG00000024665CSDE110099.670Aotus_nancymaae
ENSPPAG00000025861CSDE19971.661ENSANAG00000028396-9471.661Aotus_nancymaae
ENSPPAG00000025861CSDE110077.373ENSACLG00000013296csde110077.373Astatotilapia_calliptera
ENSPPAG00000025861CSDE110077.173ENSAMXG00000007436csde110077.173Astyanax_mexicanus
ENSPPAG00000025861CSDE110098.827ENSBTAG00000000678CSDE110098.827Bos_taurus
ENSPPAG00000025861CSDE110099.763ENSCJAG00000012565CSDE110099.763Callithrix_jacchus
ENSPPAG00000025861CSDE19899.335ENSCAFG00000009618CSDE110099.248Canis_familiaris
ENSPPAG00000025861CSDE110099.348ENSCAFG00020000481CSDE110099.348Canis_lupus_dingo
ENSPPAG00000025861CSDE110098.827ENSCHIG00000017250CSDE110098.827Capra_hircus
ENSPPAG00000025861CSDE110098.566ENSTSYG00000003747CSDE110098.864Carlito_syrichta
ENSPPAG00000025861CSDE19591.228ENSCAPG00000015128CSDE110091.228Cavia_aperea
ENSPPAG00000025861CSDE19795.588ENSCPOG00000040388CSDE110093.609Cavia_porcellus
ENSPPAG00000025861CSDE110099.763ENSCCAG00000036794CSDE110099.763Cebus_capucinus
ENSPPAG00000025861CSDE19577.228ENSCCAG00000033677-9976.485Cebus_capucinus
ENSPPAG00000025861CSDE19674.610ENSCCAG00000030878-9174.610Cebus_capucinus
ENSPPAG00000025861CSDE1100100.000ENSCATG00000036962CSDE1100100.000Cercocebus_atys
ENSPPAG00000025861CSDE110098.696ENSCLAG00000006618CSDE110098.747Chinchilla_lanigera
ENSPPAG00000025861CSDE1100100.000ENSCSAG00000001658CSDE1100100.000Chlorocebus_sabaeus
ENSPPAG00000025861CSDE110099.387ENSCHOG00000000918CSDE19199.387Choloepus_hoffmanni
ENSPPAG00000025861CSDE110092.308ENSCPBG00000016547CSDE110092.607Chrysemys_picta_bellii
ENSPPAG00000025861CSDE19741.943ENSCING00000014465-9643.032Ciona_intestinalis
ENSPPAG00000025861CSDE19642.092ENSCSAVG00000008100-9842.503Ciona_savignyi
ENSPPAG00000025861CSDE1100100.000ENSCANG00000035096CSDE110099.882Colobus_angolensis_palliatus
ENSPPAG00000025861CSDE19994.150ENSCANG00000031069-10094.150Colobus_angolensis_palliatus
ENSPPAG00000025861CSDE110098.566ENSCGRG00001016833-10098.622Cricetulus_griseus_chok1gshd
ENSPPAG00000025861CSDE110081.356ENSCGRG00001014011-10081.356Cricetulus_griseus_chok1gshd
ENSPPAG00000025861CSDE19698.441ENSCGRG00000002225-10098.441Cricetulus_griseus_crigri
ENSPPAG00000025861CSDE110084.783ENSCGRG00000005831-10084.783Cricetulus_griseus_crigri
ENSPPAG00000025861CSDE110077.243ENSCSEG00000002620csde110077.243Cynoglossus_semilaevis
ENSPPAG00000025861CSDE110076.753ENSCVAG00000001344csde110076.753Cyprinodon_variegatus
ENSPPAG00000025861CSDE110075.344ENSDARG00000074758csde19984.343Danio_rerio
ENSPPAG00000025861CSDE110098.568ENSDNOG00000010287-9498.187Dasypus_novemcinctus
ENSPPAG00000025861CSDE17378.261ENSDNOG00000034464-10073.043Dasypus_novemcinctus
ENSPPAG00000025861CSDE19998.353ENSDORG00000011609Csde110098.353Dipodomys_ordii
ENSPPAG00000025861CSDE19747.541FBgn0263352Unr8148.193Drosophila_melanogaster
ENSPPAG00000025861CSDE18890.637ENSETEG00000006280-10087.342Echinops_telfairi
ENSPPAG00000025861CSDE19467.089ENSETEG00000007109-9968.543Echinops_telfairi
ENSPPAG00000025861CSDE19398.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSPPAG00000025861CSDE19977.285ENSETEG00000013678-9977.285Echinops_telfairi
ENSPPAG00000025861CSDE19954.433ENSEBUG00000008647csde19954.286Eptatretus_burgeri
ENSPPAG00000025861CSDE110099.087ENSEASG00005006284CSDE110099.123Equus_asinus_asinus
ENSPPAG00000025861CSDE110099.087ENSECAG00000020885CSDE110099.123Equus_caballus
ENSPPAG00000025861CSDE19399.476ENSEEUG00000006286CSDE17499.476Erinaceus_europaeus
ENSPPAG00000025861CSDE110075.809ENSELUG00000015507csde110075.809Esox_lucius
ENSPPAG00000025861CSDE110099.348ENSFCAG00000029266CSDE110099.348Felis_catus
ENSPPAG00000025861CSDE110088.095ENSFALG00000003407CSDE110091.980Ficedula_albicollis
ENSPPAG00000025861CSDE19999.251ENSFDAG00000007882CSDE110099.251Fukomys_damarensis
ENSPPAG00000025861CSDE19877.188ENSFHEG00000010799csde110076.779Fundulus_heteroclitus
ENSPPAG00000025861CSDE19974.279ENSGMOG00000012731csde110076.846Gadus_morhua
ENSPPAG00000025861CSDE19888.235ENSGALG00000002139CSDE19892.199Gallus_gallus
ENSPPAG00000025861CSDE19578.041ENSGAFG00000005241csde19576.372Gambusia_affinis
ENSPPAG00000025861CSDE19975.063ENSGACG00000004544csde110077.625Gasterosteus_aculeatus
ENSPPAG00000025861CSDE110091.917ENSGAGG00000017685CSDE110092.231Gopherus_agassizii
ENSPPAG00000025861CSDE1100100.000ENSGGOG00000002164CSDE1100100.000Gorilla_gorilla
ENSPPAG00000025861CSDE110077.373ENSHBUG00000020315csde110077.373Haplochromis_burtoni
ENSPPAG00000025861CSDE110080.429ENSHGLG00000019549-10082.581Heterocephalus_glaber_female
ENSPPAG00000025861CSDE19976.412ENSHGLG00000000650-9980.301Heterocephalus_glaber_female
ENSPPAG00000025861CSDE19689.978ENSHGLG00000010039-10089.978Heterocephalus_glaber_female
ENSPPAG00000025861CSDE19989.521ENSHGLG00000008555-10089.521Heterocephalus_glaber_female
ENSPPAG00000025861CSDE110089.179ENSHGLG00000009620-10089.850Heterocephalus_glaber_female
ENSPPAG00000025861CSDE19985.545ENSHGLG00000007471-9885.545Heterocephalus_glaber_female
ENSPPAG00000025861CSDE110089.309ENSHGLG00000003829-10089.309Heterocephalus_glaber_female
ENSPPAG00000025861CSDE19384.100ENSHGLG00100004195-10084.100Heterocephalus_glaber_male
ENSPPAG00000025861CSDE110084.485ENSHGLG00100012072-10084.485Heterocephalus_glaber_male
ENSPPAG00000025861CSDE19982.917ENSHGLG00100007287-9882.917Heterocephalus_glaber_male
ENSPPAG00000025861CSDE19980.851ENSHGLG00100002245-9984.606Heterocephalus_glaber_male
ENSPPAG00000025861CSDE110080.469ENSHGLG00100001846-10080.469Heterocephalus_glaber_male
ENSPPAG00000025861CSDE110099.218ENSHGLG00100019438-10099.248Heterocephalus_glaber_male
ENSPPAG00000025861CSDE19682.183ENSHGLG00100004833-10082.183Heterocephalus_glaber_male
ENSPPAG00000025861CSDE19689.755ENSHGLG00100006910-10089.755Heterocephalus_glaber_male
ENSPPAG00000025861CSDE110076.333ENSHCOG00000004158csde110076.333Hippocampus_comes
ENSPPAG00000025861CSDE110076.913ENSIPUG00000000355csde110076.913Ictalurus_punctatus
ENSPPAG00000025861CSDE19281.290ENSSTOG00000032722-9493.007Ictidomys_tridecemlineatus
ENSPPAG00000025861CSDE110080.435ENSSTOG00000030994-10080.435Ictidomys_tridecemlineatus
ENSPPAG00000025861CSDE19998.503ENSJJAG00000019571Csde110098.503Jaculus_jaculus
ENSPPAG00000025861CSDE110074.222ENSKMAG00000005685csde110076.267Kryptolebias_marmoratus
ENSPPAG00000025861CSDE110077.662ENSLBEG00000014770csde110077.662Labrus_bergylta
ENSPPAG00000025861CSDE19483.448ENSLACG00000018452CSDE19679.294Latimeria_chalumnae
ENSPPAG00000025861CSDE110077.934ENSLOCG00000010413csde19680.074Lepisosteus_oculatus
ENSPPAG00000025861CSDE110097.784ENSLAFG00000007150CSDE19697.784Loxodonta_africana
ENSPPAG00000025861CSDE1100100.000ENSMFAG00000003674CSDE1100100.000Macaca_fascicularis
ENSPPAG00000025861CSDE1100100.000ENSMMUG00000001974CSDE1100100.000Macaca_mulatta
ENSPPAG00000025861CSDE1100100.000ENSMNEG00000045247CSDE1100100.000Macaca_nemestrina
ENSPPAG00000025861CSDE110099.763ENSMLEG00000038673CSDE110099.763Mandrillus_leucophaeus
ENSPPAG00000025861CSDE110078.312ENSMAMG00000008821csde110078.312Mastacembelus_armatus
ENSPPAG00000025861CSDE110077.373ENSMZEG00005021675csde110077.373Maylandia_zebra
ENSPPAG00000025861CSDE110091.667ENSMGAG00000016381CSDE110091.667Meleagris_gallopavo
ENSPPAG00000025861CSDE19998.802ENSMAUG00000014031Csde110098.802Mesocricetus_auratus
ENSPPAG00000025861CSDE110098.566ENSMICG00000002050CSDE110098.401Microcebus_murinus
ENSPPAG00000025861CSDE110098.566ENSMOCG00000018960Csde110098.622Microtus_ochrogaster
ENSPPAG00000025861CSDE110077.662ENSMMOG00000015075csde110077.662Mola_mola
ENSPPAG00000025861CSDE110095.189ENSMODG00000004685CSDE110096.115Monodelphis_domestica
ENSPPAG00000025861CSDE110077.792ENSMALG00000007132csde110077.792Monopterus_albus
ENSPPAG00000025861CSDE110098.305MGP_CAROLIEiJ_G0025444Csde110098.675Mus_caroli
ENSPPAG00000025861CSDE110098.435ENSMUSG00000068823Csde110098.675Mus_musculus
ENSPPAG00000025861CSDE110098.696MGP_PahariEiJ_G0026888Csde110098.747Mus_pahari
ENSPPAG00000025861CSDE110098.696MGP_SPRETEiJ_G0026394Csde110098.747Mus_spretus
ENSPPAG00000025861CSDE19895.402ENSMPUG00000005753CSDE19999.361Mustela_putorius_furo
ENSPPAG00000025861CSDE110098.566ENSMLUG00000005681CSDE110098.155Myotis_lucifugus
ENSPPAG00000025861CSDE18388.889ENSNGAG00000012599-10071.269Nannospalax_galili
ENSPPAG00000025861CSDE19998.952ENSNGAG00000021929Csde110098.952Nannospalax_galili
ENSPPAG00000025861CSDE110077.373ENSNBRG00000020808csde110077.373Neolamprologus_brichardi
ENSPPAG00000025861CSDE110099.882ENSNLEG00000004842CSDE110099.882Nomascus_leucogenys
ENSPPAG00000025861CSDE19891.622ENSMEUG00000002677CSDE19696.117Notamacropus_eugenii
ENSPPAG00000025861CSDE19896.644ENSOPRG00000005002CSDE18894.246Ochotona_princeps
ENSPPAG00000025861CSDE19998.952ENSODEG00000007383-10098.952Octodon_degus
ENSPPAG00000025861CSDE19667.699ENSODEG00000005979-9867.699Octodon_degus
ENSPPAG00000025861CSDE110072.827ENSONIG00000009309csde110075.214Oreochromis_niloticus
ENSPPAG00000025861CSDE15174.091ENSOANG00000004518-10075.000Ornithorhynchus_anatinus
ENSPPAG00000025861CSDE19291.259ENSOANG00000003346-10079.676Ornithorhynchus_anatinus
ENSPPAG00000025861CSDE110098.566ENSOCUG00000016438CSDE110098.104Oryctolagus_cuniculus
ENSPPAG00000025861CSDE110077.503ENSORLG00000000707csde110077.503Oryzias_latipes
ENSPPAG00000025861CSDE110074.561ENSORLG00020005148csde110075.214Oryzias_latipes_hni
ENSPPAG00000025861CSDE110077.503ENSORLG00015019415csde110077.503Oryzias_latipes_hsok
ENSPPAG00000025861CSDE110078.052ENSOMEG00000015656csde110078.052Oryzias_melastigma
ENSPPAG00000025861CSDE110099.348ENSOGAG00000012127CSDE110098.893Otolemur_garnettii
ENSPPAG00000025861CSDE110098.957ENSOARG00000020034CSDE110098.770Ovis_aries
ENSPPAG00000025861CSDE110099.348ENSPPRG00000006747CSDE110099.289Panthera_pardus
ENSPPAG00000025861CSDE110099.348ENSPTIG00000015468CSDE110099.373Panthera_tigris_altaica
ENSPPAG00000025861CSDE1100100.000ENSPTRG00000033721CSDE1100100.000Pan_troglodytes
ENSPPAG00000025861CSDE1100100.000ENSPANG00000018873CSDE1100100.000Papio_anubis
ENSPPAG00000025861CSDE110077.113ENSPKIG00000009459csde110077.113Paramormyrops_kingsleyae
ENSPPAG00000025861CSDE19195.354ENSPSIG00000003823CSDE19695.354Pelodiscus_sinensis
ENSPPAG00000025861CSDE110077.273ENSPMGG00000000772csde110077.273Periophthalmus_magnuspinnatus
ENSPPAG00000025861CSDE19998.802ENSPEMG00000020357-10098.802Peromyscus_maniculatus_bairdii
ENSPPAG00000025861CSDE110094.215ENSPCIG00000022587CSDE110096.241Phascolarctos_cinereus
ENSPPAG00000025861CSDE19975.311ENSPFOG00000012664csde110075.776Poecilia_formosa
ENSPPAG00000025861CSDE19771.275ENSPLAG00000017680csde19371.275Poecilia_latipinna
ENSPPAG00000025861CSDE19871.168ENSPMEG00000005094csde19671.168Poecilia_mexicana
ENSPPAG00000025861CSDE110073.441ENSPREG00000011631csde19183.396Poecilia_reticulata
ENSPPAG00000025861CSDE110095.990ENSPPYG00000000996CSDE110099.875Pongo_abelii
ENSPPAG00000025861CSDE110098.574ENSPCAG00000014368CSDE19698.574Procavia_capensis
ENSPPAG00000025861CSDE110099.218ENSPCOG00000017893CSDE110099.218Propithecus_coquereli
ENSPPAG00000025861CSDE110078.896ENSPCOG00000008223-10078.896Propithecus_coquereli
ENSPPAG00000025861CSDE110092.829ENSPVAG00000008225CSDE110092.743Pteropus_vampyrus
ENSPPAG00000025861CSDE110077.373ENSPNYG00000013745csde110077.373Pundamilia_nyererei
ENSPPAG00000025861CSDE110077.662ENSPNAG00000001958csde110077.662Pygocentrus_nattereri
ENSPPAG00000025861CSDE110094.737ENSRNOG00000061058Csde110098.622Rattus_norvegicus
ENSPPAG00000025861CSDE110096.224ENSRBIG00000038088-9998.387Rhinopithecus_bieti
ENSPPAG00000025861CSDE110094.601ENSRBIG00000038966-10097.674Rhinopithecus_bieti
ENSPPAG00000025861CSDE1100100.000ENSRROG00000043101CSDE1100100.000Rhinopithecus_roxellana
ENSPPAG00000025861CSDE110099.763ENSSBOG00000035592CSDE110099.763Saimiri_boliviensis_boliviensis
ENSPPAG00000025861CSDE110095.958ENSSHAG00000009831CSDE110095.958Sarcophilus_harrisii
ENSPPAG00000025861CSDE110076.983ENSSFOG00015007498csde110076.983Scleropages_formosus
ENSPPAG00000025861CSDE110078.182ENSSMAG00000007203csde110078.182Scophthalmus_maximus
ENSPPAG00000025861CSDE110077.662ENSSDUG00000015380csde110077.662Seriola_dumerili
ENSPPAG00000025861CSDE110077.662ENSSLDG00000008819csde110077.662Seriola_lalandi_dorsalis
ENSPPAG00000025861CSDE110097.914ENSSARG00000000738CSDE110096.806Sorex_araneus
ENSPPAG00000025861CSDE110091.656ENSSPUG00000008714CSDE110091.980Sphenodon_punctatus
ENSPPAG00000025861CSDE110077.662ENSSPAG00000000716csde110077.662Stegastes_partitus
ENSPPAG00000025861CSDE110099.348ENSSSCG00000006752CSDE110099.348Sus_scrofa
ENSPPAG00000025861CSDE110087.125ENSTGUG00000000972CSDE110091.000Taeniopygia_guttata
ENSPPAG00000025861CSDE110074.512ENSTRUG00000007996csde110074.512Takifugu_rubripes
ENSPPAG00000025861CSDE18783.721ENSTNIG00000010878csde19883.721Tetraodon_nigroviridis
ENSPPAG00000025861CSDE18798.718ENSTBEG00000011880-6798.718Tupaia_belangeri
ENSPPAG00000025861CSDE110098.566ENSTTRG00000015583CSDE110098.401Tursiops_truncatus
ENSPPAG00000025861CSDE15881.395ENSUAMG00000021782-9781.395Ursus_americanus
ENSPPAG00000025861CSDE18998.714ENSUAMG00000021779-10098.714Ursus_americanus
ENSPPAG00000025861CSDE19489.655ENSUAMG00000024289-9994.525Ursus_americanus
ENSPPAG00000025861CSDE15881.395ENSUMAG00000011713-9781.395Ursus_maritimus
ENSPPAG00000025861CSDE19796.324ENSUMAG00000011714-9999.525Ursus_maritimus
ENSPPAG00000025861CSDE110091.525ENSUMAG00000009720-9891.180Ursus_maritimus
ENSPPAG00000025861CSDE110098.592ENSVPAG00000000749CSDE18598.592Vicugna_pacos
ENSPPAG00000025861CSDE19394.737ENSVVUG00000009890CSDE19499.269Vulpes_vulpes
ENSPPAG00000025861CSDE110082.397ENSXETG00000021448csde110086.017Xenopus_tropicalis
ENSPPAG00000025861CSDE19285.455ENSXCOG00000000035csde19978.041Xiphophorus_couchianus
ENSPPAG00000025861CSDE19877.719ENSXMAG00000009080csde19877.719Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us