EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000026651 (Gene tree)
Gene ID: 100992111
Gene Symbol: PNLDC1
Alias: -
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 21977 bases
Position: chr6:162694724-162716700
Accession: 100992111
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000007402	CAF1	PF04857.20	2e-79	1	1
ENSPPAP00000007406	CAF1	PF04857.20	1.1e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000029735	PNLDC1-201	3417	XM_003807396	ENSPPAP00000007402	531 (aa)	XP_003807444	A0A2R8ZR07
ENSPPAT00000029741	PNLDC1-202	1581	-	ENSPPAP00000007406	526 (aa)	-	A0A2R8ZR16

Gene Model

Click here to download ENSPPAG00000026651's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000026651's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000026651	PNLDC1	99	98.868	ENSG00000146453	PNLDC1	99	98.868	Homo_sapiens
ENSPPAG00000026651	PNLDC1	99	86.553	ENSAMEG00000015371	PNLDC1	99	86.553	Ailuropoda_melanoleuca
ENSPPAG00000026651	PNLDC1	95	58.039	ENSAPLG00000007014	PNLDC1	97	58.039	Anas_platyrhynchos
ENSPPAG00000026651	PNLDC1	99	59.510	ENSACAG00000013667	PNLDC1	99	59.510	Anolis_carolinensis
ENSPPAG00000026651	PNLDC1	100	92.279	ENSANAG00000034713	PNLDC1	100	92.279	Aotus_nancymaae
ENSPPAG00000026651	PNLDC1	95	86.561	ENSBTAG00000015166	PNLDC1	96	86.561	Bos_taurus
ENSPPAG00000026651	PNLDC1	100	92.090	ENSCJAG00000011865	PNLDC1	100	92.090	Callithrix_jacchus
ENSPPAG00000026651	PNLDC1	100	87.382	ENSCAFG00000000740	PNLDC1	100	87.382	Canis_familiaris
ENSPPAG00000026651	PNLDC1	100	85.526	ENSCAFG00020017742	PNLDC1	100	85.526	Canis_lupus_dingo
ENSPPAG00000026651	PNLDC1	100	84.934	ENSCHIG00000003141	PNLDC1	100	84.934	Capra_hircus
ENSPPAG00000026651	PNLDC1	100	89.642	ENSTSYG00000005606	PNLDC1	100	89.642	Carlito_syrichta
ENSPPAG00000026651	PNLDC1	100	61.553	ENSCAPG00000011893	PNLDC1	100	61.553	Cavia_aperea
ENSPPAG00000026651	PNLDC1	100	78.571	ENSCPOG00000019565	PNLDC1	100	78.571	Cavia_porcellus
ENSPPAG00000026651	PNLDC1	100	93.409	ENSCCAG00000026232	PNLDC1	100	93.409	Cebus_capucinus
ENSPPAG00000026651	PNLDC1	100	95.480	ENSCATG00000033196	PNLDC1	100	95.480	Cercocebus_atys
ENSPPAG00000026651	PNLDC1	99	83.396	ENSCLAG00000003228	PNLDC1	99	83.396	Chinchilla_lanigera
ENSPPAG00000026651	PNLDC1	95	95.285	ENSCSAG00000012478	PNLDC1	98	95.285	Chlorocebus_sabaeus
ENSPPAG00000026651	PNLDC1	96	64.844	ENSCPBG00000004050	PNLDC1	100	64.844	Chrysemys_picta_bellii
ENSPPAG00000026651	PNLDC1	95	95.059	ENSCANG00000043076	PNLDC1	97	95.059	Colobus_angolensis_palliatus
ENSPPAG00000026651	PNLDC1	100	80.979	ENSCGRG00001007470	-	99	80.979	Cricetulus_griseus_chok1gshd
ENSPPAG00000026651	PNLDC1	100	65.977	ENSCGRG00001011981	-	99	65.977	Cricetulus_griseus_chok1gshd
ENSPPAG00000026651	PNLDC1	100	68.045	ENSCGRG00000003103	-	99	68.045	Cricetulus_griseus_crigri
ENSPPAG00000026651	PNLDC1	100	80.979	ENSCGRG00000010221	-	99	80.979	Cricetulus_griseus_crigri
ENSPPAG00000026651	PNLDC1	100	85.526	ENSDNOG00000013709	PNLDC1	100	85.526	Dasypus_novemcinctus
ENSPPAG00000026651	PNLDC1	100	79.213	ENSDORG00000011517	Pnldc1	99	86.581	Dipodomys_ordii
ENSPPAG00000026651	PNLDC1	93	75.506	ENSETEG00000007587	PNLDC1	99	75.506	Echinops_telfairi
ENSPPAG00000026651	PNLDC1	100	79.779	ENSEASG00005019029	PNLDC1	100	79.779	Equus_asinus_asinus
ENSPPAG00000026651	PNLDC1	100	87.947	ENSECAG00000012898	PNLDC1	100	87.947	Equus_caballus
ENSPPAG00000026651	PNLDC1	68	81.250	ENSEEUG00000005717	-	86	81.250	Erinaceus_europaeus
ENSPPAG00000026651	PNLDC1	100	87.194	ENSFCAG00000002848	PNLDC1	100	87.194	Felis_catus
ENSPPAG00000026651	PNLDC1	94	56.859	ENSFALG00000012081	PNLDC1	99	56.859	Ficedula_albicollis
ENSPPAG00000026651	PNLDC1	100	83.616	ENSFDAG00000021334	PNLDC1	100	83.616	Fukomys_damarensis
ENSPPAG00000026651	PNLDC1	79	58.670	ENSGALG00000011624	PNLDC1	82	58.670	Gallus_gallus
ENSPPAG00000026651	PNLDC1	99	65.660	ENSGAGG00000015276	PNLDC1	100	66.736	Gopherus_agassizii
ENSPPAG00000026651	PNLDC1	100	98.117	ENSGGOG00000014077	PNLDC1	100	98.117	Gorilla_gorilla
ENSPPAG00000026651	PNLDC1	100	84.369	ENSHGLG00000006889	PNLDC1	100	84.369	Heterocephalus_glaber_female
ENSPPAG00000026651	PNLDC1	100	84.369	ENSHGLG00100018275	PNLDC1	100	84.369	Heterocephalus_glaber_male
ENSPPAG00000026651	PNLDC1	99	88.091	ENSSTOG00000005595	PNLDC1	99	88.091	Ictidomys_tridecemlineatus
ENSPPAG00000026651	PNLDC1	100	79.849	ENSJJAG00000009937	Pnldc1	99	79.849	Jaculus_jaculus
ENSPPAG00000026651	PNLDC1	59	85.397	ENSLAFG00000030189	PNLDC1	92	85.397	Loxodonta_africana
ENSPPAG00000026651	PNLDC1	100	95.857	ENSMFAG00000041296	PNLDC1	100	95.857	Macaca_fascicularis
ENSPPAG00000026651	PNLDC1	100	95.857	ENSMMUG00000004181	PNLDC1	100	95.857	Macaca_mulatta
ENSPPAG00000026651	PNLDC1	100	95.669	ENSMNEG00000034271	PNLDC1	100	95.669	Macaca_nemestrina
ENSPPAG00000026651	PNLDC1	100	92.279	ENSMLEG00000044059	PNLDC1	100	92.279	Mandrillus_leucophaeus
ENSPPAG00000026651	PNLDC1	95	58.465	ENSMGAG00000012470	PNLDC1	97	58.465	Meleagris_gallopavo
ENSPPAG00000026651	PNLDC1	99	66.729	ENSMAUG00000012298	Pnldc1	100	66.729	Mesocricetus_auratus
ENSPPAG00000026651	PNLDC1	100	87.947	ENSMICG00000008021	PNLDC1	100	87.947	Microcebus_murinus
ENSPPAG00000026651	PNLDC1	100	85.553	ENSMOCG00000014287	Pnldc1	100	85.553	Microtus_ochrogaster
ENSPPAG00000026651	PNLDC1	99	74.624	ENSMODG00000007420	PNLDC1	99	74.624	Monodelphis_domestica
ENSPPAG00000026651	PNLDC1	100	85.311	MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.311	Mus_caroli
ENSPPAG00000026651	PNLDC1	100	85.311	ENSMUSG00000073460	Pnldc1	100	88.571	Mus_musculus
ENSPPAG00000026651	PNLDC1	100	85.687	MGP_PahariEiJ_G0023361	Pnldc1	100	85.687	Mus_pahari
ENSPPAG00000026651	PNLDC1	100	85.122	MGP_SPRETEiJ_G0021975	Pnldc1	100	85.122	Mus_spretus
ENSPPAG00000026651	PNLDC1	99	86.226	ENSMPUG00000004920	PNLDC1	99	86.226	Mustela_putorius_furo
ENSPPAG00000026651	PNLDC1	100	86.064	ENSMLUG00000000747	PNLDC1	100	86.064	Myotis_lucifugus
ENSPPAG00000026651	PNLDC1	100	86.817	ENSNGAG00000017714	Pnldc1	99	86.817	Nannospalax_galili
ENSPPAG00000026651	PNLDC1	95	96.055	ENSNLEG00000011282	PNLDC1	98	96.055	Nomascus_leucogenys
ENSPPAG00000026651	PNLDC1	61	63.750	ENSMEUG00000011926	-	64	63.750	Notamacropus_eugenii
ENSPPAG00000026651	PNLDC1	55	66.667	ENSMEUG00000014042	-	100	66.667	Notamacropus_eugenii
ENSPPAG00000026651	PNLDC1	79	86.364	ENSOPRG00000003813	PNLDC1	79	86.364	Ochotona_princeps
ENSPPAG00000026651	PNLDC1	100	82.863	ENSODEG00000008047	PNLDC1	100	82.863	Octodon_degus
ENSPPAG00000026651	PNLDC1	99	56.792	ENSOANG00000012199	PNLDC1	99	58.868	Ornithorhynchus_anatinus
ENSPPAG00000026651	PNLDC1	100	85.876	ENSOCUG00000013867	PNLDC1	100	85.876	Oryctolagus_cuniculus
ENSPPAG00000026651	PNLDC1	99	89.036	ENSOGAG00000007331	PNLDC1	100	89.036	Otolemur_garnettii
ENSPPAG00000026651	PNLDC1	100	85.122	ENSOARG00000004585	PNLDC1	100	85.122	Ovis_aries
ENSPPAG00000026651	PNLDC1	100	87.194	ENSPPRG00000012854	PNLDC1	100	87.194	Panthera_pardus
ENSPPAG00000026651	PNLDC1	99	82.765	ENSPTIG00000011501	PNLDC1	99	82.765	Panthera_tigris_altaica
ENSPPAG00000026651	PNLDC1	100	100.000	ENSPTRG00000018762	PNLDC1	100	100.000	Pan_troglodytes
ENSPPAG00000026651	PNLDC1	100	96.045	ENSPANG00000022009	PNLDC1	100	96.045	Papio_anubis
ENSPPAG00000026651	PNLDC1	61	55.385	ENSPSIG00000011419	PNLDC1	99	55.385	Pelodiscus_sinensis
ENSPPAG00000026651	PNLDC1	100	85.876	ENSPEMG00000016301	Pnldc1	99	85.876	Peromyscus_maniculatus_bairdii
ENSPPAG00000026651	PNLDC1	86	30.629	ENSPMAG00000003956	parn	90	30.832	Petromyzon_marinus
ENSPPAG00000026651	PNLDC1	83	75.566	ENSPCIG00000023412	PNLDC1	100	75.566	Phascolarctos_cinereus
ENSPPAG00000026651	PNLDC1	100	89.850	ENSPPYG00000017148	PNLDC1	100	89.850	Pongo_abelii
ENSPPAG00000026651	PNLDC1	99	76.515	ENSPCAG00000014169	PNLDC1	99	76.515	Procavia_capensis
ENSPPAG00000026651	PNLDC1	100	88.701	ENSPCOG00000025722	PNLDC1	100	88.701	Propithecus_coquereli
ENSPPAG00000026651	PNLDC1	70	30.100	ENSPVAG00000002547	PARN	62	30.100	Pteropus_vampyrus
ENSPPAG00000026651	PNLDC1	73	89.610	ENSPVAG00000005325	PNLDC1	73	89.610	Pteropus_vampyrus
ENSPPAG00000026651	PNLDC1	100	85.311	ENSRNOG00000023140	Pnldc1	100	85.625	Rattus_norvegicus
ENSPPAG00000026651	PNLDC1	100	95.480	ENSRBIG00000033806	PNLDC1	100	95.480	Rhinopithecus_bieti
ENSPPAG00000026651	PNLDC1	95	95.652	ENSRROG00000043919	PNLDC1	97	95.652	Rhinopithecus_roxellana
ENSPPAG00000026651	PNLDC1	100	93.409	ENSSBOG00000019135	PNLDC1	100	93.409	Saimiri_boliviensis_boliviensis
ENSPPAG00000026651	PNLDC1	95	76.378	ENSSHAG00000015192	PNLDC1	97	76.378	Sarcophilus_harrisii
ENSPPAG00000026651	PNLDC1	54	64.706	ENSSPUG00000004627	PNLDC1	99	65.625	Sphenodon_punctatus
ENSPPAG00000026651	PNLDC1	96	85.686	ENSSSCG00000004046	PNLDC1	99	85.686	Sus_scrofa
ENSPPAG00000026651	PNLDC1	92	57.851	ENSTGUG00000011418	PNLDC1	99	57.938	Taeniopygia_guttata
ENSPPAG00000026651	PNLDC1	96	76.667	ENSTBEG00000009131	PNLDC1	98	76.667	Tupaia_belangeri
ENSPPAG00000026651	PNLDC1	73	82.597	ENSTTRG00000010409	PNLDC1	72	82.597	Tursiops_truncatus
ENSPPAG00000026651	PNLDC1	99	74.630	ENSUAMG00000015783	PNLDC1	99	74.630	Ursus_americanus
ENSPPAG00000026651	PNLDC1	95	79.804	ENSUMAG00000011903	PNLDC1	99	79.804	Ursus_maritimus
ENSPPAG00000026651	PNLDC1	96	88.063	ENSVVUG00000006586	PNLDC1	99	87.269	Vulpes_vulpes