EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000027160 (Gene tree)
Gene ID: 100982209
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 104948 bases
Position: chr17:77633564-77738511
Accession: 100982209
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000007897	Ago_hook	PF10427.9	2e-21	1	1
ENSPPAP00000007904	Ago_hook	PF10427.9	2.1e-21	1	1
ENSPPAP00000007898	Ago_hook	PF10427.9	2.3e-21	1	1
ENSPPAP00000007898	RRM_1	PF00076.22	0.00033	1	1
ENSPPAP00000007897	RRM_1	PF00076.22	0.00034	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000030523	TNRC6C-203	5787	-	ENSPPAP00000007904	1928 (aa)	-	A0A2R8ZSF4
ENSPPAT00000030517	TNRC6C-202	9648	XM_003818281	ENSPPAP00000007898	1689 (aa)	XP_003818329	A0A2R8ZSE5
ENSPPAT00000030515	TNRC6C-201	9756	XM_003818280	ENSPPAP00000007897	1725 (aa)	XP_003818328	A0A2R8ZY86

Gene Model

Click here to download ENSPPAG00000027160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000027160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000027160	TNRC6C	99	37.847	ENSPPAG00000028514	TNRC6B	88	50.000
ENSPPAG00000027160	TNRC6C	98	44.345	ENSPPAG00000028379	TNRC6A	97	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000027160	TNRC6C	100	99.710	ENSG00000078687	TNRC6C	100	100.000	Homo_sapiens
ENSPPAG00000027160	TNRC6C	80	54.310	ENSAPOG00000019749	tnrc6c1	98	49.025	Acanthochromis_polyacanthus
ENSPPAG00000027160	TNRC6C	100	89.724	ENSAMEG00000013756	TNRC6C	99	89.468	Ailuropoda_melanoleuca
ENSPPAG00000027160	TNRC6C	94	48.156	ENSACIG00000008075	tnrc6c1	98	54.235	Amphilophus_citrinellus
ENSPPAG00000027160	TNRC6C	77	69.120	ENSAOCG00000023968	tnrc6c1	99	49.027	Amphiprion_ocellaris
ENSPPAG00000027160	TNRC6C	80	54.354	ENSAPEG00000009020	tnrc6c1	99	48.924	Amphiprion_percula
ENSPPAG00000027160	TNRC6C	100	86.934	ENSAPLG00000005456	TNRC6C	100	86.422	Anas_platyrhynchos
ENSPPAG00000027160	TNRC6C	100	87.384	ENSACAG00000016198	TNRC6C	98	86.562	Anolis_carolinensis
ENSPPAG00000027160	TNRC6C	100	97.987	ENSANAG00000021554	TNRC6C	100	97.987	Aotus_nancymaae
ENSPPAG00000027160	TNRC6C	94	48.419	ENSACLG00000000424	tnrc6c1	98	53.243	Astatotilapia_calliptera
ENSPPAG00000027160	TNRC6C	100	87.891	ENSBTAG00000018658	TNRC6C	100	88.187	Bos_taurus
ENSPPAG00000027160	TNRC6C	100	97.928	ENSCJAG00000019431	TNRC6C	100	97.928	Callithrix_jacchus
ENSPPAG00000027160	TNRC6C	100	91.546	ENSCAFG00000005224	TNRC6C	99	91.132	Canis_familiaris
ENSPPAG00000027160	TNRC6C	100	91.182	ENSCAFG00020006661	TNRC6C	99	91.601	Canis_lupus_dingo
ENSPPAG00000027160	TNRC6C	100	87.574	ENSCHIG00000026004	TNRC6C	100	86.118	Capra_hircus
ENSPPAG00000027160	TNRC6C	100	95.768	ENSTSYG00000005403	TNRC6C	100	95.768	Carlito_syrichta
ENSPPAG00000027160	TNRC6C	100	85.059	ENSCAPG00000007307	TNRC6C	99	84.285	Cavia_aperea
ENSPPAG00000027160	TNRC6C	100	90.349	ENSCPOG00000000467	TNRC6C	100	88.390	Cavia_porcellus
ENSPPAG00000027160	TNRC6C	100	98.377	ENSCCAG00000030524	TNRC6C	100	98.377	Cebus_capucinus
ENSPPAG00000027160	TNRC6C	100	98.899	ENSCATG00000033135	TNRC6C	100	98.899	Cercocebus_atys
ENSPPAG00000027160	TNRC6C	100	93.132	ENSCLAG00000011139	TNRC6C	99	90.444	Chinchilla_lanigera
ENSPPAG00000027160	TNRC6C	100	98.841	ENSCSAG00000005167	TNRC6C	99	97.922	Chlorocebus_sabaeus
ENSPPAG00000027160	TNRC6C	75	91.892	ENSCHOG00000000088	TNRC6C	72	91.011	Choloepus_hoffmanni
ENSPPAG00000027160	TNRC6C	100	87.891	ENSCPBG00000027960	TNRC6C	100	87.891	Chrysemys_picta_bellii
ENSPPAG00000027160	TNRC6C	100	98.551	ENSCANG00000041771	TNRC6C	100	98.551	Colobus_angolensis_palliatus
ENSPPAG00000027160	TNRC6C	100	89.511	ENSCGRG00001022686	Tnrc6c	100	88.391	Cricetulus_griseus_chok1gshd
ENSPPAG00000027160	TNRC6C	100	89.935	ENSCGRG00000018041	Tnrc6c	100	88.391	Cricetulus_griseus_crigri
ENSPPAG00000027160	TNRC6C	93	51.182	ENSCSEG00000012744	tnrc6c1	98	45.887	Cynoglossus_semilaevis
ENSPPAG00000027160	TNRC6C	100	54.478	ENSDARG00000076847	tnrc6c1	99	54.514	Danio_rerio
ENSPPAG00000027160	TNRC6C	100	91.324	ENSDNOG00000003247	TNRC6C	99	89.213	Dasypus_novemcinctus
ENSPPAG00000027160	TNRC6C	100	86.051	ENSDORG00000004558	Tnrc6c	100	85.933	Dipodomys_ordii
ENSPPAG00000027160	TNRC6C	90	83.130	ENSETEG00000005527	TNRC6C	86	83.715	Echinops_telfairi
ENSPPAG00000027160	TNRC6C	100	91.302	ENSEASG00005004799	TNRC6C	100	91.361	Equus_asinus_asinus
ENSPPAG00000027160	TNRC6C	100	91.425	ENSECAG00000012486	TNRC6C	99	90.710	Equus_caballus
ENSPPAG00000027160	TNRC6C	96	91.497	ENSEEUG00000010008	TNRC6C	96	92.047	Erinaceus_europaeus
ENSPPAG00000027160	TNRC6C	100	89.309	ENSFCAG00000028358	TNRC6C	100	89.250	Felis_catus
ENSPPAG00000027160	TNRC6C	100	86.897	ENSFALG00000000848	TNRC6C	100	86.217	Ficedula_albicollis
ENSPPAG00000027160	TNRC6C	100	91.356	ENSFDAG00000010368	TNRC6C	100	89.680	Fukomys_damarensis
ENSPPAG00000027160	TNRC6C	89	70.840	ENSFHEG00000002936	tnrc6c1	99	45.812	Fundulus_heteroclitus
ENSPPAG00000027160	TNRC6C	100	88.876	ENSGALG00000001725	TNRC6C	100	88.402	Gallus_gallus
ENSPPAG00000027160	TNRC6C	100	48.785	ENSGAFG00000019019	tnrc6c1	100	48.868	Gambusia_affinis
ENSPPAG00000027160	TNRC6C	93	52.529	ENSGACG00000012320	tnrc6c1	99	47.157	Gasterosteus_aculeatus
ENSPPAG00000027160	TNRC6C	100	87.514	ENSGAGG00000022043	TNRC6C	99	87.321	Gopherus_agassizii
ENSPPAG00000027160	TNRC6C	100	98.957	ENSGGOG00000011304	TNRC6C	100	99.065	Gorilla_gorilla
ENSPPAG00000027160	TNRC6C	100	47.677	ENSHBUG00000010846	tnrc6c1	98	53.474	Haplochromis_burtoni
ENSPPAG00000027160	TNRC6C	100	92.422	ENSHGLG00000004809	TNRC6C	99	89.666	Heterocephalus_glaber_female
ENSPPAG00000027160	TNRC6C	100	91.397	ENSHGLG00100012597	TNRC6C	99	89.823	Heterocephalus_glaber_male
ENSPPAG00000027160	TNRC6C	99	50.690	ENSIPUG00000000818	tnrc6c1	98	51.404	Ictalurus_punctatus
ENSPPAG00000027160	TNRC6C	100	91.130	ENSSTOG00000009101	TNRC6C	100	88.796	Ictidomys_tridecemlineatus
ENSPPAG00000027160	TNRC6C	100	88.627	ENSJJAG00000017055	Tnrc6c	99	86.802	Jaculus_jaculus
ENSPPAG00000027160	TNRC6C	99	48.271	ENSKMAG00000021023	tnrc6c1	100	50.576	Kryptolebias_marmoratus
ENSPPAG00000027160	TNRC6C	100	75.601	ENSLACG00000015283	TNRC6C	100	74.249	Latimeria_chalumnae
ENSPPAG00000027160	TNRC6C	99	56.529	ENSLOCG00000013377	tnrc6c1	99	54.773	Lepisosteus_oculatus
ENSPPAG00000027160	TNRC6C	100	90.748	ENSLAFG00000011122	TNRC6C	99	89.034	Loxodonta_africana
ENSPPAG00000027160	TNRC6C	100	99.014	ENSMFAG00000043943	TNRC6C	100	99.014	Macaca_fascicularis
ENSPPAG00000027160	TNRC6C	100	99.014	ENSMMUG00000011924	TNRC6C	100	98.934	Macaca_mulatta
ENSPPAG00000027160	TNRC6C	100	98.875	ENSMNEG00000030405	TNRC6C	100	98.875	Macaca_nemestrina
ENSPPAG00000027160	TNRC6C	100	98.957	ENSMLEG00000033436	TNRC6C	100	98.957	Mandrillus_leucophaeus
ENSPPAG00000027160	TNRC6C	94	54.729	ENSMAMG00000023613	tnrc6c1	100	51.285	Mastacembelus_armatus
ENSPPAG00000027160	TNRC6C	98	50.297	ENSMZEG00005010920	tnrc6c1	98	53.243	Maylandia_zebra
ENSPPAG00000027160	TNRC6C	100	80.069	ENSMGAG00000003906	TNRC6C	100	80.610	Meleagris_gallopavo
ENSPPAG00000027160	TNRC6C	100	89.393	ENSMAUG00000021618	Tnrc6c	100	89.334	Mesocricetus_auratus
ENSPPAG00000027160	TNRC6C	100	94.377	ENSMICG00000003952	TNRC6C	100	94.261	Microcebus_murinus
ENSPPAG00000027160	TNRC6C	100	91.533	ENSMOCG00000015879	Tnrc6c	100	89.063	Microtus_ochrogaster
ENSPPAG00000027160	TNRC6C	93	55.652	ENSMMOG00000005203	tnrc6c1	100	50.621	Mola_mola
ENSPPAG00000027160	TNRC6C	100	86.882	ENSMODG00000001785	TNRC6C	99	84.984	Monodelphis_domestica
ENSPPAG00000027160	TNRC6C	100	91.119	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.671	Mus_caroli
ENSPPAG00000027160	TNRC6C	100	90.882	ENSMUSG00000025571	Tnrc6c	100	88.446	Mus_musculus
ENSPPAG00000027160	TNRC6C	100	90.941	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.503	Mus_pahari
ENSPPAG00000027160	TNRC6C	100	90.941	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.503	Mus_spretus
ENSPPAG00000027160	TNRC6C	100	88.998	ENSMPUG00000013348	TNRC6C	97	88.628	Mustela_putorius_furo
ENSPPAG00000027160	TNRC6C	100	82.296	ENSMLUG00000014431	TNRC6C	97	82.001	Myotis_lucifugus
ENSPPAG00000027160	TNRC6C	100	90.631	ENSNGAG00000012203	Tnrc6c	99	89.086	Nannospalax_galili
ENSPPAG00000027160	TNRC6C	93	53.288	ENSNBRG00000005344	tnrc6c1	98	54.229	Neolamprologus_brichardi
ENSPPAG00000027160	TNRC6C	100	95.903	ENSNLEG00000000047	TNRC6C	99	95.767	Nomascus_leucogenys
ENSPPAG00000027160	TNRC6C	97	81.576	ENSMEUG00000005104	TNRC6C	99	89.583	Notamacropus_eugenii
ENSPPAG00000027160	TNRC6C	100	91.829	ENSODEG00000012499	TNRC6C	100	92.007	Octodon_degus
ENSPPAG00000027160	TNRC6C	94	51.338	ENSONIG00000002210	tnrc6c1	100	51.081	Oreochromis_niloticus
ENSPPAG00000027160	TNRC6C	99	63.472	ENSOANG00000009758	-	100	61.091	Ornithorhynchus_anatinus
ENSPPAG00000027160	TNRC6C	84	80.153	ENSOCUG00000006122	TNRC6C	95	76.653	Oryctolagus_cuniculus
ENSPPAG00000027160	TNRC6C	91	50.337	ENSORLG00000009837	tnrc6c1	100	66.914	Oryzias_latipes
ENSPPAG00000027160	TNRC6C	92	50.270	ENSORLG00020016510	tnrc6c1	100	49.140	Oryzias_latipes_hni
ENSPPAG00000027160	TNRC6C	72	45.497	ENSORLG00015000171	tnrc6c1	98	44.675	Oryzias_latipes_hsok
ENSPPAG00000027160	TNRC6C	92	50.629	ENSOMEG00000000357	tnrc6c1	99	47.969	Oryzias_melastigma
ENSPPAG00000027160	TNRC6C	100	92.986	ENSOGAG00000007197	TNRC6C	100	92.986	Otolemur_garnettii
ENSPPAG00000027160	TNRC6C	96	84.806	ENSOARG00000006041	TNRC6C	97	84.956	Ovis_aries
ENSPPAG00000027160	TNRC6C	100	89.309	ENSPPRG00000018881	TNRC6C	100	89.250	Panthera_pardus
ENSPPAG00000027160	TNRC6C	90	86.463	ENSPTIG00000008791	TNRC6C	81	96.131	Panthera_tigris_altaica
ENSPPAG00000027160	TNRC6C	100	99.884	ENSPTRG00000009699	TNRC6C	100	99.896	Pan_troglodytes
ENSPPAG00000027160	TNRC6C	100	98.816	ENSPANG00000019994	TNRC6C	100	98.816	Papio_anubis
ENSPPAG00000027160	TNRC6C	96	52.894	ENSPKIG00000005428	tnrc6c1	100	51.688	Paramormyrops_kingsleyae
ENSPPAG00000027160	TNRC6C	100	86.339	ENSPSIG00000018069	TNRC6C	100	84.004	Pelodiscus_sinensis
ENSPPAG00000027160	TNRC6C	74	57.505	ENSPMGG00000022911	tnrc6c1	97	63.265	Periophthalmus_magnuspinnatus
ENSPPAG00000027160	TNRC6C	100	90.748	ENSPEMG00000009785	Tnrc6c	100	88.332	Peromyscus_maniculatus_bairdii
ENSPPAG00000027160	TNRC6C	58	85.949	ENSPCIG00000017421	-	99	85.802	Phascolarctos_cinereus
ENSPPAG00000027160	TNRC6C	100	48.438	ENSPFOG00000012560	tnrc6c1	97	57.203	Poecilia_formosa
ENSPPAG00000027160	TNRC6C	100	49.636	ENSPLAG00000021055	tnrc6c1	100	49.663	Poecilia_latipinna
ENSPPAG00000027160	TNRC6C	100	99.420	ENSPPYG00000008679	TNRC6C	98	98.649	Pongo_abelii
ENSPPAG00000027160	TNRC6C	93	92.417	ENSPCAG00000012510	TNRC6C	91	92.417	Procavia_capensis
ENSPPAG00000027160	TNRC6C	100	94.841	ENSPCOG00000021451	TNRC6C	100	94.841	Propithecus_coquereli
ENSPPAG00000027160	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSPPAG00000027160	TNRC6C	100	47.517	ENSPNYG00000014477	tnrc6c1	98	52.945	Pundamilia_nyererei
ENSPPAG00000027160	TNRC6C	100	90.302	ENSRNOG00000022395	Tnrc6c	100	90.302	Rattus_norvegicus
ENSPPAG00000027160	TNRC6C	100	98.899	ENSRBIG00000027777	TNRC6C	100	98.899	Rhinopithecus_bieti
ENSPPAG00000027160	TNRC6C	100	98.957	ENSRROG00000042912	TNRC6C	100	98.957	Rhinopithecus_roxellana
ENSPPAG00000027160	TNRC6C	100	97.739	ENSSBOG00000023981	TNRC6C	100	97.739	Saimiri_boliviensis_boliviensis
ENSPPAG00000027160	TNRC6C	54	90.162	ENSSHAG00000018330	-	100	89.514	Sarcophilus_harrisii
ENSPPAG00000027160	TNRC6C	76	56.499	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSPPAG00000027160	TNRC6C	91	57.781	ENSSFOG00015006475	tnrc6c1	99	51.902	Scleropages_formosus
ENSPPAG00000027160	TNRC6C	100	48.863	ENSSMAG00000012761	tnrc6c1	99	50.460	Scophthalmus_maximus
ENSPPAG00000027160	TNRC6C	100	50.599	ENSSDUG00000002366	tnrc6c1	99	49.578	Seriola_dumerili
ENSPPAG00000027160	TNRC6C	100	48.806	ENSSLDG00000025613	tnrc6c1	100	49.861	Seriola_lalandi_dorsalis
ENSPPAG00000027160	TNRC6C	91	90.517	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSPPAG00000027160	TNRC6C	83	86.597	ENSSPUG00000007341	TNRC6C	98	86.667	Sphenodon_punctatus
ENSPPAG00000027160	TNRC6C	79	53.714	ENSSPAG00000014977	tnrc6c1	97	48.755	Stegastes_partitus
ENSPPAG00000027160	TNRC6C	97	90.951	ENSSSCG00000034373	TNRC6C	100	87.987	Sus_scrofa
ENSPPAG00000027160	TNRC6C	100	88.291	ENSTGUG00000007733	TNRC6C	100	85.962	Taeniopygia_guttata
ENSPPAG00000027160	TNRC6C	87	54.673	ENSTRUG00000011685	tnrc6c1	100	49.530	Takifugu_rubripes
ENSPPAG00000027160	TNRC6C	88	52.694	ENSTNIG00000005273	tnrc6c1	100	60.746	Tetraodon_nigroviridis
ENSPPAG00000027160	TNRC6C	64	90.234	ENSTBEG00000005046	TNRC6C	100	82.410	Tupaia_belangeri
ENSPPAG00000027160	TNRC6C	100	91.130	ENSTTRG00000010828	TNRC6C	97	91.189	Tursiops_truncatus
ENSPPAG00000027160	TNRC6C	100	89.389	ENSUMAG00000013614	TNRC6C	99	89.885	Ursus_maritimus
ENSPPAG00000027160	TNRC6C	52	81.093	ENSVPAG00000006765	-	99	81.100	Vicugna_pacos
ENSPPAG00000027160	TNRC6C	100	91.839	ENSVVUG00000015268	TNRC6C	100	91.839	Vulpes_vulpes
ENSPPAG00000027160	TNRC6C	100	75.264	ENSXETG00000019470	tnrc6c	100	74.618	Xenopus_tropicalis
ENSPPAG00000027160	TNRC6C	100	49.799	ENSXMAG00000025971	tnrc6c1	100	48.785	Xiphophorus_maculatus