EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000027657 (Gene tree)
Gene ID: 100987748
Gene Symbol: APOBEC1
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 4942 bases
Position: chr12:7939262-7944203
Accession: 100987748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000008823	APOBEC_N	PF08210.11	6.3e-24	1	1
ENSPPAP00000008823	APOBEC_C	PF05240.14	4.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000031462	APOBEC1-201	657	XM_003811792	ENSPPAP00000008823	218 (aa)	XP_003811840	A0A2R9A0R0

Gene Model

Click here to download ENSPPAG00000027657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000027657's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000027657	APOBEC1	98	90.476	ENSG00000111701	APOBEC1	98	90.476	Homo_sapiens
ENSPPAG00000027657	APOBEC1	100	75.424	ENSAMEG00000007098	APOBEC1	100	75.424	Ailuropoda_melanoleuca
ENSPPAG00000027657	APOBEC1	70	38.462	ENSACAG00000028578	-	93	38.462	Anolis_carolinensis
ENSPPAG00000027657	APOBEC1	98	81.385	ENSANAG00000027743	APOBEC1	93	81.385	Aotus_nancymaae
ENSPPAG00000027657	APOBEC1	98	67.965	ENSBTAG00000014683	APOBEC1	98	67.965	Bos_taurus
ENSPPAG00000027657	APOBEC1	93	80.543	ENSCJAG00000005398	APOBEC1	100	80.543	Callithrix_jacchus
ENSPPAG00000027657	APOBEC1	99	72.961	ENSCAFG00000013901	APOBEC1	99	72.961	Canis_familiaris
ENSPPAG00000027657	APOBEC1	95	72.124	ENSCAFG00020003511	APOBEC1	95	72.124	Canis_lupus_dingo
ENSPPAG00000027657	APOBEC1	100	68.220	ENSCHIG00000011898	APOBEC1	98	68.220	Capra_hircus
ENSPPAG00000027657	APOBEC1	56	73.759	ENSTSYG00000029141	APOBEC1	100	73.759	Carlito_syrichta
ENSPPAG00000027657	APOBEC1	90	63.256	ENSCAPG00000015882	-	100	63.256	Cavia_aperea
ENSPPAG00000027657	APOBEC1	98	63.793	ENSCPOG00000033068	APOBEC1	98	63.793	Cavia_porcellus
ENSPPAG00000027657	APOBEC1	98	82.251	ENSCCAG00000022258	APOBEC1	98	82.251	Cebus_capucinus
ENSPPAG00000027657	APOBEC1	98	87.013	ENSCATG00000021613	APOBEC1	93	87.013	Cercocebus_atys
ENSPPAG00000027657	APOBEC1	96	64.317	ENSCLAG00000014645	APOBEC1	99	64.317	Chinchilla_lanigera
ENSPPAG00000027657	APOBEC1	79	84.293	ENSCSAG00000009817	APOBEC1	100	84.293	Chlorocebus_sabaeus
ENSPPAG00000027657	APOBEC1	50	76.852	ENSCHOG00000002355	-	89	76.852	Choloepus_hoffmanni
ENSPPAG00000027657	APOBEC1	75	42.473	ENSCPBG00000017398	-	82	42.473	Chrysemys_picta_bellii
ENSPPAG00000027657	APOBEC1	93	41.071	ENSCPBG00000014331	-	90	41.071	Chrysemys_picta_bellii
ENSPPAG00000027657	APOBEC1	77	45.455	ENSCPBG00000014335	-	76	45.455	Chrysemys_picta_bellii
ENSPPAG00000027657	APOBEC1	77	44.681	ENSCPBG00000014328	-	82	44.681	Chrysemys_picta_bellii
ENSPPAG00000027657	APOBEC1	89	38.028	ENSCPBG00000014327	-	82	38.967	Chrysemys_picta_bellii
ENSPPAG00000027657	APOBEC1	81	47.449	ENSCPBG00000014329	-	54	47.449	Chrysemys_picta_bellii
ENSPPAG00000027657	APOBEC1	97	86.957	ENSCANG00000038359	APOBEC1	100	86.957	Colobus_angolensis_palliatus
ENSPPAG00000027657	APOBEC1	97	65.939	ENSCGRG00001011130	Apobec1	100	65.939	Cricetulus_griseus_chok1gshd
ENSPPAG00000027657	APOBEC1	97	65.939	ENSCGRG00000008644	Apobec1	100	65.939	Cricetulus_griseus_crigri
ENSPPAG00000027657	APOBEC1	99	74.678	ENSDNOG00000010926	APOBEC1	99	74.678	Dasypus_novemcinctus
ENSPPAG00000027657	APOBEC1	89	61.682	ENSDORG00000023717	Apobec1	100	61.682	Dipodomys_ordii
ENSPPAG00000027657	APOBEC1	99	70.213	ENSETEG00000004867	APOBEC1	99	70.213	Echinops_telfairi
ENSPPAG00000027657	APOBEC1	100	75.847	ENSEASG00005015951	APOBEC1	99	75.847	Equus_asinus_asinus
ENSPPAG00000027657	APOBEC1	76	82.530	ENSECAG00000017163	APOBEC1	87	82.530	Equus_caballus
ENSPPAG00000027657	APOBEC1	85	49.510	ENSEEUG00000007530	-	97	49.510	Erinaceus_europaeus
ENSPPAG00000027657	APOBEC1	93	61.086	ENSEEUG00000009112	-	98	61.086	Erinaceus_europaeus
ENSPPAG00000027657	APOBEC1	99	74.678	ENSFCAG00000009350	APOBEC1	99	74.678	Felis_catus
ENSPPAG00000027657	APOBEC1	56	45.324	ENSFALG00000007257	-	70	45.324	Ficedula_albicollis
ENSPPAG00000027657	APOBEC1	87	58.937	ENSFDAG00000018470	APOBEC1	99	58.937	Fukomys_damarensis
ENSPPAG00000027657	APOBEC1	65	47.531	ENSGAGG00000004947	-	83	48.120	Gopherus_agassizii
ENSPPAG00000027657	APOBEC1	82	42.000	ENSGAGG00000006624	-	70	42.000	Gopherus_agassizii
ENSPPAG00000027657	APOBEC1	70	41.379	ENSGAGG00000021745	-	64	41.379	Gopherus_agassizii
ENSPPAG00000027657	APOBEC1	89	38.208	ENSGAGG00000021744	-	81	39.904	Gopherus_agassizii
ENSPPAG00000027657	APOBEC1	87	45.455	ENSGAGG00000011837	-	81	51.456	Gopherus_agassizii
ENSPPAG00000027657	APOBEC1	97	63.043	ENSHGLG00000001495	APOBEC1	97	63.043	Heterocephalus_glaber_female
ENSPPAG00000027657	APOBEC1	97	62.174	ENSHGLG00100002187	APOBEC1	97	62.174	Heterocephalus_glaber_male
ENSPPAG00000027657	APOBEC1	90	60.748	ENSSTOG00000021971	APOBEC1	100	67.347	Ictidomys_tridecemlineatus
ENSPPAG00000027657	APOBEC1	95	69.469	ENSJJAG00000022108	Apobec1	99	69.469	Jaculus_jaculus
ENSPPAG00000027657	APOBEC1	94	70.852	ENSLAFG00000030837	APOBEC1	100	70.852	Loxodonta_africana
ENSPPAG00000027657	APOBEC1	98	87.013	ENSMFAG00000000277	APOBEC1	98	87.013	Macaca_fascicularis
ENSPPAG00000027657	APOBEC1	98	86.580	ENSMNEG00000029670	APOBEC1	98	86.580	Macaca_nemestrina
ENSPPAG00000027657	APOBEC1	98	87.013	ENSMLEG00000036301	APOBEC1	98	87.013	Mandrillus_leucophaeus
ENSPPAG00000027657	APOBEC1	91	65.741	ENSMAUG00000022167	Apobec1	97	65.741	Mesocricetus_auratus
ENSPPAG00000027657	APOBEC1	98	77.056	ENSMICG00000043645	APOBEC1	98	77.056	Microcebus_murinus
ENSPPAG00000027657	APOBEC1	99	63.090	ENSMODG00000018004	APOBEC1	99	63.090	Monodelphis_domestica
ENSPPAG00000027657	APOBEC1	96	65.351	ENSMUSG00000040613	Apobec1	99	65.351	Mus_musculus
ENSPPAG00000027657	APOBEC1	96	64.474	MGP_PahariEiJ_G0022580	-	99	64.474	Mus_pahari
ENSPPAG00000027657	APOBEC1	96	65.351	MGP_SPRETEiJ_G0029857	Apobec1	99	65.351	Mus_spretus
ENSPPAG00000027657	APOBEC1	99	71.245	ENSMPUG00000017532	APOBEC1	99	71.245	Mustela_putorius_furo
ENSPPAG00000027657	APOBEC1	94	66.071	ENSNGAG00000022607	Apobec1	98	66.071	Nannospalax_galili
ENSPPAG00000027657	APOBEC1	98	87.879	ENSNLEG00000005342	APOBEC1	98	87.879	Nomascus_leucogenys
ENSPPAG00000027657	APOBEC1	99	60.086	ENSMEUG00000013406	APOBEC1	99	60.086	Notamacropus_eugenii
ENSPPAG00000027657	APOBEC1	75	57.459	ENSOPRG00000009508	-	100	57.459	Ochotona_princeps
ENSPPAG00000027657	APOBEC1	98	70.130	ENSOCUG00000025736	APOBEC1	87	70.130	Oryctolagus_cuniculus
ENSPPAG00000027657	APOBEC1	100	76.271	ENSOGAG00000026415	APOBEC1	100	76.271	Otolemur_garnettii
ENSPPAG00000027657	APOBEC1	98	67.532	ENSOARG00000002072	APOBEC1	97	67.532	Ovis_aries
ENSPPAG00000027657	APOBEC1	99	74.249	ENSPPRG00000012182	APOBEC1	99	74.249	Panthera_pardus
ENSPPAG00000027657	APOBEC1	99	74.249	ENSPTIG00000020280	APOBEC1	99	74.249	Panthera_tigris_altaica
ENSPPAG00000027657	APOBEC1	98	91.342	ENSPTRG00000004614	APOBEC1	98	91.342	Pan_troglodytes
ENSPPAG00000027657	APOBEC1	98	87.879	ENSPANG00000021027	APOBEC1	98	87.879	Papio_anubis
ENSPPAG00000027657	APOBEC1	98	41.810	ENSPSIG00000012568	-	98	41.810	Pelodiscus_sinensis
ENSPPAG00000027657	APOBEC1	55	55.319	ENSPSIG00000012791	-	65	55.319	Pelodiscus_sinensis
ENSPPAG00000027657	APOBEC1	97	65.939	ENSPEMG00000023841	Apobec1	100	65.939	Peromyscus_maniculatus_bairdii
ENSPPAG00000027657	APOBEC1	99	65.236	ENSPCIG00000023973	APOBEC1	99	65.236	Phascolarctos_cinereus
ENSPPAG00000027657	APOBEC1	98	87.879	ENSPPYG00000004228	APOBEC1	93	87.879	Pongo_abelii
ENSPPAG00000027657	APOBEC1	78	71.123	ENSPCAG00000008733	APOBEC1	100	71.123	Procavia_capensis
ENSPPAG00000027657	APOBEC1	94	77.477	ENSPCOG00000013957	APOBEC1	98	77.477	Propithecus_coquereli
ENSPPAG00000027657	APOBEC1	98	58.009	ENSPVAG00000010709	APOBEC1	98	58.009	Pteropus_vampyrus
ENSPPAG00000027657	APOBEC1	96	64.035	ENSRNOG00000015411	Apobec1	99	64.035	Rattus_norvegicus
ENSPPAG00000027657	APOBEC1	98	86.580	ENSRBIG00000031161	APOBEC1	98	86.580	Rhinopithecus_bieti
ENSPPAG00000027657	APOBEC1	98	86.147	ENSRROG00000033576	APOBEC1	98	86.147	Rhinopithecus_roxellana
ENSPPAG00000027657	APOBEC1	71	81.503	ENSSBOG00000030587	APOBEC1	98	81.503	Saimiri_boliviensis_boliviensis
ENSPPAG00000027657	APOBEC1	96	65.639	ENSSHAG00000008925	APOBEC1	99	65.639	Sarcophilus_harrisii
ENSPPAG00000027657	APOBEC1	52	68.462	ENSSARG00000011972	-	99	68.462	Sorex_araneus
ENSPPAG00000027657	APOBEC1	71	64.327	ENSSARG00000000032	-	100	64.327	Sorex_araneus
ENSPPAG00000027657	APOBEC1	89	38.813	ENSSPUG00000009044	-	83	38.813	Sphenodon_punctatus
ENSPPAG00000027657	APOBEC1	98	74.459	ENSSSCG00000000668	APOBEC1	98	74.459	Sus_scrofa
ENSPPAG00000027657	APOBEC1	57	48.227	ENSTGUG00000013118	-	99	48.227	Taeniopygia_guttata
ENSPPAG00000027657	APOBEC1	93	70.455	ENSTBEG00000010043	APOBEC1	94	70.455	Tupaia_belangeri
ENSPPAG00000027657	APOBEC1	75	69.780	ENSTTRG00000014015	APOBEC1	97	69.780	Tursiops_truncatus
ENSPPAG00000027657	APOBEC1	100	75.424	ENSUAMG00000011636	APOBEC1	97	75.424	Ursus_americanus
ENSPPAG00000027657	APOBEC1	100	75.424	ENSUMAG00000016552	APOBEC1	97	75.424	Ursus_maritimus
ENSPPAG00000027657	APOBEC1	98	70.563	ENSVPAG00000001343	APOBEC1	98	70.563	Vicugna_pacos
ENSPPAG00000027657	APOBEC1	99	72.961	ENSVVUG00000010522	APOBEC1	99	72.961	Vulpes_vulpes