EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000028097 (Gene tree)
Gene ID: 100972987
Gene Symbol: TARBP1
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 87330 bases
Position: chr1:214951792-215039121
Accession: 100972987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000009747	SpoU_methylase	PF00588.19	2.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000032390	TARBP1-201	4326	XM_003824544	ENSPPAP00000009747	1363 (aa)	XP_003824592	A0A2R8ZYU5

Gene Model

Click here to download ENSPPAG00000028097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000028097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000028097	TARBP1	100	98.973	ENSG00000059588	TARBP1	84	98.973	Homo_sapiens
ENSPPAG00000028097	TARBP1	99	45.818	ENSAPOG00000016419	si:dkey-85a20.4	84	45.675	Acanthochromis_polyacanthus
ENSPPAG00000028097	TARBP1	99	85.704	ENSAMEG00000003359	TARBP1	99	85.704	Ailuropoda_melanoleuca
ENSPPAG00000028097	TARBP1	99	46.010	ENSATEG00000020266	si:dkey-85a20.4	83	46.004	Anabas_testudineus
ENSPPAG00000028097	TARBP1	99	67.516	ENSAPLG00000007666	TARBP1	99	68.417	Anas_platyrhynchos
ENSPPAG00000028097	TARBP1	99	63.177	ENSACAG00000001142	TARBP1	85	63.104	Anolis_carolinensis
ENSPPAG00000028097	TARBP1	100	93.397	ENSANAG00000022031	TARBP1	86	93.397	Aotus_nancymaae
ENSPPAG00000028097	TARBP1	99	86.144	ENSBTAG00000004517	TARBP1	84	86.144	Bos_taurus
ENSPPAG00000028097	TARBP1	100	95.451	ENSCJAG00000018155	TARBP1	84	95.451	Callithrix_jacchus
ENSPPAG00000028097	TARBP1	99	86.510	ENSCAFG00000011533	TARBP1	96	86.510	Canis_familiaris
ENSPPAG00000028097	TARBP1	99	86.510	ENSCAFG00020027141	TARBP1	84	86.437	Canis_lupus_dingo
ENSPPAG00000028097	TARBP1	99	85.221	ENSCHIG00000011437	TARBP1	84	85.221	Capra_hircus
ENSPPAG00000028097	TARBP1	96	88.473	ENSTSYG00000010382	TARBP1	97	88.397	Carlito_syrichta
ENSPPAG00000028097	TARBP1	94	69.357	ENSCAPG00000010831	TARBP1	99	69.357	Cavia_aperea
ENSPPAG00000028097	TARBP1	99	79.206	ENSCPOG00000013995	TARBP1	85	79.133	Cavia_porcellus
ENSPPAG00000028097	TARBP1	100	95.965	ENSCCAG00000037278	TARBP1	84	95.965	Cebus_capucinus
ENSPPAG00000028097	TARBP1	100	97.139	ENSCATG00000011754	TARBP1	84	97.139	Cercocebus_atys
ENSPPAG00000028097	TARBP1	96	79.511	ENSCLAG00000003655	TARBP1	96	79.587	Chinchilla_lanigera
ENSPPAG00000028097	TARBP1	94	97.278	ENSCSAG00000010100	TARBP1	100	97.278	Chlorocebus_sabaeus
ENSPPAG00000028097	TARBP1	90	77.199	ENSCPBG00000005587	TARBP1	84	77.199	Chrysemys_picta_bellii
ENSPPAG00000028097	TARBP1	99	97.426	ENSCANG00000034343	TARBP1	100	97.426	Colobus_angolensis_palliatus
ENSPPAG00000028097	TARBP1	99	78.882	ENSCGRG00001016690	Tarbp1	86	78.882	Cricetulus_griseus_chok1gshd
ENSPPAG00000028097	TARBP1	99	78.882	ENSCGRG00000016893	Tarbp1	92	78.882	Cricetulus_griseus_crigri
ENSPPAG00000028097	TARBP1	99	43.475	ENSCSEG00000005255	si:dkey-85a20.4	84	45.680	Cynoglossus_semilaevis
ENSPPAG00000028097	TARBP1	99	46.356	ENSDARG00000079055	si:dkey-85a20.4	99	54.246	Danio_rerio
ENSPPAG00000028097	TARBP1	99	87.226	ENSDNOG00000008637	TARBP1	83	87.153	Dasypus_novemcinctus
ENSPPAG00000028097	TARBP1	95	74.691	ENSDORG00000007984	Tarbp1	100	74.691	Dipodomys_ordii
ENSPPAG00000028097	TARBP1	99	88.653	ENSEASG00005000252	TARBP1	85	88.360	Equus_asinus_asinus
ENSPPAG00000028097	TARBP1	99	88.507	ENSECAG00000023673	TARBP1	84	88.507	Equus_caballus
ENSPPAG00000028097	TARBP1	99	45.362	ENSELUG00000012193	si:dkey-85a20.4	84	45.362	Esox_lucius
ENSPPAG00000028097	TARBP1	99	83.504	ENSFCAG00000014183	TARBP1	84	83.504	Felis_catus
ENSPPAG00000028097	TARBP1	95	68.712	ENSFALG00000013565	TARBP1	99	68.630	Ficedula_albicollis
ENSPPAG00000028097	TARBP1	94	76.776	ENSFDAG00000001308	TARBP1	99	76.700	Fukomys_damarensis
ENSPPAG00000028097	TARBP1	99	38.761	ENSFHEG00000007565	si:dkey-85a20.4	75	54.076	Fundulus_heteroclitus
ENSPPAG00000028097	TARBP1	99	43.350	ENSGMOG00000004549	si:dkey-85a20.4	99	43.278	Gadus_morhua
ENSPPAG00000028097	TARBP1	99	63.842	ENSGALG00000011000	TARBP1	85	72.555	Gallus_gallus
ENSPPAG00000028097	TARBP1	99	45.660	ENSGAFG00000007387	si:dkey-85a20.4	83	45.368	Gambusia_affinis
ENSPPAG00000028097	TARBP1	99	45.794	ENSGACG00000005865	si:dkey-85a20.4	97	45.743	Gasterosteus_aculeatus
ENSPPAG00000028097	TARBP1	99	72.807	ENSGAGG00000012102	TARBP1	88	72.807	Gopherus_agassizii
ENSPPAG00000028097	TARBP1	100	95.315	ENSGGOG00000022879	TARBP1	99	95.315	Gorilla_gorilla
ENSPPAG00000028097	TARBP1	99	46.710	ENSHBUG00000008877	si:dkey-85a20.4	83	46.710	Haplochromis_burtoni
ENSPPAG00000028097	TARBP1	99	80.382	ENSHGLG00000011592	TARBP1	85	80.309	Heterocephalus_glaber_female
ENSPPAG00000028097	TARBP1	99	79.868	ENSHGLG00100015169	TARBP1	94	79.868	Heterocephalus_glaber_male
ENSPPAG00000028097	TARBP1	98	44.600	ENSIPUG00000005249	si:dkey-85a20.4	81	44.355	Ictalurus_punctatus
ENSPPAG00000028097	TARBP1	99	76.580	ENSSTOG00000032291	TARBP1	96	76.431	Ictidomys_tridecemlineatus
ENSPPAG00000028097	TARBP1	99	74.431	ENSJJAG00000017840	Tarbp1	94	74.431	Jaculus_jaculus
ENSPPAG00000028097	TARBP1	75	48.128	ENSKMAG00000017546	si:dkey-85a20.4	72	48.529	Kryptolebias_marmoratus
ENSPPAG00000028097	TARBP1	77	50.402	ENSLBEG00000012132	si:dkey-85a20.4	74	50.536	Labrus_bergylta
ENSPPAG00000028097	TARBP1	99	55.653	ENSLACG00000004337	TARBP1	83	55.775	Latimeria_chalumnae
ENSPPAG00000028097	TARBP1	99	51.209	ENSLOCG00000016214	si:dkey-85a20.4	83	51.061	Lepisosteus_oculatus
ENSPPAG00000028097	TARBP1	99	86.260	ENSLAFG00000011394	TARBP1	86	86.113	Loxodonta_africana
ENSPPAG00000028097	TARBP1	100	94.359	ENSMFAG00000041068	TARBP1	85	94.359	Macaca_fascicularis
ENSPPAG00000028097	TARBP1	100	94.286	ENSMMUG00000021703	TARBP1	84	94.286	Macaca_mulatta
ENSPPAG00000028097	TARBP1	100	97.359	ENSMNEG00000045002	TARBP1	84	97.359	Macaca_nemestrina
ENSPPAG00000028097	TARBP1	99	97.269	ENSMLEG00000044182	TARBP1	100	97.269	Mandrillus_leucophaeus
ENSPPAG00000028097	TARBP1	99	46.462	ENSMAMG00000021760	si:dkey-85a20.4	84	46.389	Mastacembelus_armatus
ENSPPAG00000028097	TARBP1	99	46.638	ENSMZEG00005005751	si:dkey-85a20.4	83	46.638	Maylandia_zebra
ENSPPAG00000028097	TARBP1	99	78.271	ENSMAUG00000020968	Tarbp1	85	78.271	Mesocricetus_auratus
ENSPPAG00000028097	TARBP1	99	80.586	ENSMICG00000015280	TARBP1	83	80.029	Microcebus_murinus
ENSPPAG00000028097	TARBP1	99	77.320	ENSMOCG00000004128	Tarbp1	86	77.320	Microtus_ochrogaster
ENSPPAG00000028097	TARBP1	98	44.712	ENSMMOG00000007795	si:dkey-85a20.4	83	44.712	Mola_mola
ENSPPAG00000028097	TARBP1	99	76.850	ENSMODG00000008504	TARBP1	82	76.777	Monodelphis_domestica
ENSPPAG00000028097	TARBP1	99	45.521	ENSMALG00000002916	si:dkey-85a20.4	84	45.561	Monopterus_albus
ENSPPAG00000028097	TARBP1	99	76.804	MGP_CAROLIEiJ_G0031729	Tarbp1	86	76.804	Mus_caroli
ENSPPAG00000028097	TARBP1	99	76.510	ENSMUSG00000090290	Tarbp1	86	76.510	Mus_musculus
ENSPPAG00000028097	TARBP1	99	77.042	MGP_PahariEiJ_G0023326	Tarbp1	86	77.042	Mus_pahari
ENSPPAG00000028097	TARBP1	99	76.652	MGP_SPRETEiJ_G0032846	Tarbp1	86	76.652	Mus_spretus
ENSPPAG00000028097	TARBP1	91	83.534	ENSMPUG00000002802	TARBP1	99	83.454	Mustela_putorius_furo
ENSPPAG00000028097	TARBP1	99	75.565	ENSMLUG00000002414	TARBP1	99	75.565	Myotis_lucifugus
ENSPPAG00000028097	TARBP1	100	98.459	ENSNLEG00000002518	TARBP1	84	98.459	Nomascus_leucogenys
ENSPPAG00000028097	TARBP1	63	77.119	ENSMEUG00000011370	-	53	77.119	Notamacropus_eugenii
ENSPPAG00000028097	TARBP1	80	86.653	ENSOPRG00000013822	TARBP1	67	86.653	Ochotona_princeps
ENSPPAG00000028097	TARBP1	99	79.060	ENSODEG00000005238	TARBP1	88	79.133	Octodon_degus
ENSPPAG00000028097	TARBP1	99	46.575	ENSONIG00000009789	si:dkey-85a20.4	97	46.647	Oreochromis_niloticus
ENSPPAG00000028097	TARBP1	100	86.070	ENSOCUG00000017418	TARBP1	84	86.070	Oryctolagus_cuniculus
ENSPPAG00000028097	TARBP1	99	43.741	ENSORLG00000010529	si:dkey-85a20.4	83	43.544	Oryzias_latipes
ENSPPAG00000028097	TARBP1	99	43.453	ENSORLG00020019264	si:dkey-85a20.4	83	43.257	Oryzias_latipes_hni
ENSPPAG00000028097	TARBP1	99	43.786	ENSORLG00015003276	si:dkey-85a20.4	83	43.619	Oryzias_latipes_hsok
ENSPPAG00000028097	TARBP1	99	84.960	ENSOGAG00000002379	TARBP1	84	84.960	Otolemur_garnettii
ENSPPAG00000028097	TARBP1	99	84.751	ENSOARG00000003434	TARBP1	90	84.751	Ovis_aries
ENSPPAG00000028097	TARBP1	99	82.749	ENSPPRG00000013561	TARBP1	88	82.602	Panthera_pardus
ENSPPAG00000028097	TARBP1	99	86.012	ENSPTIG00000009281	TARBP1	99	86.012	Panthera_tigris_altaica
ENSPPAG00000028097	TARBP1	100	99.633	ENSPTRG00000002124	TARBP1	84	99.633	Pan_troglodytes
ENSPPAG00000028097	TARBP1	100	97.432	ENSPANG00000021933	TARBP1	84	97.432	Papio_anubis
ENSPPAG00000028097	TARBP1	99	47.489	ENSPKIG00000016716	si:dkey-85a20.4	83	47.489	Paramormyrops_kingsleyae
ENSPPAG00000028097	TARBP1	94	71.085	ENSPSIG00000010699	TARBP1	100	71.008	Pelodiscus_sinensis
ENSPPAG00000028097	TARBP1	99	78.777	ENSPEMG00000006888	Tarbp1	90	78.777	Peromyscus_maniculatus_bairdii
ENSPPAG00000028097	TARBP1	90	82.524	ENSPCIG00000029710	TARBP1	81	82.524	Phascolarctos_cinereus
ENSPPAG00000028097	TARBP1	99	45.633	ENSPFOG00000013020	si:dkey-85a20.4	97	45.633	Poecilia_formosa
ENSPPAG00000028097	TARBP1	99	45.997	ENSPLAG00000006044	si:dkey-85a20.4	83	45.586	Poecilia_latipinna
ENSPPAG00000028097	TARBP1	99	45.924	ENSPMEG00000017857	si:dkey-85a20.4	83	45.633	Poecilia_mexicana
ENSPPAG00000028097	TARBP1	99	46.260	ENSPREG00000022753	si:dkey-85a20.4	83	45.887	Poecilia_reticulata
ENSPPAG00000028097	TARBP1	89	99.074	ENSPPYG00000000102	TARBP1	83	99.074	Pongo_abelii
ENSPPAG00000028097	TARBP1	82	94.000	ENSPCAG00000004808	TARBP1	70	94.000	Procavia_capensis
ENSPPAG00000028097	TARBP1	99	87.234	ENSPCOG00000005666	TARBP1	84	86.867	Propithecus_coquereli
ENSPPAG00000028097	TARBP1	99	67.886	ENSPVAG00000014798	TARBP1	85	67.298	Pteropus_vampyrus
ENSPPAG00000028097	TARBP1	99	45.368	ENSPNYG00000019135	si:dkey-85a20.4	83	45.401	Pundamilia_nyererei
ENSPPAG00000028097	TARBP1	99	71.870	ENSRNOG00000053574	Tarbp1	86	71.870	Rattus_norvegicus
ENSPPAG00000028097	TARBP1	100	90.689	ENSRBIG00000043362	TARBP1	92	90.689	Rhinopithecus_bieti
ENSPPAG00000028097	TARBP1	100	97.065	ENSRROG00000029527	TARBP1	88	97.065	Rhinopithecus_roxellana
ENSPPAG00000028097	TARBP1	99	95.713	ENSSBOG00000034503	TARBP1	97	95.713	Saimiri_boliviensis_boliviensis
ENSPPAG00000028097	TARBP1	99	75.755	ENSSHAG00000000013	TARBP1	100	75.755	Sarcophilus_harrisii
ENSPPAG00000028097	TARBP1	99	45.893	ENSSFOG00015002660	si:dkey-85a20.4	97	47.116	Scleropages_formosus
ENSPPAG00000028097	TARBP1	99	46.370	ENSSMAG00000007081	si:dkey-85a20.4	82	46.298	Scophthalmus_maximus
ENSPPAG00000028097	TARBP1	99	44.825	ENSSDUG00000023566	si:dkey-85a20.4	83	45.033	Seriola_dumerili
ENSPPAG00000028097	TARBP1	99	46.915	ENSSLDG00000020200	si:dkey-85a20.4	84	46.877	Seriola_lalandi_dorsalis
ENSPPAG00000028097	TARBP1	90	85.714	ENSSARG00000012207	TARBP1	76	85.714	Sorex_araneus
ENSPPAG00000028097	TARBP1	99	68.594	ENSSPUG00000015364	TARBP1	84	68.594	Sphenodon_punctatus
ENSPPAG00000028097	TARBP1	99	46.475	ENSSPAG00000007213	si:dkey-85a20.4	83	46.220	Stegastes_partitus
ENSPPAG00000028097	TARBP1	94	92.090	ENSSSCG00000010160	TARBP1	83	92.090	Sus_scrofa
ENSPPAG00000028097	TARBP1	96	68.602	ENSTGUG00000010214	TARBP1	100	68.602	Taeniopygia_guttata
ENSPPAG00000028097	TARBP1	99	45.171	ENSTNIG00000016586	si:dkey-85a20.4	99	45.098	Tetraodon_nigroviridis
ENSPPAG00000028097	TARBP1	94	83.346	ENSTTRG00000008707	TARBP1	83	83.346	Tursiops_truncatus
ENSPPAG00000028097	TARBP1	97	85.090	ENSUMAG00000006730	TARBP1	99	85.090	Ursus_maritimus
ENSPPAG00000028097	TARBP1	86	91.753	ENSVPAG00000007665	TARBP1	81	91.753	Vicugna_pacos
ENSPPAG00000028097	TARBP1	99	86.437	ENSVVUG00000007460	TARBP1	96	86.144	Vulpes_vulpes
ENSPPAG00000028097	TARBP1	99	56.350	ENSXETG00000016224	tarbp1	99	56.277	Xenopus_tropicalis
ENSPPAG00000028097	TARBP1	90	48.977	ENSXCOG00000011779	si:dkey-85a20.4	90	48.977	Xiphophorus_couchianus
ENSPPAG00000028097	TARBP1	77	43.486	ENSXMAG00000009600	si:dkey-85a20.4	100	43.309	Xiphophorus_maculatus