EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000028138 (Gene tree)
Gene ID: 103786072
Gene Symbol: POLR1D
Alias: -
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 117264 bases
Position: chr13:27256567-27373830
Accession: 103786072
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000009824	RNA_pol_L_2	PF13656.6	4.7e-28	1	1
ENSPPAP00000009824	RNA_pol_L	PF01193.24	8.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000032487	POLR1D-203	141	-	ENSPPAP00000009842	46 (aa)	-	A0A2R8ZZ24
ENSPPAT00000032484	POLR1D-202	2015	XM_003818334	ENSPPAP00000009839	122 (aa)	XP_003818382	A0A2R9A3I0
ENSPPAT00000032468	POLR1D-201	772	XM_008971613	ENSPPAP00000009824	133 (aa)	XP_008969861	A0A2R9A3G6
ENSPPAT00000032490	POLR1D-204	129	-	ENSPPAP00000009845	42 (aa)	-	A0A2R8ZXZ3
ENSPPAT00000032493	POLR1D-205	387	-	ENSPPAP00000009848	128 (aa)	-	A0A2R9A1S2

Gene Model

Click here to download ENSPPAG00000028138's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03020	RNA polymerase	KEGG
pps04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000028138's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000028138	POLR1D	100	98.496	ENSG00000186184	POLR1D	100	98.496	Homo_sapiens
ENSPPAG00000028138	POLR1D	83	66.667	ENSAPOG00000021882	polr1d	98	66.667	Acanthochromis_polyacanthus
ENSPPAG00000028138	POLR1D	94	96.800	ENSAMEG00000019095	POLR1D	100	96.800	Ailuropoda_melanoleuca
ENSPPAG00000028138	POLR1D	75	75.000	ENSACIG00000013328	polr1d	87	75.000	Amphilophus_citrinellus
ENSPPAG00000028138	POLR1D	80	69.159	ENSAOCG00000018500	polr1d	94	69.159	Amphiprion_ocellaris
ENSPPAG00000028138	POLR1D	82	66.972	ENSAPEG00000009489	polr1d	95	66.972	Amphiprion_percula
ENSPPAG00000028138	POLR1D	80	67.290	ENSATEG00000019322	polr1d	94	67.290	Anabas_testudineus
ENSPPAG00000028138	POLR1D	80	67.925	ENSACAG00000015753	POLR1D	91	67.925	Anolis_carolinensis
ENSPPAG00000028138	POLR1D	100	96.992	ENSANAG00000024486	POLR1D	100	96.992	Aotus_nancymaae
ENSPPAG00000028138	POLR1D	77	74.510	ENSACLG00000023805	polr1d	94	71.028	Astatotilapia_calliptera
ENSPPAG00000028138	POLR1D	80	68.868	ENSAMXG00000036118	polr1d	92	68.868	Astyanax_mexicanus
ENSPPAG00000028138	POLR1D	100	93.985	ENSBTAG00000008642	POLR1D	100	93.985	Bos_taurus
ENSPPAG00000028138	POLR1D	100	93.985	ENSBTAG00000033252	-	100	93.985	Bos_taurus
ENSPPAG00000028138	POLR1D	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSPPAG00000028138	POLR1D	100	96.241	ENSCJAG00000044669	POLR1D	100	96.241	Callithrix_jacchus
ENSPPAG00000028138	POLR1D	100	96.992	ENSCAFG00000006755	POLR1D	100	96.992	Canis_familiaris
ENSPPAG00000028138	POLR1D	100	94.737	ENSCHIG00000021910	POLR1D	100	94.737	Capra_hircus
ENSPPAG00000028138	POLR1D	96	83.846	ENSTSYG00000034852	-	98	84.034	Carlito_syrichta
ENSPPAG00000028138	POLR1D	93	92.742	ENSTSYG00000026817	-	93	92.742	Carlito_syrichta
ENSPPAG00000028138	POLR1D	95	55.556	ENSCAPG00000006058	-	97	55.556	Cavia_aperea
ENSPPAG00000028138	POLR1D	95	56.349	ENSCPOG00000030450	-	97	56.349	Cavia_porcellus
ENSPPAG00000028138	POLR1D	100	95.489	ENSCCAG00000021349	-	100	95.489	Cebus_capucinus
ENSPPAG00000028138	POLR1D	100	78.195	ENSCCAG00000020191	-	100	78.195	Cebus_capucinus
ENSPPAG00000028138	POLR1D	100	87.218	ENSCATG00000022900	-	100	87.218	Cercocebus_atys
ENSPPAG00000028138	POLR1D	100	96.992	ENSCATG00000030710	-	100	96.992	Cercocebus_atys
ENSPPAG00000028138	POLR1D	93	95.968	ENSCLAG00000017623	POLR1D	100	95.968	Chinchilla_lanigera
ENSPPAG00000028138	POLR1D	73	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSPPAG00000028138	POLR1D	100	93.985	ENSCANG00000037694	-	100	93.985	Colobus_angolensis_palliatus
ENSPPAG00000028138	POLR1D	100	96.992	ENSCANG00000028632	-	100	96.992	Colobus_angolensis_palliatus
ENSPPAG00000028138	POLR1D	100	96.241	ENSCGRG00001021251	Polr1d	100	96.241	Cricetulus_griseus_chok1gshd
ENSPPAG00000028138	POLR1D	100	96.241	ENSCGRG00000011639	Polr1d	100	96.241	Cricetulus_griseus_crigri
ENSPPAG00000028138	POLR1D	78	70.192	ENSCSEG00000018268	polr1d	96	66.071	Cynoglossus_semilaevis
ENSPPAG00000028138	POLR1D	84	67.857	ENSCVAG00000018527	polr1d	98	67.857	Cyprinodon_variegatus
ENSPPAG00000028138	POLR1D	81	66.667	ENSDARG00000037570	polr1d	96	66.667	Danio_rerio
ENSPPAG00000028138	POLR1D	100	96.241	ENSDNOG00000043676	-	100	96.241	Dasypus_novemcinctus
ENSPPAG00000028138	POLR1D	100	94.030	ENSDNOG00000046247	-	100	94.030	Dasypus_novemcinctus
ENSPPAG00000028138	POLR1D	100	93.985	ENSDORG00000029155	Polr1d	100	93.985	Dipodomys_ordii
ENSPPAG00000028138	POLR1D	65	43.023	FBgn0086447	l(2)37Cg	81	43.023	Drosophila_melanogaster
ENSPPAG00000028138	POLR1D	93	88.710	ENSETEG00000012797	POLR1D	100	88.710	Echinops_telfairi
ENSPPAG00000028138	POLR1D	65	71.264	ENSEBUG00000011748	polr1d	61	71.264	Eptatretus_burgeri
ENSPPAG00000028138	POLR1D	96	97.656	ENSEASG00005022487	POLR1D	99	97.656	Equus_asinus_asinus
ENSPPAG00000028138	POLR1D	93	95.968	ENSEEUG00000013144	POLR1D	100	95.968	Erinaceus_europaeus
ENSPPAG00000028138	POLR1D	80	67.925	ENSELUG00000005105	rpac2	93	67.925	Esox_lucius
ENSPPAG00000028138	POLR1D	100	96.992	ENSFCAG00000030162	POLR1D	100	96.992	Felis_catus
ENSPPAG00000028138	POLR1D	72	76.042	ENSFALG00000011463	POLR1D	95	76.042	Ficedula_albicollis
ENSPPAG00000028138	POLR1D	100	95.489	ENSFDAG00000004463	POLR1D	100	95.489	Fukomys_damarensis
ENSPPAG00000028138	POLR1D	83	71.429	ENSFHEG00000015410	polr1d	97	71.429	Fundulus_heteroclitus
ENSPPAG00000028138	POLR1D	79	72.381	ENSGAFG00000001693	polr1d	92	72.381	Gambusia_affinis
ENSPPAG00000028138	POLR1D	88	66.949	ENSGACG00000018585	polr1d	100	66.949	Gasterosteus_aculeatus
ENSPPAG00000028138	POLR1D	80	78.302	ENSGAGG00000008503	POLR1D	93	78.302	Gopherus_agassizii
ENSPPAG00000028138	POLR1D	100	98.496	ENSGGOG00000004235	POLR1D	100	98.496	Gorilla_gorilla
ENSPPAG00000028138	POLR1D	80	71.028	ENSHBUG00000002111	polr1d	94	71.028	Haplochromis_burtoni
ENSPPAG00000028138	POLR1D	100	93.985	ENSHGLG00000003202	POLR1D	100	93.985	Heterocephalus_glaber_female
ENSPPAG00000028138	POLR1D	100	93.985	ENSHGLG00100009393	POLR1D	100	93.985	Heterocephalus_glaber_male
ENSPPAG00000028138	POLR1D	80	69.159	ENSHCOG00000003258	polr1d	94	69.159	Hippocampus_comes
ENSPPAG00000028138	POLR1D	82	71.560	ENSIPUG00000014810	polr1d	95	71.560	Ictalurus_punctatus
ENSPPAG00000028138	POLR1D	100	97.744	ENSSTOG00000013877	POLR1D	100	97.744	Ictidomys_tridecemlineatus
ENSPPAG00000028138	POLR1D	95	75.397	ENSJJAG00000021667	-	75	75.397	Jaculus_jaculus
ENSPPAG00000028138	POLR1D	97	89.474	ENSJJAG00000022671	-	100	92.500	Jaculus_jaculus
ENSPPAG00000028138	POLR1D	80	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSPPAG00000028138	POLR1D	79	72.381	ENSLBEG00000015919	polr1d	92	72.381	Labrus_bergylta
ENSPPAG00000028138	POLR1D	86	66.087	ENSLACG00000006810	POLR1D	95	66.087	Latimeria_chalumnae
ENSPPAG00000028138	POLR1D	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSPPAG00000028138	POLR1D	100	89.474	ENSLAFG00000032290	POLR1D	100	89.474	Loxodonta_africana
ENSPPAG00000028138	POLR1D	94	96.800	ENSMFAG00000045264	POLR1D	97	96.800	Macaca_fascicularis
ENSPPAG00000028138	POLR1D	100	78.195	ENSMMUG00000041570	-	100	78.195	Macaca_mulatta
ENSPPAG00000028138	POLR1D	87	97.414	ENSMMUG00000020386	POLR1D	100	97.414	Macaca_mulatta
ENSPPAG00000028138	POLR1D	100	81.203	ENSMNEG00000038120	-	100	81.203	Macaca_nemestrina
ENSPPAG00000028138	POLR1D	100	97.744	ENSMNEG00000008630	-	100	97.744	Macaca_nemestrina
ENSPPAG00000028138	POLR1D	100	87.218	ENSMLEG00000032251	-	100	87.218	Mandrillus_leucophaeus
ENSPPAG00000028138	POLR1D	100	97.744	ENSMLEG00000041048	-	100	97.744	Mandrillus_leucophaeus
ENSPPAG00000028138	POLR1D	76	71.287	ENSMAMG00000014834	polr1d	94	71.287	Mastacembelus_armatus
ENSPPAG00000028138	POLR1D	77	74.510	ENSMZEG00005006638	polr1d	90	74.510	Maylandia_zebra
ENSPPAG00000028138	POLR1D	69	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSPPAG00000028138	POLR1D	100	95.489	ENSMAUG00000001946	Polr1d	100	95.489	Mesocricetus_auratus
ENSPPAG00000028138	POLR1D	99	78.788	ENSMICG00000007349	-	100	78.788	Microcebus_murinus
ENSPPAG00000028138	POLR1D	100	95.489	ENSMICG00000016883	-	100	95.489	Microcebus_murinus
ENSPPAG00000028138	POLR1D	99	95.455	ENSMOCG00000021288	Polr1d	99	95.455	Microtus_ochrogaster
ENSPPAG00000028138	POLR1D	80	68.224	ENSMMOG00000009605	polr1d	94	68.224	Mola_mola
ENSPPAG00000028138	POLR1D	80	84.906	ENSMODG00000023881	POLR1D	93	84.906	Monodelphis_domestica
ENSPPAG00000028138	POLR1D	80	67.290	ENSMALG00000010652	polr1d	94	67.290	Monopterus_albus
ENSPPAG00000028138	POLR1D	100	89.474	MGP_CAROLIEiJ_G0028034	Polr1d	100	89.474	Mus_caroli
ENSPPAG00000028138	POLR1D	100	89.474	ENSMUSG00000029642	Polr1d	100	89.474	Mus_musculus
ENSPPAG00000028138	POLR1D	100	88.722	MGP_PahariEiJ_G0024600	Polr1d	100	88.722	Mus_pahari
ENSPPAG00000028138	POLR1D	100	90.226	MGP_SPRETEiJ_G0029032	Polr1d	100	90.226	Mus_spretus
ENSPPAG00000028138	POLR1D	100	94.737	ENSMLUG00000027169	-	100	94.737	Myotis_lucifugus
ENSPPAG00000028138	POLR1D	99	84.848	ENSMLUG00000004118	-	99	84.848	Myotis_lucifugus
ENSPPAG00000028138	POLR1D	87	94.828	ENSNGAG00000006014	Polr1d	100	94.828	Nannospalax_galili
ENSPPAG00000028138	POLR1D	80	71.028	ENSNBRG00000020327	polr1d	94	71.028	Neolamprologus_brichardi
ENSPPAG00000028138	POLR1D	100	98.496	ENSNLEG00000000358	POLR1D	100	98.496	Nomascus_leucogenys
ENSPPAG00000028138	POLR1D	100	80.451	ENSODEG00000014801	-	100	80.451	Octodon_degus
ENSPPAG00000028138	POLR1D	100	94.737	ENSODEG00000005294	-	100	94.737	Octodon_degus
ENSPPAG00000028138	POLR1D	79	81.905	ENSOANG00000008708	-	97	81.905	Ornithorhynchus_anatinus
ENSPPAG00000028138	POLR1D	100	94.737	ENSOCUG00000015706	POLR1D	82	94.737	Oryctolagus_cuniculus
ENSPPAG00000028138	POLR1D	84	66.071	ENSORLG00000010257	polr1d	98	66.071	Oryzias_latipes
ENSPPAG00000028138	POLR1D	88	64.103	ENSORLG00020000533	polr1d	79	64.103	Oryzias_latipes_hni
ENSPPAG00000028138	POLR1D	89	64.706	ENSORLG00015013267	polr1d	79	64.706	Oryzias_latipes_hsok
ENSPPAG00000028138	POLR1D	86	66.957	ENSOMEG00000014912	polr1d	77	66.957	Oryzias_melastigma
ENSPPAG00000028138	POLR1D	100	95.489	ENSOGAG00000014601	POLR1D	100	95.489	Otolemur_garnettii
ENSPPAG00000028138	POLR1D	94	94.400	ENSOARG00000017005	POLR1D	96	94.400	Ovis_aries
ENSPPAG00000028138	POLR1D	99	96.970	ENSPPRG00000003381	POLR1D	99	96.970	Panthera_pardus
ENSPPAG00000028138	POLR1D	93	96.774	ENSPTIG00000018137	POLR1D	93	96.774	Panthera_tigris_altaica
ENSPPAG00000028138	POLR1D	100	98.496	ENSPTRG00000005734	POLR1D	100	98.496	Pan_troglodytes
ENSPPAG00000028138	POLR1D	100	86.466	ENSPANG00000035051	-	100	86.466	Papio_anubis
ENSPPAG00000028138	POLR1D	100	97.744	ENSPANG00000020259	-	100	97.744	Papio_anubis
ENSPPAG00000028138	POLR1D	86	62.609	ENSPKIG00000021891	polr1d	90	52.632	Paramormyrops_kingsleyae
ENSPPAG00000028138	POLR1D	83	75.000	ENSPSIG00000011822	POLR1D	87	75.000	Pelodiscus_sinensis
ENSPPAG00000028138	POLR1D	84	66.071	ENSPMGG00000010359	polr1d	97	66.071	Periophthalmus_magnuspinnatus
ENSPPAG00000028138	POLR1D	93	56.800	ENSPMGG00000012998	POLR1D	93	56.800	Periophthalmus_magnuspinnatus
ENSPPAG00000028138	POLR1D	100	92.481	ENSPEMG00000006336	-	100	92.481	Peromyscus_maniculatus_bairdii
ENSPPAG00000028138	POLR1D	81	60.185	ENSPMAG00000004228	polr1d	91	60.185	Petromyzon_marinus
ENSPPAG00000028138	POLR1D	80	84.906	ENSPCIG00000001673	POLR1D	93	84.906	Phascolarctos_cinereus
ENSPPAG00000028138	POLR1D	79	72.381	ENSPFOG00000023343	polr1d	92	73.750	Poecilia_formosa
ENSPPAG00000028138	POLR1D	79	72.381	ENSPLAG00000009675	polr1d	92	72.381	Poecilia_latipinna
ENSPPAG00000028138	POLR1D	79	72.381	ENSPMEG00000004628	polr1d	92	72.381	Poecilia_mexicana
ENSPPAG00000028138	POLR1D	79	72.381	ENSPREG00000022032	polr1d	92	72.381	Poecilia_reticulata
ENSPPAG00000028138	POLR1D	100	95.489	ENSPCOG00000028175	POLR1D	100	95.489	Propithecus_coquereli
ENSPPAG00000028138	POLR1D	80	71.028	ENSPNYG00000000107	polr1d	94	71.028	Pundamilia_nyererei
ENSPPAG00000028138	POLR1D	76	68.317	ENSPNAG00000001512	polr1d	87	67.308	Pygocentrus_nattereri
ENSPPAG00000028138	POLR1D	100	93.985	ENSRBIG00000000336	-	100	93.985	Rhinopithecus_bieti
ENSPPAG00000028138	POLR1D	100	97.744	ENSRBIG00000036378	-	100	97.744	Rhinopithecus_bieti
ENSPPAG00000028138	POLR1D	100	97.744	ENSRROG00000042232	-	100	97.744	Rhinopithecus_roxellana
ENSPPAG00000028138	POLR1D	100	93.985	ENSRROG00000026751	-	100	93.985	Rhinopithecus_roxellana
ENSPPAG00000028138	POLR1D	89	45.378	YNL113W	RPC19	84	45.378	Saccharomyces_cerevisiae
ENSPPAG00000028138	POLR1D	86	92.105	ENSSBOG00000030146	-	84	92.105	Saimiri_boliviensis_boliviensis
ENSPPAG00000028138	POLR1D	100	96.992	ENSSBOG00000028482	-	100	96.992	Saimiri_boliviensis_boliviensis
ENSPPAG00000028138	POLR1D	86	78.070	ENSSHAG00000001190	POLR1D	88	78.070	Sarcophilus_harrisii
ENSPPAG00000028138	POLR1D	81	74.074	ENSSFOG00015011375	polr1d	95	74.074	Scleropages_formosus
ENSPPAG00000028138	POLR1D	80	68.224	ENSSMAG00000011861	polr1d	94	68.224	Scophthalmus_maximus
ENSPPAG00000028138	POLR1D	80	67.290	ENSSDUG00000011930	polr1d	94	67.290	Seriola_dumerili
ENSPPAG00000028138	POLR1D	86	62.609	ENSSLDG00000023871	polr1d	97	62.609	Seriola_lalandi_dorsalis
ENSPPAG00000028138	POLR1D	100	95.489	ENSSARG00000007840	POLR1D	100	95.489	Sorex_araneus
ENSPPAG00000028138	POLR1D	75	78.000	ENSSPUG00000005786	POLR1D	91	74.528	Sphenodon_punctatus
ENSPPAG00000028138	POLR1D	82	69.725	ENSSPAG00000011764	polr1d	96	69.725	Stegastes_partitus
ENSPPAG00000028138	POLR1D	100	93.985	ENSSSCG00000009310	POLR1D	100	93.985	Sus_scrofa
ENSPPAG00000028138	POLR1D	72	76.042	ENSTGUG00000005450	POLR1D	100	76.042	Taeniopygia_guttata
ENSPPAG00000028138	POLR1D	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSPPAG00000028138	POLR1D	93	94.355	ENSTBEG00000007006	POLR1D	100	94.355	Tupaia_belangeri
ENSPPAG00000028138	POLR1D	100	96.992	ENSUAMG00000011413	POLR1D	100	96.992	Ursus_americanus
ENSPPAG00000028138	POLR1D	93	96.774	ENSUMAG00000016968	POLR1D	97	96.774	Ursus_maritimus
ENSPPAG00000028138	POLR1D	100	96.992	ENSVVUG00000009216	POLR1D	100	96.992	Vulpes_vulpes
ENSPPAG00000028138	POLR1D	74	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSPPAG00000028138	POLR1D	74	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus