EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000028218 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 10597 bases
Position: chr22:37750641-37761237
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000009967	APOBEC_N	PF08210.11	5.1e-92	1	2
ENSPPAP00000009967	APOBEC_N	PF08210.11	5.1e-92	2	2
ENSPPAP00000009970	APOBEC_N	PF08210.11	5e-55	1	1
ENSPPAP00000009967	APOBEC_C	PF05240.14	1.3e-64	1	2
ENSPPAP00000009967	APOBEC_C	PF05240.14	1.3e-64	2	2
ENSPPAP00000009970	APOBEC_C	PF05240.14	8.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000032618	-	573	-	ENSPPAP00000009970	190 (aa)	-	A0A2R9A3W2
ENSPPAT00000032614	-	966	-	ENSPPAP00000009967	321 (aa)	-	A0A2R8ZYD2

Gene Model

Click here to download ENSPPAG00000028218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000028218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000028218	-	89	34.356	ENSPPAG00000036522	APOBEC3H	99	33.582
ENSPPAG00000028218	-	95	51.538	ENSPPAG00000033277	-	76	51.538
ENSPPAG00000028218	-	94	41.899	ENSPPAG00000038169	AICDA	93	42.647
ENSPPAG00000028218	-	98	52.469	ENSPPAG00000009288	APOBEC3B	98	52.469
ENSPPAG00000028218	-	90	33.028	ENSPPAG00000035598	APOBEC2	85	33.594
ENSPPAG00000028218	-	100	78.421	ENSPPAG00000014118	APOBEC3C	100	78.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000028218	-	100	77.368	ENSG00000244509	APOBEC3C	100	77.368	Homo_sapiens
ENSPPAG00000028218	-	100	84.409	ENSG00000128394	APOBEC3F	100	84.409	Homo_sapiens
ENSPPAG00000028218	-	100	90.526	ENSG00000243811	APOBEC3D	100	90.526	Homo_sapiens
ENSPPAG00000028218	-	100	65.789	ENSANAG00000030088	-	98	66.139	Aotus_nancymaae
ENSPPAG00000028218	-	80	65.909	ENSCJAG00000015317	-	100	65.909	Callithrix_jacchus
ENSPPAG00000028218	-	98	47.594	ENSCAFG00020002615	-	99	47.368	Canis_lupus_dingo
ENSPPAG00000028218	-	96	54.762	ENSTSYG00000030036	-	99	54.762	Carlito_syrichta
ENSPPAG00000028218	-	100	51.852	ENSTSYG00000034260	-	97	51.852	Carlito_syrichta
ENSPPAG00000028218	-	96	53.552	ENSTSYG00000028254	-	99	53.552	Carlito_syrichta
ENSPPAG00000028218	-	98	63.441	ENSCCAG00000030932	-	90	60.500	Cebus_capucinus
ENSPPAG00000028218	-	100	72.727	ENSCATG00000033502	-	99	74.684	Cercocebus_atys
ENSPPAG00000028218	-	100	73.158	ENSCATG00000043226	APOBEC3C	100	73.158	Cercocebus_atys
ENSPPAG00000028218	-	100	74.211	ENSCSAG00000006402	APOBEC3C	100	74.211	Chlorocebus_sabaeus
ENSPPAG00000028218	-	100	76.882	ENSCSAG00000006382	APOBEC3F	100	76.882	Chlorocebus_sabaeus
ENSPPAG00000028218	-	100	73.684	ENSCANG00000039177	APOBEC3C	100	73.684	Colobus_angolensis_palliatus
ENSPPAG00000028218	-	100	74.731	ENSCANG00000033269	-	100	74.731	Colobus_angolensis_palliatus
ENSPPAG00000028218	-	100	75.269	ENSCANG00000031957	-	100	75.269	Colobus_angolensis_palliatus
ENSPPAG00000028218	-	100	78.495	ENSCANG00000032904	-	100	78.495	Colobus_angolensis_palliatus
ENSPPAG00000028218	-	97	39.683	ENSDNOG00000044642	-	99	39.362	Dasypus_novemcinctus
ENSPPAG00000028218	-	100	46.078	ENSEASG00005018641	-	100	46.078	Equus_asinus_asinus
ENSPPAG00000028218	-	99	48.387	ENSECAG00000006071	-	100	47.742	Equus_caballus
ENSPPAG00000028218	-	100	84.946	ENSGGOG00000038678	APOBEC3F	100	84.946	Gorilla_gorilla
ENSPPAG00000028218	-	100	83.158	ENSGGOG00000036587	-	100	83.158	Gorilla_gorilla
ENSPPAG00000028218	-	98	44.149	ENSHGLG00000017315	-	92	44.086	Heterocephalus_glaber_female
ENSPPAG00000028218	-	98	44.149	ENSHGLG00100003105	-	94	44.149	Heterocephalus_glaber_male
ENSPPAG00000028218	-	100	71.579	ENSMFAG00000016792	APOBEC3C	100	71.579	Macaca_fascicularis
ENSPPAG00000028218	-	100	73.656	ENSMFAG00000004037	APOBEC3F	100	75.000	Macaca_fascicularis
ENSPPAG00000028218	-	98	76.899	ENSMFAG00000002331	-	99	76.899	Macaca_fascicularis
ENSPPAG00000028218	-	100	75.269	ENSMMUG00000004017	APOBEC3F	99	77.215	Macaca_mulatta
ENSPPAG00000028218	-	97	71.739	ENSMMUG00000004018	APOBEC3C	95	71.739	Macaca_mulatta
ENSPPAG00000028218	-	98	77.848	ENSMNEG00000043316	APOBEC3D	99	77.848	Macaca_nemestrina
ENSPPAG00000028218	-	100	72.632	ENSMNEG00000045196	APOBEC3C	100	72.632	Macaca_nemestrina
ENSPPAG00000028218	-	100	73.158	ENSMLEG00000036992	APOBEC3C	100	73.158	Mandrillus_leucophaeus
ENSPPAG00000028218	-	100	75.269	ENSMLEG00000029642	APOBEC3F	100	76.582	Mandrillus_leucophaeus
ENSPPAG00000028218	-	99	53.191	ENSMICG00000042615	-	89	53.191	Microcebus_murinus
ENSPPAG00000028218	-	97	45.026	ENSMLUG00000023676	-	99	45.026	Myotis_lucifugus
ENSPPAG00000028218	-	99	73.899	ENSNLEG00000035811	-	99	73.899	Nomascus_leucogenys
ENSPPAG00000028218	-	100	73.158	ENSNLEG00000028392	APOBEC3C	100	73.158	Nomascus_leucogenys
ENSPPAG00000028218	-	98	44.920	ENSOGAG00000030300	-	99	44.149	Otolemur_garnettii
ENSPPAG00000028218	-	98	46.369	ENSOGAG00000033404	-	100	46.369	Otolemur_garnettii
ENSPPAG00000028218	-	98	47.312	ENSOGAG00000032498	-	99	47.312	Otolemur_garnettii
ENSPPAG00000028218	-	97	48.387	ENSPPRG00000003726	-	98	48.387	Panthera_pardus
ENSPPAG00000028218	-	100	99.474	ENSPTRG00000041588	APOBEC3D	100	99.474	Pan_troglodytes
ENSPPAG00000028218	-	100	83.871	ENSPTRG00000014385	APOBEC3C	100	83.871	Pan_troglodytes
ENSPPAG00000028218	-	100	75.269	ENSPANG00000010775	APOBEC3F	100	75.949	Papio_anubis
ENSPPAG00000028218	-	100	76.842	ENSPPYG00000011832	APOBEC3C	100	76.842	Pongo_abelii
ENSPPAG00000028218	-	78	56.349	ENSPCOG00000018072	-	95	56.349	Propithecus_coquereli
ENSPPAG00000028218	-	79	55.814	ENSPCOG00000022067	-	98	55.814	Propithecus_coquereli
ENSPPAG00000028218	-	93	44.715	ENSPVAG00000009461	-	71	44.715	Pteropus_vampyrus
ENSPPAG00000028218	-	100	77.957	ENSRBIG00000030834	-	100	77.957	Rhinopithecus_bieti
ENSPPAG00000028218	-	98	77.957	ENSRBIG00000030323	-	100	77.957	Rhinopithecus_bieti
ENSPPAG00000028218	-	100	76.111	ENSRBIG00000042297	-	100	76.111	Rhinopithecus_bieti
ENSPPAG00000028218	-	100	76.882	ENSRROG00000028557	-	100	76.882	Rhinopithecus_roxellana
ENSPPAG00000028218	-	100	76.111	ENSRROG00000029996	-	100	76.111	Rhinopithecus_roxellana
ENSPPAG00000028218	-	100	76.344	ENSRROG00000029045	APOBEC3C	100	76.582	Rhinopithecus_roxellana
ENSPPAG00000028218	-	100	65.263	ENSSBOG00000032780	-	100	65.263	Saimiri_boliviensis_boliviensis
ENSPPAG00000028218	-	96	46.154	ENSUAMG00000004433	-	100	46.602	Ursus_americanus
ENSPPAG00000028218	-	97	47.027	ENSUMAG00000014441	-	86	47.027	Ursus_maritimus
ENSPPAG00000028218	-	77	51.333	ENSVVUG00000014628	-	94	48.649	Vulpes_vulpes