EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000028255 (Gene tree)
Gene ID: 100988353
Gene Symbol: -
Alias: -
Full Name: septin-4
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 23787 bases
Position: chr17:57448904-57472690
Accession: 100988353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000010128	MMR_HSR1	PF01926.23	4.6e-07	1	1
ENSPPAP00000010062	MMR_HSR1	PF01926.23	6.3e-07	1	1
ENSPPAP00000010113	MMR_HSR1	PF01926.23	1e-06	1	1
ENSPPAP00000010100	MMR_HSR1	PF01926.23	1e-06	1	1
ENSPPAP00000010110	MMR_HSR1	PF01926.23	1.1e-06	1	1
ENSPPAP00000010059	MMR_HSR1	PF01926.23	1.1e-06	1	1
ENSPPAP00000010103	MMR_HSR1	PF01926.23	1.2e-06	1	1
ENSPPAP00000010095	MMR_HSR1	PF01926.23	4.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000032775	-	903	-	ENSPPAP00000010128	300 (aa)	-	A0A2R8ZZV9
ENSPPAT00000032750	-	1482	-	ENSPPAP00000010103	493 (aa)	-	A0A2R8ZZT5
ENSPPAT00000032742	-	3039	XM_003817377	ENSPPAP00000010095	1012 (aa)	XP_003817425	A0A2R9A487
ENSPPAT00000032760	-	1380	-	ENSPPAP00000010113	459 (aa)	-	A0A2R8ZZU4
ENSPPAT00000032757	-	1416	-	ENSPPAP00000010110	471 (aa)	-	A0A2R9A499
ENSPPAT00000032747	-	1413	-	ENSPPAP00000010100	470 (aa)	-	A0A2R9A492
ENSPPAT00000032706	-	1895	XM_003817375	ENSPPAP00000010059	478 (aa)	XP_003817423	A0A2R9A2N3
ENSPPAT00000032709	-	1722	XM_008970560	ENSPPAP00000010062	379 (aa)	XP_008968808	A0A2R8ZYM4

Gene Model

Click here to download ENSPPAG00000028255's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps04210	Apoptosis	KEGG
pps04215	Apoptosis - multiple species	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000028255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000028255	-	92	56.286	ENSPPAG00000032680	SEPT1	84	55.866
ENSPPAG00000028255	-	93	82.796	ENSPPAG00000042516	-	99	74.670
ENSPPAG00000028255	-	93	44.128	ENSPPAG00000040865	SEPT6	68	44.407
ENSPPAG00000028255	-	93	59.498	ENSPPAG00000041263	SEPT7	88	52.116
ENSPPAG00000028255	-	93	43.571	ENSPPAG00000018901	SEPT8	71	43.042
ENSPPAG00000028255	-	91	52.727	ENSPPAG00000013116	SEPT3	89	52.453
ENSPPAG00000028255	-	97	64.948	ENSPPAG00000034127	SEPT2	95	57.143
ENSPPAG00000028255	-	91	50.000	ENSPPAG00000034953	SEPT9	92	48.065
ENSPPAG00000028255	-	93	43.571	ENSPPAG00000041700	SEPT11	67	43.878
ENSPPAG00000028255	-	93	43.060	ENSPPAG00000024063	SEPT14	76	43.051
ENSPPAG00000028255	-	91	46.886	ENSPPAG00000033910	SEPT12	97	41.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000028255	-	98	97.270	ENSCAFG00000017532	SEPT4	99	97.772	Canis_familiaris
ENSPPAG00000028255	-	100	99.736	ENSCATG00000032851	-	100	99.736	Cercocebus_atys
ENSPPAG00000028255	-	100	97.098	ENSECAG00000020248	-	100	97.098	Equus_caballus
ENSPPAG00000028255	-	100	100.000	ENSGGOG00000013814	-	100	100.000	Gorilla_gorilla
ENSPPAG00000028255	-	100	99.736	ENSMFAG00000038431	SEPT4	100	99.736	Macaca_fascicularis
ENSPPAG00000028255	-	100	99.736	ENSMMUG00000008423	-	100	99.736	Macaca_mulatta
ENSPPAG00000028255	-	100	99.736	ENSMNEG00000036497	-	100	99.736	Macaca_nemestrina
ENSPPAG00000028255	-	100	99.736	ENSMLEG00000026740	-	100	99.736	Mandrillus_leucophaeus
ENSPPAG00000028255	-	98	97.270	ENSMPUG00000015285	-	100	74.853	Mustela_putorius_furo
ENSPPAG00000028255	-	100	99.736	ENSNLEG00000008245	-	100	99.736	Nomascus_leucogenys
ENSPPAG00000028255	-	96	97.917	ENSOARG00000010822	-	100	72.217	Ovis_aries
ENSPPAG00000028255	-	100	100.000	ENSPTRG00000009455	SEPT4	100	100.000	Pan_troglodytes