EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000028379 (Gene tree)
Gene ID: 100989104
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 98525 bases
Position: chr16:24966474-25064998
Accession: 100989104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000010315	Ago_hook	PF10427.9	5.3e-19	1	1
ENSPPAP00000010320	Ago_hook	PF10427.9	5.4e-19	1	1
ENSPPAP00000010322	Ago_hook	PF10427.9	9.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000032965	TNRC6A-201	6777	XM_014341713	ENSPPAP00000010315	1916 (aa)	XP_014197199	A0A2R9A4V3
ENSPPAT00000032972	TNRC6A-203	5811	-	ENSPPAP00000010322	1936 (aa)	-	A0A2R8ZZB5
ENSPPAT00000032970	TNRC6A-202	8365	XM_003813694	ENSPPAP00000010320	1965 (aa)	XP_003813742	A0A2R9A4V8

Gene Model

Click here to download ENSPPAG00000028379's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000028379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000028379	TNRC6A	97	50.000	ENSPPAG00000027160	TNRC6C	98	44.345
ENSPPAG00000028379	TNRC6A	97	40.761	ENSPPAG00000028514	TNRC6B	93	44.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000028379	TNRC6A	100	99.542	ENSG00000090905	TNRC6A	99	99.542	Homo_sapiens
ENSPPAG00000028379	TNRC6A	99	96.092	ENSAMEG00000009333	TNRC6A	100	96.354	Ailuropoda_melanoleuca
ENSPPAG00000028379	TNRC6A	99	81.662	ENSAPLG00000009978	TNRC6A	100	81.662	Anas_platyrhynchos
ENSPPAG00000028379	TNRC6A	99	54.414	ENSACAG00000011857	TNRC6A	99	56.393	Anolis_carolinensis
ENSPPAG00000028379	TNRC6A	100	98.473	ENSANAG00000025252	TNRC6A	99	98.473	Aotus_nancymaae
ENSPPAG00000028379	TNRC6A	92	56.311	ENSAMXG00000019919	tnrc6a	99	56.876	Astyanax_mexicanus
ENSPPAG00000028379	TNRC6A	100	95.357	ENSBTAG00000017999	TNRC6A	99	95.357	Bos_taurus
ENSPPAG00000028379	TNRC6A	100	98.730	ENSCJAG00000020677	TNRC6A	99	98.730	Callithrix_jacchus
ENSPPAG00000028379	TNRC6A	100	95.986	ENSCAFG00000017531	TNRC6A	100	95.882	Canis_familiaris
ENSPPAG00000028379	TNRC6A	99	94.773	ENSCAFG00020021160	TNRC6A	99	94.825	Canis_lupus_dingo
ENSPPAG00000028379	TNRC6A	100	94.885	ENSCHIG00000019448	TNRC6A	99	95.282	Capra_hircus
ENSPPAG00000028379	TNRC6A	100	96.590	ENSTSYG00000012711	TNRC6A	99	96.590	Carlito_syrichta
ENSPPAG00000028379	TNRC6A	100	95.825	ENSCPOG00000036684	TNRC6A	100	95.825	Cavia_porcellus
ENSPPAG00000028379	TNRC6A	100	98.779	ENSCCAG00000033664	TNRC6A	99	98.779	Cebus_capucinus
ENSPPAG00000028379	TNRC6A	99	98.949	ENSCATG00000019284	TNRC6A	99	98.949	Cercocebus_atys
ENSPPAG00000028379	TNRC6A	100	91.649	ENSCLAG00000010217	TNRC6A	99	91.493	Chinchilla_lanigera
ENSPPAG00000028379	TNRC6A	100	98.830	ENSCSAG00000006561	TNRC6A	99	98.830	Chlorocebus_sabaeus
ENSPPAG00000028379	TNRC6A	95	91.695	ENSCHOG00000009374	TNRC6A	94	91.695	Choloepus_hoffmanni
ENSPPAG00000028379	TNRC6A	90	82.390	ENSCPBG00000001881	TNRC6A	99	82.390	Chrysemys_picta_bellii
ENSPPAG00000028379	TNRC6A	100	98.779	ENSCANG00000041549	TNRC6A	99	98.728	Colobus_angolensis_palliatus
ENSPPAG00000028379	TNRC6A	100	94.471	ENSCGRG00001015021	Tnrc6a	100	93.965	Cricetulus_griseus_chok1gshd
ENSPPAG00000028379	TNRC6A	100	93.532	ENSCGRG00000013351	Tnrc6a	99	93.166	Cricetulus_griseus_crigri
ENSPPAG00000028379	TNRC6A	92	56.474	ENSDARG00000079688	tnrc6a	99	57.071	Danio_rerio
ENSPPAG00000028379	TNRC6A	99	93.035	ENSDNOG00000013989	TNRC6A	99	93.295	Dasypus_novemcinctus
ENSPPAG00000028379	TNRC6A	99	85.096	ENSETEG00000014658	TNRC6A	99	85.149	Echinops_telfairi
ENSPPAG00000028379	TNRC6A	100	96.287	ENSEASG00005017693	TNRC6A	99	96.887	Equus_asinus_asinus
ENSPPAG00000028379	TNRC6A	100	96.287	ENSECAG00000025056	TNRC6A	100	96.291	Equus_caballus
ENSPPAG00000028379	TNRC6A	99	89.062	ENSEEUG00000004530	TNRC6A	99	89.010	Erinaceus_europaeus
ENSPPAG00000028379	TNRC6A	100	94.809	ENSFCAG00000025236	TNRC6A	99	94.707	Felis_catus
ENSPPAG00000028379	TNRC6A	100	78.826	ENSFALG00000003757	TNRC6A	99	79.618	Ficedula_albicollis
ENSPPAG00000028379	TNRC6A	92	80.381	ENSGALG00000006068	TNRC6A	99	82.767	Gallus_gallus
ENSPPAG00000028379	TNRC6A	90	81.599	ENSGAGG00000023209	TNRC6A	99	81.886	Gopherus_agassizii
ENSPPAG00000028379	TNRC6A	100	98.969	ENSGGOG00000005137	TNRC6A	100	98.969	Gorilla_gorilla
ENSPPAG00000028379	TNRC6A	99	93.933	ENSHGLG00000012474	-	100	93.724	Heterocephalus_glaber_female
ENSPPAG00000028379	TNRC6A	100	72.248	ENSHGLG00000007368	-	99	71.883	Heterocephalus_glaber_female
ENSPPAG00000028379	TNRC6A	99	93.201	ENSHGLG00100012496	-	100	93.149	Heterocephalus_glaber_male
ENSPPAG00000028379	TNRC6A	100	96.641	ENSSTOG00000023394	TNRC6A	99	96.641	Ictidomys_tridecemlineatus
ENSPPAG00000028379	TNRC6A	99	69.306	ENSLACG00000006277	TNRC6A	100	69.974	Latimeria_chalumnae
ENSPPAG00000028379	TNRC6A	100	83.002	ENSLOCG00000005517	tnrc6a	93	83.002	Lepisosteus_oculatus
ENSPPAG00000028379	TNRC6A	98	94.177	ENSLAFG00000004209	TNRC6A	99	94.281	Loxodonta_africana
ENSPPAG00000028379	TNRC6A	99	97.212	ENSMFAG00000003824	TNRC6A	99	97.867	Macaca_fascicularis
ENSPPAG00000028379	TNRC6A	100	98.983	ENSMMUG00000020428	TNRC6A	99	98.983	Macaca_mulatta
ENSPPAG00000028379	TNRC6A	100	98.881	ENSMNEG00000034854	TNRC6A	99	98.881	Macaca_nemestrina
ENSPPAG00000028379	TNRC6A	99	96.115	ENSMLEG00000042737	TNRC6A	98	96.115	Mandrillus_leucophaeus
ENSPPAG00000028379	TNRC6A	100	79.667	ENSMGAG00000006455	TNRC6A	99	80.272	Meleagris_gallopavo
ENSPPAG00000028379	TNRC6A	100	94.158	ENSMAUG00000012750	Tnrc6a	99	94.158	Mesocricetus_auratus
ENSPPAG00000028379	TNRC6A	100	97.812	ENSMICG00000030685	TNRC6A	99	97.846	Microcebus_murinus
ENSPPAG00000028379	TNRC6A	100	94.676	ENSMOCG00000000152	Tnrc6a	99	94.415	Microtus_ochrogaster
ENSPPAG00000028379	TNRC6A	100	80.455	ENSMODG00000016348	TNRC6A	99	81.593	Monodelphis_domestica
ENSPPAG00000028379	TNRC6A	99	92.951	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.568	Mus_caroli
ENSPPAG00000028379	TNRC6A	100	93.633	ENSMUSG00000052707	Tnrc6a	99	94.925	Mus_musculus
ENSPPAG00000028379	TNRC6A	99	93.796	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.211	Mus_pahari
ENSPPAG00000028379	TNRC6A	100	93.690	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.925	Mus_spretus
ENSPPAG00000028379	TNRC6A	97	83.788	ENSMPUG00000012324	TNRC6A	100	83.681	Mustela_putorius_furo
ENSPPAG00000028379	TNRC6A	99	92.473	ENSMLUG00000002701	TNRC6A	100	92.420	Myotis_lucifugus
ENSPPAG00000028379	TNRC6A	100	95.357	ENSNGAG00000020702	Tnrc6a	100	95.305	Nannospalax_galili
ENSPPAG00000028379	TNRC6A	99	96.491	ENSNLEG00000011851	TNRC6A	99	96.762	Nomascus_leucogenys
ENSPPAG00000028379	TNRC6A	78	89.369	ENSMEUG00000015959	-	77	89.369	Notamacropus_eugenii
ENSPPAG00000028379	TNRC6A	96	98.881	ENSOPRG00000005819	TNRC6A	96	98.881	Ochotona_princeps
ENSPPAG00000028379	TNRC6A	99	89.427	ENSODEG00000012802	TNRC6A	99	89.216	Octodon_degus
ENSPPAG00000028379	TNRC6A	88	83.140	ENSOANG00000007672	TNRC6A	99	83.139	Ornithorhynchus_anatinus
ENSPPAG00000028379	TNRC6A	99	92.738	ENSOCUG00000004325	TNRC6A	100	92.685	Oryctolagus_cuniculus
ENSPPAG00000028379	TNRC6A	99	96.670	ENSOGAG00000006666	TNRC6A	100	96.670	Otolemur_garnettii
ENSPPAG00000028379	TNRC6A	99	94.124	ENSOARG00000017950	TNRC6A	98	96.040	Ovis_aries
ENSPPAG00000028379	TNRC6A	100	94.809	ENSPPRG00000005861	TNRC6A	99	94.707	Panthera_pardus
ENSPPAG00000028379	TNRC6A	100	94.249	ENSPTIG00000006346	TNRC6A	99	94.300	Panthera_tigris_altaica
ENSPPAG00000028379	TNRC6A	100	99.742	ENSPTRG00000007898	TNRC6A	100	99.742	Pan_troglodytes
ENSPPAG00000028379	TNRC6A	100	96.643	ENSPANG00000018523	TNRC6A	99	96.643	Papio_anubis
ENSPPAG00000028379	TNRC6A	88	75.862	ENSPKIG00000012859	tnrc6a	96	79.459	Paramormyrops_kingsleyae
ENSPPAG00000028379	TNRC6A	76	77.635	ENSPSIG00000003965	TNRC6A	100	77.635	Pelodiscus_sinensis
ENSPPAG00000028379	TNRC6A	100	94.520	ENSPEMG00000016318	Tnrc6a	100	94.259	Peromyscus_maniculatus_bairdii
ENSPPAG00000028379	TNRC6A	99	83.368	ENSPCIG00000012106	TNRC6A	100	83.490	Phascolarctos_cinereus
ENSPPAG00000028379	TNRC6A	100	98.728	ENSPPYG00000007202	TNRC6A	100	98.728	Pongo_abelii
ENSPPAG00000028379	TNRC6A	95	98.969	ENSPCAG00000008260	TNRC6A	94	98.969	Procavia_capensis
ENSPPAG00000028379	TNRC6A	100	95.522	ENSPCOG00000010134	TNRC6A	99	95.522	Propithecus_coquereli
ENSPPAG00000028379	TNRC6A	89	70.924	ENSPVAG00000012066	TNRC6A	99	70.753	Pteropus_vampyrus
ENSPPAG00000028379	TNRC6A	100	94.366	ENSRNOG00000024737	Tnrc6a	99	94.158	Rattus_norvegicus
ENSPPAG00000028379	TNRC6A	99	98.763	ENSRBIG00000014222	TNRC6A	100	98.763	Rhinopithecus_bieti
ENSPPAG00000028379	TNRC6A	100	98.524	ENSRROG00000032360	TNRC6A	99	98.626	Rhinopithecus_roxellana
ENSPPAG00000028379	TNRC6A	99	97.495	ENSSBOG00000036197	TNRC6A	100	99.298	Saimiri_boliviensis_boliviensis
ENSPPAG00000028379	TNRC6A	90	83.704	ENSSHAG00000008811	TNRC6A	99	84.160	Sarcophilus_harrisii
ENSPPAG00000028379	TNRC6A	88	67.066	ENSSFOG00015008920	tnrc6a	99	63.609	Scleropages_formosus
ENSPPAG00000028379	TNRC6A	73	83.877	ENSSARG00000002479	TNRC6A	89	83.152	Sorex_araneus
ENSPPAG00000028379	TNRC6A	91	78.835	ENSSPUG00000010525	TNRC6A	100	78.835	Sphenodon_punctatus
ENSPPAG00000028379	TNRC6A	100	96.555	ENSSSCG00000038870	TNRC6A	100	97.718	Sus_scrofa
ENSPPAG00000028379	TNRC6A	100	79.502	ENSTGUG00000006142	TNRC6A	99	79.917	Taeniopygia_guttata
ENSPPAG00000028379	TNRC6A	99	94.268	ENSTBEG00000014965	TNRC6A	100	94.531	Tupaia_belangeri
ENSPPAG00000028379	TNRC6A	94	98.058	ENSTTRG00000002008	TNRC6A	93	98.058	Tursiops_truncatus
ENSPPAG00000028379	TNRC6A	79	95.437	ENSUAMG00000006656	-	93	95.437	Ursus_americanus
ENSPPAG00000028379	TNRC6A	99	95.725	ENSUMAG00000008274	TNRC6A	100	97.289	Ursus_maritimus
ENSPPAG00000028379	TNRC6A	57	85.493	ENSVPAG00000010764	-	57	85.493	Vicugna_pacos
ENSPPAG00000028379	TNRC6A	99	96.006	ENSVVUG00000005380	TNRC6A	100	95.986	Vulpes_vulpes
ENSPPAG00000028379	TNRC6A	95	65.717	ENSXETG00000030437	TNRC6A	99	65.965	Xenopus_tropicalis