EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000028435 (Gene tree)
Gene ID: 100977458
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 4705 bases
Position: chr1:132967363-132972067
Accession: 100977458
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000010418	MMR_HSR1	PF01926.23	0.0002	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000033071	-	372	-	ENSPPAP00000010421	123 (aa)	-	A0A2R8ZZK8
ENSPPAT00000033068	-	1194	XM_003817127	ENSPPAP00000010418	203 (aa)	XP_003817175	A0A2R9A0Q3

Gene Model

Click here to download ENSPPAG00000028435's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000028435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000028435	-	87	42.781	ENSPPAG00000038245	RAB33A	79	42.781
ENSPPAG00000028435	-	95	40.000	ENSPPAG00000041763	RAB5A	89	40.000
ENSPPAG00000028435	-	91	36.702	ENSPPAG00000030833	RAB22A	97	36.702
ENSPPAG00000028435	-	79	39.506	ENSPPAG00000028620	HRAS	85	39.506
ENSPPAG00000028435	-	91	42.424	ENSPPAG00000028589	-	91	42.424
ENSPPAG00000028435	-	55	57.143	ENSPPAG00000037423	-	94	57.143
ENSPPAG00000028435	-	58	33.058	ENSPPAG00000017014	ARL14	60	33.058
ENSPPAG00000028435	-	86	44.318	ENSPPAG00000041625	RAB18	85	44.318
ENSPPAG00000028435	-	85	42.197	ENSPPAG00000031127	RAB25	81	42.197
ENSPPAG00000028435	-	80	49.383	ENSPPAG00000031604	RAB30	80	49.383
ENSPPAG00000028435	-	81	32.121	ENSPPAG00000031857	-	87	32.121
ENSPPAG00000028435	-	91	36.757	ENSPPAG00000038418	KRAS	98	37.436
ENSPPAG00000028435	-	74	31.126	ENSPPAG00000033987	-	81	31.126
ENSPPAG00000028435	-	67	30.882	ENSPPAG00000037755	ARF5	72	30.882
ENSPPAG00000028435	-	81	47.273	ENSPPAG00000030195	-	76	47.273
ENSPPAG00000028435	-	97	51.269	ENSPPAG00000030253	RAB1A	98	51.269
ENSPPAG00000028435	-	62	31.429	ENSPPAG00000023993	ARFRP1	67	31.429
ENSPPAG00000028435	-	82	52.976	ENSPPAG00000009152	RAB12	79	52.976
ENSPPAG00000028435	-	80	40.476	ENSPPAG00000002892	RAB9B	83	40.476
ENSPPAG00000028435	-	78	42.405	ENSPPAG00000042439	RAB6B	76	42.405
ENSPPAG00000028435	-	83	30.682	ENSPPAG00000031678	DNAJC27	90	30.818
ENSPPAG00000028435	-	79	37.423	ENSPPAG00000036377	MRAS	78	37.423
ENSPPAG00000028435	-	78	43.671	ENSPPAG00000011436	RAB6A	76	43.671
ENSPPAG00000028435	-	68	43.885	ENSPPAG00000031759	RAB14	66	43.885
ENSPPAG00000028435	-	81	38.182	ENSPPAG00000010023	RAB23	69	38.182
ENSPPAG00000028435	-	95	37.500	ENSPPAG00000037206	RAB5C	89	37.500
ENSPPAG00000028435	-	83	35.057	ENSPPAG00000004422	RERG	84	35.057
ENSPPAG00000028435	-	83	48.214	ENSPPAG00000035840	RAB2B	78	48.214
ENSPPAG00000028435	-	95	36.979	ENSPPAG00000035431	RAB5B	89	36.979
ENSPPAG00000028435	-	95	37.379	ENSPPAG00000037180	RAB34	80	37.379
ENSPPAG00000028435	-	79	38.272	ENSPPAG00000037915	NRAS	90	38.272
ENSPPAG00000028435	-	80	38.824	ENSPPAG00000024656	RAB9A	83	38.824
ENSPPAG00000028435	-	86	46.629	ENSPPAG00000041186	RAB39B	84	46.629
ENSPPAG00000028435	-	91	54.348	ENSPPAG00000041445	RAB1B	92	54.348
ENSPPAG00000028435	-	95	39.109	ENSPPAG00000043376	RAB33B	88	39.109

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000028435	-	100	100.000	ENSG00000143545	RAB13	100	100.000	Homo_sapiens
ENSPPAG00000028435	-	99	75.124	ENSACIG00000008584	rab13	97	75.124	Amphilophus_citrinellus
ENSPPAG00000028435	-	100	98.522	ENSANAG00000030247	-	100	98.522	Aotus_nancymaae
ENSPPAG00000028435	-	99	78.713	ENSAMXG00000030712	rab13	99	78.713	Astyanax_mexicanus
ENSPPAG00000028435	-	100	98.030	ENSBTAG00000017604	RAB13	100	98.030	Bos_taurus
ENSPPAG00000028435	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSPPAG00000028435	-	100	98.030	ENSCJAG00000009933	-	100	98.030	Callithrix_jacchus
ENSPPAG00000028435	-	100	97.537	ENSCHIG00000022271	-	100	97.537	Capra_hircus
ENSPPAG00000028435	-	99	91.089	ENSCPOG00000011491	-	99	91.089	Cavia_porcellus
ENSPPAG00000028435	-	100	99.507	ENSCCAG00000028502	-	100	99.507	Cebus_capucinus
ENSPPAG00000028435	-	100	100.000	ENSCATG00000041779	-	100	100.000	Cercocebus_atys
ENSPPAG00000028435	-	100	91.133	ENSCLAG00000006603	-	100	91.133	Chinchilla_lanigera
ENSPPAG00000028435	-	100	100.000	ENSCANG00000036573	-	100	100.000	Colobus_angolensis_palliatus
ENSPPAG00000028435	-	100	95.567	ENSCGRG00001021505	Rab13	100	95.567	Cricetulus_griseus_chok1gshd
ENSPPAG00000028435	-	100	95.567	ENSCGRG00000012126	Rab13	100	95.567	Cricetulus_griseus_crigri
ENSPPAG00000028435	-	99	75.980	ENSCSEG00000002358	rab13	99	75.980	Cynoglossus_semilaevis
ENSPPAG00000028435	-	99	78.218	ENSDARG00000034771	rab13	99	78.218	Danio_rerio
ENSPPAG00000028435	-	100	94.581	ENSDORG00000001591	Rab13	100	94.581	Dipodomys_ordii
ENSPPAG00000028435	-	100	98.522	ENSEASG00005000683	-	100	98.522	Equus_asinus_asinus
ENSPPAG00000028435	-	100	98.522	ENSECAG00000016551	RAB13	100	98.522	Equus_caballus
ENSPPAG00000028435	-	99	90.099	ENSEEUG00000001233	-	99	90.099	Erinaceus_europaeus
ENSPPAG00000028435	-	99	76.733	ENSELUG00000012801	rab13	99	76.733	Esox_lucius
ENSPPAG00000028435	-	100	92.118	ENSFCAG00000045269	-	100	92.118	Felis_catus
ENSPPAG00000028435	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSPPAG00000028435	-	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSPPAG00000028435	-	99	75.248	ENSGACG00000011925	rab13	99	75.248	Gasterosteus_aculeatus
ENSPPAG00000028435	-	85	90.751	ENSGAGG00000000742	-	99	81.281	Gopherus_agassizii
ENSPPAG00000028435	-	100	100.000	ENSGGOG00000023693	RAB13	100	100.000	Gorilla_gorilla
ENSPPAG00000028435	-	100	90.148	ENSHGLG00000008749	RAB13	100	90.148	Heterocephalus_glaber_female
ENSPPAG00000028435	-	100	90.148	ENSHGLG00100013608	RAB13	100	90.148	Heterocephalus_glaber_male
ENSPPAG00000028435	-	99	73.762	ENSHCOG00000007440	rab13	95	86.127	Hippocampus_comes
ENSPPAG00000028435	-	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSPPAG00000028435	-	100	97.044	ENSSTOG00000011222	-	100	97.044	Ictidomys_tridecemlineatus
ENSPPAG00000028435	-	100	92.118	ENSJJAG00000010575	Rab13	100	92.118	Jaculus_jaculus
ENSPPAG00000028435	-	99	75.500	ENSKMAG00000001908	rab13	99	75.500	Kryptolebias_marmoratus
ENSPPAG00000028435	-	99	77.000	ENSLBEG00000026779	rab13	99	77.000	Labrus_bergylta
ENSPPAG00000028435	-	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSPPAG00000028435	-	100	100.000	ENSMFAG00000041018	RAB13	100	100.000	Macaca_fascicularis
ENSPPAG00000028435	-	100	100.000	ENSMNEG00000028951	-	100	100.000	Macaca_nemestrina
ENSPPAG00000028435	-	100	100.000	ENSMLEG00000042247	-	100	100.000	Mandrillus_leucophaeus
ENSPPAG00000028435	-	99	75.248	ENSMAMG00000014602	rab13	99	75.248	Mastacembelus_armatus
ENSPPAG00000028435	-	100	94.581	ENSMAUG00000015713	Rab13	100	94.581	Mesocricetus_auratus
ENSPPAG00000028435	-	100	97.044	ENSMICG00000010340	-	100	97.044	Microcebus_murinus
ENSPPAG00000028435	-	100	95.567	ENSMOCG00000021448	Rab13	100	95.567	Microtus_ochrogaster
ENSPPAG00000028435	-	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSPPAG00000028435	-	100	92.611	MGP_CAROLIEiJ_G0025227	Rab13	100	92.611	Mus_caroli
ENSPPAG00000028435	-	100	91.626	ENSMUSG00000027935	Rab13	100	91.626	Mus_musculus
ENSPPAG00000028435	-	99	92.079	MGP_PahariEiJ_G0026671	Rab13	99	92.079	Mus_pahari
ENSPPAG00000028435	-	100	95.567	ENSNGAG00000010309	Rab13	100	95.567	Nannospalax_galili
ENSPPAG00000028435	-	99	75.248	ENSNBRG00000004124	rab13	99	75.248	Neolamprologus_brichardi
ENSPPAG00000028435	-	100	100.000	ENSNLEG00000028944	-	100	100.000	Nomascus_leucogenys
ENSPPAG00000028435	-	100	92.157	ENSMEUG00000009667	-	100	92.157	Notamacropus_eugenii
ENSPPAG00000028435	-	100	89.655	ENSODEG00000010443	-	100	89.655	Octodon_degus
ENSPPAG00000028435	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSPPAG00000028435	-	99	75.743	ENSONIG00000006340	rab13	99	75.743	Oreochromis_niloticus
ENSPPAG00000028435	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSPPAG00000028435	-	99	76.238	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSPPAG00000028435	-	99	94.059	ENSOGAG00000016969	-	99	94.059	Otolemur_garnettii
ENSPPAG00000028435	-	100	92.118	ENSPPRG00000008865	-	100	92.118	Panthera_pardus
ENSPPAG00000028435	-	100	100.000	ENSPTRG00000001370	RAB13	100	100.000	Pan_troglodytes
ENSPPAG00000028435	-	100	100.000	ENSPANG00000004479	-	100	100.000	Papio_anubis
ENSPPAG00000028435	-	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSPPAG00000028435	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSPPAG00000028435	-	100	92.647	ENSPCIG00000029350	-	100	92.647	Phascolarctos_cinereus
ENSPPAG00000028435	-	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSPPAG00000028435	-	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSPPAG00000028435	-	100	100.000	ENSPPYG00000000790	-	100	100.000	Pongo_abelii
ENSPPAG00000028435	-	100	98.030	ENSPCOG00000012189	-	100	98.030	Propithecus_coquereli
ENSPPAG00000028435	-	100	95.074	ENSPVAG00000011095	-	100	95.074	Pteropus_vampyrus
ENSPPAG00000028435	-	85	86.127	ENSPNAG00000004189	rab13	92	86.127	Pygocentrus_nattereri
ENSPPAG00000028435	-	100	92.611	ENSRNOG00000016733	Rab13	100	92.611	Rattus_norvegicus
ENSPPAG00000028435	-	100	99.507	ENSRBIG00000008552	-	100	99.507	Rhinopithecus_bieti
ENSPPAG00000028435	-	100	99.507	ENSRROG00000036885	-	100	99.507	Rhinopithecus_roxellana
ENSPPAG00000028435	-	100	99.015	ENSSBOG00000020342	-	100	99.015	Saimiri_boliviensis_boliviensis
ENSPPAG00000028435	-	100	91.667	ENSSHAG00000011866	-	100	91.667	Sarcophilus_harrisii
ENSPPAG00000028435	-	100	98.522	ENSSSCG00000006564	-	100	98.522	Sus_scrofa
ENSPPAG00000028435	-	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSPPAG00000028435	-	100	97.044	ENSTBEG00000012734	-	100	97.044	Tupaia_belangeri
ENSPPAG00000028435	-	100	99.507	ENSTTRG00000011183	-	100	99.507	Tursiops_truncatus
ENSPPAG00000028435	-	71	81.944	ENSXETG00000020729	rab13	99	78.882	Xenopus_tropicalis
ENSPPAG00000028435	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus