EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000028480 (Gene tree)
Gene ID: 100972551
Gene Symbol: PTCD2
Alias: -
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 38635 bases
Position: chr5:43552528-43591162
Accession: 100972551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000010532	MRP-S27	PF10037.9	3.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000033184	PTCD2-201	2085	XM_003810488	ENSPPAP00000010532	388 (aa)	XP_003810536	A0A2R8ZZW7
ENSPPAT00000033187	PTCD2-202	282	-	ENSPPAP00000010535	93 (aa)	-	A0A2R9A5G6

Gene Model

Click here to download ENSPPAG00000028480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000028480's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000028480	PTCD2	100	99.485	ENSG00000049883	PTCD2	100	100.000	Homo_sapiens
ENSPPAG00000028480	PTCD2	96	46.133	ENSAPOG00000020682	ptcd2	97	46.133	Acanthochromis_polyacanthus
ENSPPAG00000028480	PTCD2	99	78.182	ENSAMEG00000007194	PTCD2	99	78.182	Ailuropoda_melanoleuca
ENSPPAG00000028480	PTCD2	89	40.974	ENSACIG00000002053	ptcd2	100	40.974	Amphilophus_citrinellus
ENSPPAG00000028480	PTCD2	94	45.753	ENSAOCG00000006616	ptcd2	93	45.753	Amphiprion_ocellaris
ENSPPAG00000028480	PTCD2	94	45.753	ENSAPEG00000022926	ptcd2	93	45.753	Amphiprion_percula
ENSPPAG00000028480	PTCD2	98	55.906	ENSACAG00000009747	PTCD2	97	55.906	Anolis_carolinensis
ENSPPAG00000028480	PTCD2	100	87.113	ENSANAG00000029353	PTCD2	100	87.113	Aotus_nancymaae
ENSPPAG00000028480	PTCD2	98	42.216	ENSACLG00000027742	ptcd2	95	42.216	Astatotilapia_calliptera
ENSPPAG00000028480	PTCD2	85	44.242	ENSAMXG00000029404	ptcd2	88	44.242	Astyanax_mexicanus
ENSPPAG00000028480	PTCD2	99	81.510	ENSBTAG00000014675	PTCD2	100	81.510	Bos_taurus
ENSPPAG00000028480	PTCD2	100	87.629	ENSCJAG00000016364	PTCD2	100	87.629	Callithrix_jacchus
ENSPPAG00000028480	PTCD2	99	76.883	ENSCAFG00000007982	PTCD2	90	76.883	Canis_familiaris
ENSPPAG00000028480	PTCD2	89	78.613	ENSCAFG00020019147	PTCD2	97	78.613	Canis_lupus_dingo
ENSPPAG00000028480	PTCD2	99	82.552	ENSCHIG00000017118	PTCD2	100	82.552	Capra_hircus
ENSPPAG00000028480	PTCD2	99	74.935	ENSCPOG00000040168	PTCD2	100	74.935	Cavia_porcellus
ENSPPAG00000028480	PTCD2	100	87.113	ENSCCAG00000029389	-	100	87.113	Cebus_capucinus
ENSPPAG00000028480	PTCD2	81	83.387	ENSCCAG00000021996	-	98	81.191	Cebus_capucinus
ENSPPAG00000028480	PTCD2	99	90.601	ENSCATG00000019069	PTCD2	100	90.601	Cercocebus_atys
ENSPPAG00000028480	PTCD2	99	74.674	ENSCLAG00000000072	PTCD2	100	74.674	Chinchilla_lanigera
ENSPPAG00000028480	PTCD2	99	91.384	ENSCSAG00000015623	PTCD2	100	91.384	Chlorocebus_sabaeus
ENSPPAG00000028480	PTCD2	89	60.345	ENSCHOG00000010634	PTCD2	100	60.345	Choloepus_hoffmanni
ENSPPAG00000028480	PTCD2	100	54.337	ENSCPBG00000000216	PTCD2	100	54.337	Chrysemys_picta_bellii
ENSPPAG00000028480	PTCD2	100	90.206	ENSCANG00000035636	PTCD2	100	90.206	Colobus_angolensis_palliatus
ENSPPAG00000028480	PTCD2	99	74.611	ENSCGRG00001015289	Ptcd2	84	74.611	Cricetulus_griseus_chok1gshd
ENSPPAG00000028480	PTCD2	99	74.611	ENSCGRG00000006193	Ptcd2	84	74.611	Cricetulus_griseus_crigri
ENSPPAG00000028480	PTCD2	90	45.402	ENSCVAG00000001285	ptcd2	89	45.402	Cyprinodon_variegatus
ENSPPAG00000028480	PTCD2	96	44.118	ENSDARG00000035391	ptcd2	97	44.118	Danio_rerio
ENSPPAG00000028480	PTCD2	99	77.546	ENSDNOG00000008719	PTCD2	100	77.546	Dasypus_novemcinctus
ENSPPAG00000028480	PTCD2	99	78.036	ENSDORG00000004921	Ptcd2	100	78.036	Dipodomys_ordii
ENSPPAG00000028480	PTCD2	99	70.361	ENSETEG00000016542	PTCD2	99	70.361	Echinops_telfairi
ENSPPAG00000028480	PTCD2	99	79.373	ENSEASG00005018038	PTCD2	100	79.373	Equus_asinus_asinus
ENSPPAG00000028480	PTCD2	99	79.427	ENSECAG00000007022	PTCD2	99	79.427	Equus_caballus
ENSPPAG00000028480	PTCD2	99	72.917	ENSEEUG00000014031	PTCD2	99	72.917	Erinaceus_europaeus
ENSPPAG00000028480	PTCD2	90	50.997	ENSELUG00000003584	ptcd2	91	50.997	Esox_lucius
ENSPPAG00000028480	PTCD2	99	73.902	ENSFCAG00000045432	PTCD2	83	73.902	Felis_catus
ENSPPAG00000028480	PTCD2	84	51.376	ENSFALG00000010299	PTCD2	99	51.376	Ficedula_albicollis
ENSPPAG00000028480	PTCD2	99	77.546	ENSFDAG00000018461	PTCD2	100	77.546	Fukomys_damarensis
ENSPPAG00000028480	PTCD2	90	51.282	ENSGMOG00000003637	ptcd2	91	51.282	Gadus_morhua
ENSPPAG00000028480	PTCD2	90	51.143	ENSGALG00000038260	PTCD2	92	51.143	Gallus_gallus
ENSPPAG00000028480	PTCD2	100	57.398	ENSGAGG00000021952	PTCD2	100	57.398	Gopherus_agassizii
ENSPPAG00000028480	PTCD2	100	99.742	ENSGGOG00000010695	PTCD2	100	99.742	Gorilla_gorilla
ENSPPAG00000028480	PTCD2	98	42.480	ENSHBUG00000009191	ptcd2	95	42.480	Haplochromis_burtoni
ENSPPAG00000028480	PTCD2	99	75.718	ENSHGLG00000001234	PTCD2	100	75.718	Heterocephalus_glaber_female
ENSPPAG00000028480	PTCD2	99	75.718	ENSHGLG00100015419	PTCD2	100	75.718	Heterocephalus_glaber_male
ENSPPAG00000028480	PTCD2	97	46.154	ENSHCOG00000001703	ptcd2	95	46.154	Hippocampus_comes
ENSPPAG00000028480	PTCD2	84	44.753	ENSIPUG00000006080	ptcd2	90	44.509	Ictalurus_punctatus
ENSPPAG00000028480	PTCD2	98	80.366	ENSSTOG00000006596	PTCD2	99	80.366	Ictidomys_tridecemlineatus
ENSPPAG00000028480	PTCD2	99	78.068	ENSJJAG00000024388	Ptcd2	100	78.068	Jaculus_jaculus
ENSPPAG00000028480	PTCD2	96	42.246	ENSKMAG00000009329	ptcd2	97	42.246	Kryptolebias_marmoratus
ENSPPAG00000028480	PTCD2	89	45.954	ENSLBEG00000024871	ptcd2	88	45.954	Labrus_bergylta
ENSPPAG00000028480	PTCD2	94	54.945	ENSLOCG00000011122	ptcd2	94	54.945	Lepisosteus_oculatus
ENSPPAG00000028480	PTCD2	80	78.135	ENSLAFG00000004115	PTCD2	100	78.135	Loxodonta_africana
ENSPPAG00000028480	PTCD2	100	90.464	ENSMFAG00000031516	PTCD2	100	90.464	Macaca_fascicularis
ENSPPAG00000028480	PTCD2	99	90.601	ENSMNEG00000007537	PTCD2	100	90.601	Macaca_nemestrina
ENSPPAG00000028480	PTCD2	100	90.464	ENSMLEG00000031093	PTCD2	100	90.464	Mandrillus_leucophaeus
ENSPPAG00000028480	PTCD2	90	47.989	ENSMAMG00000018529	ptcd2	91	47.989	Mastacembelus_armatus
ENSPPAG00000028480	PTCD2	98	42.216	ENSMZEG00005003625	ptcd2	95	42.216	Maylandia_zebra
ENSPPAG00000028480	PTCD2	90	51.724	ENSMGAG00000005033	PTCD2	100	51.724	Meleagris_gallopavo
ENSPPAG00000028480	PTCD2	99	54.308	ENSMAUG00000020253	Ptcd2	100	54.830	Mesocricetus_auratus
ENSPPAG00000028480	PTCD2	99	81.137	ENSMICG00000004535	PTCD2	99	81.137	Microcebus_murinus
ENSPPAG00000028480	PTCD2	99	73.629	ENSMOCG00000019985	Ptcd2	100	73.629	Microtus_ochrogaster
ENSPPAG00000028480	PTCD2	99	57.031	ENSMODG00000001695	PTCD2	100	57.031	Monodelphis_domestica
ENSPPAG00000028480	PTCD2	90	49.138	ENSMALG00000022372	ptcd2	91	49.138	Monopterus_albus
ENSPPAG00000028480	PTCD2	99	73.890	MGP_CAROLIEiJ_G0018829	Ptcd2	100	73.890	Mus_caroli
ENSPPAG00000028480	PTCD2	99	73.107	ENSMUSG00000021650	Ptcd2	100	73.107	Mus_musculus
ENSPPAG00000028480	PTCD2	99	75.979	MGP_PahariEiJ_G0015904	Ptcd2	100	75.979	Mus_pahari
ENSPPAG00000028480	PTCD2	99	73.629	MGP_SPRETEiJ_G0019711	Ptcd2	100	73.629	Mus_spretus
ENSPPAG00000028480	PTCD2	99	79.112	ENSMPUG00000014401	PTCD2	100	79.112	Mustela_putorius_furo
ENSPPAG00000028480	PTCD2	99	78.756	ENSMLUG00000007374	PTCD2	99	78.756	Myotis_lucifugus
ENSPPAG00000028480	PTCD2	99	74.674	ENSNGAG00000005027	Ptcd2	100	74.674	Nannospalax_galili
ENSPPAG00000028480	PTCD2	98	42.480	ENSNBRG00000008174	ptcd2	96	42.480	Neolamprologus_brichardi
ENSPPAG00000028480	PTCD2	85	43.030	ENSNBRG00000000092	-	100	43.030	Neolamprologus_brichardi
ENSPPAG00000028480	PTCD2	100	96.134	ENSNLEG00000004516	PTCD2	100	96.134	Nomascus_leucogenys
ENSPPAG00000028480	PTCD2	99	45.995	ENSMEUG00000014012	-	99	45.995	Notamacropus_eugenii
ENSPPAG00000028480	PTCD2	99	74.419	ENSOPRG00000007290	PTCD2	99	74.419	Ochotona_princeps
ENSPPAG00000028480	PTCD2	99	77.023	ENSODEG00000016417	PTCD2	100	77.023	Octodon_degus
ENSPPAG00000028480	PTCD2	82	44.062	ENSONIG00000011269	ptcd2	91	44.062	Oreochromis_niloticus
ENSPPAG00000028480	PTCD2	94	79.945	ENSOCUG00000007970	PTCD2	100	78.590	Oryctolagus_cuniculus
ENSPPAG00000028480	PTCD2	94	45.604	ENSORLG00000003851	ptcd2	92	45.604	Oryzias_latipes
ENSPPAG00000028480	PTCD2	94	45.055	ENSORLG00020009823	ptcd2	94	45.055	Oryzias_latipes_hni
ENSPPAG00000028480	PTCD2	89	46.243	ENSORLG00015016777	ptcd2	99	46.243	Oryzias_latipes_hsok
ENSPPAG00000028480	PTCD2	93	44.199	ENSOMEG00000012396	ptcd2	87	44.199	Oryzias_melastigma
ENSPPAG00000028480	PTCD2	99	76.486	ENSOGAG00000008390	PTCD2	99	76.486	Otolemur_garnettii
ENSPPAG00000028480	PTCD2	99	82.171	ENSOARG00000005087	PTCD2	99	82.171	Ovis_aries
ENSPPAG00000028480	PTCD2	100	99.227	ENSPTRG00000016968	PTCD2	100	99.227	Pan_troglodytes
ENSPPAG00000028480	PTCD2	89	91.304	ENSPANG00000006611	PTCD2	89	91.304	Papio_anubis
ENSPPAG00000028480	PTCD2	90	47.309	ENSPKIG00000019896	ptcd2	92	47.309	Paramormyrops_kingsleyae
ENSPPAG00000028480	PTCD2	79	61.238	ENSPSIG00000014559	PTCD2	95	61.238	Pelodiscus_sinensis
ENSPPAG00000028480	PTCD2	99	73.766	ENSPEMG00000000884	Ptcd2	100	73.766	Peromyscus_maniculatus_bairdii
ENSPPAG00000028480	PTCD2	99	60.156	ENSPCIG00000029047	PTCD2	100	60.156	Phascolarctos_cinereus
ENSPPAG00000028480	PTCD2	90	44.253	ENSPLAG00000010456	ptcd2	91	44.253	Poecilia_latipinna
ENSPPAG00000028480	PTCD2	90	44.253	ENSPREG00000021797	ptcd2	88	44.253	Poecilia_reticulata
ENSPPAG00000028480	PTCD2	99	83.463	ENSPPYG00000015543	PTCD2	99	83.463	Pongo_abelii
ENSPPAG00000028480	PTCD2	80	67.949	ENSPCAG00000006806	PTCD2	99	67.949	Procavia_capensis
ENSPPAG00000028480	PTCD2	99	76.943	ENSPVAG00000010935	PTCD2	99	76.943	Pteropus_vampyrus
ENSPPAG00000028480	PTCD2	98	42.216	ENSPNYG00000003122	ptcd2	95	42.216	Pundamilia_nyererei
ENSPPAG00000028480	PTCD2	96	47.215	ENSPNAG00000021490	ptcd2	97	47.215	Pygocentrus_nattereri
ENSPPAG00000028480	PTCD2	99	73.629	ENSRNOG00000028403	Ptcd2	100	73.629	Rattus_norvegicus
ENSPPAG00000028480	PTCD2	100	84.536	ENSRBIG00000032929	PTCD2	100	84.536	Rhinopithecus_bieti
ENSPPAG00000028480	PTCD2	99	90.601	ENSRROG00000000080	PTCD2	100	90.601	Rhinopithecus_roxellana
ENSPPAG00000028480	PTCD2	99	85.901	ENSSBOG00000018911	PTCD2	100	85.901	Saimiri_boliviensis_boliviensis
ENSPPAG00000028480	PTCD2	99	59.115	ENSSHAG00000003833	PTCD2	99	59.115	Sarcophilus_harrisii
ENSPPAG00000028480	PTCD2	86	47.147	ENSSFOG00015015415	ptcd2	86	47.147	Scleropages_formosus
ENSPPAG00000028480	PTCD2	89	44.380	ENSSMAG00000010350	ptcd2	90	44.380	Scophthalmus_maximus
ENSPPAG00000028480	PTCD2	94	47.397	ENSSDUG00000008142	ptcd2	90	47.397	Seriola_dumerili
ENSPPAG00000028480	PTCD2	94	47.671	ENSSLDG00000015284	ptcd2	95	47.671	Seriola_lalandi_dorsalis
ENSPPAG00000028480	PTCD2	80	70.323	ENSSARG00000004983	PTCD2	99	70.323	Sorex_araneus
ENSPPAG00000028480	PTCD2	99	51.429	ENSSPUG00000000176	PTCD2	96	51.429	Sphenodon_punctatus
ENSPPAG00000028480	PTCD2	96	44.000	ENSSPAG00000008591	ptcd2	96	44.000	Stegastes_partitus
ENSPPAG00000028480	PTCD2	99	82.338	ENSSSCG00000016975	PTCD2	90	82.338	Sus_scrofa
ENSPPAG00000028480	PTCD2	89	51.304	ENSTGUG00000005705	PTCD2	99	51.304	Taeniopygia_guttata
ENSPPAG00000028480	PTCD2	99	78.756	ENSTBEG00000016559	PTCD2	99	78.756	Tupaia_belangeri
ENSPPAG00000028480	PTCD2	99	82.429	ENSTTRG00000011851	PTCD2	99	82.429	Tursiops_truncatus
ENSPPAG00000028480	PTCD2	99	78.182	ENSUAMG00000007583	PTCD2	90	78.182	Ursus_americanus
ENSPPAG00000028480	PTCD2	99	77.807	ENSUMAG00000007666	PTCD2	100	77.807	Ursus_maritimus
ENSPPAG00000028480	PTCD2	99	80.879	ENSVPAG00000009597	PTCD2	99	80.879	Vicugna_pacos
ENSPPAG00000028480	PTCD2	99	77.023	ENSVVUG00000007299	-	100	77.023	Vulpes_vulpes
ENSPPAG00000028480	PTCD2	90	52.707	ENSXETG00000031652	PTCD2	92	52.707	Xenopus_tropicalis
ENSPPAG00000028480	PTCD2	90	43.966	ENSXMAG00000005940	ptcd2	82	43.966	Xiphophorus_maculatus