EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000028514 (Gene tree)
Gene ID: 100990068
Gene Symbol: TNRC6B
Alias: -
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 195808 bases
Position: chr22:38850107-39045914
Accession: 100990068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000010659	Ago_hook	PF10427.9	6.5e-21	1	1
ENSPPAP00000010673	Ago_hook	PF10427.9	9.8e-20	1	1
ENSPPAP00000010666	Ago_hook	PF10427.9	1.3e-19	1	1
ENSPPAP00000010668	Ago_hook	PF10427.9	6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000033310	TNRC6B-201	3090	-	ENSPPAP00000010659	1029 (aa)	-	A0A2R9A4J5
ENSPPAT00000033320	TNRC6B-203	5172	XM_008975122	ENSPPAP00000010668	1723 (aa)	XP_008973370	A0A2R9A1E8
ENSPPAT00000033325	TNRC6B-204	5292	-	ENSPPAP00000010673	1763 (aa)	-	A0A2R9A1F8
ENSPPAT00000033318	TNRC6B-202	5502	XM_008975121	ENSPPAP00000010666	1833 (aa)	XP_008973369	A0A2R9A085

Gene Model

Click here to download ENSPPAG00000028514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000028514's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000028514	TNRC6B	93	44.048	ENSPPAG00000028379	TNRC6A	97	40.761
ENSPPAG00000028514	TNRC6B	88	50.000	ENSPPAG00000027160	TNRC6C	99	37.847

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000028514	TNRC6B	100	99.782	ENSG00000100354	TNRC6B	100	100.000	Homo_sapiens
ENSPPAG00000028514	TNRC6B	99	97.380	ENSAMEG00000011025	TNRC6B	99	97.380	Ailuropoda_melanoleuca
ENSPPAG00000028514	TNRC6B	98	88.529	ENSAPLG00000009347	TNRC6B	100	88.765	Anas_platyrhynchos
ENSPPAG00000028514	TNRC6B	95	85.816	ENSACAG00000007281	TNRC6B	98	73.409	Anolis_carolinensis
ENSPPAG00000028514	TNRC6B	100	99.514	ENSANAG00000035042	TNRC6B	100	99.514	Aotus_nancymaae
ENSPPAG00000028514	TNRC6B	89	63.953	ENSAMXG00000008707	tnrc6b	82	46.968	Astyanax_mexicanus
ENSPPAG00000028514	TNRC6B	100	96.063	ENSBTAG00000021076	TNRC6B	99	96.057	Bos_taurus
ENSPPAG00000028514	TNRC6B	100	99.223	ENSCJAG00000002732	TNRC6B	100	100.000	Callithrix_jacchus
ENSPPAG00000028514	TNRC6B	99	97.219	ENSCAFG00000001255	TNRC6B	100	97.219	Canis_familiaris
ENSPPAG00000028514	TNRC6B	99	97.403	ENSCAFG00020002189	TNRC6B	99	95.204	Canis_lupus_dingo
ENSPPAG00000028514	TNRC6B	98	98.193	ENSCHIG00000003491	TNRC6B	99	95.618	Capra_hircus
ENSPPAG00000028514	TNRC6B	100	98.154	ENSTSYG00000011836	TNRC6B	100	98.154	Carlito_syrichta
ENSPPAG00000028514	TNRC6B	100	96.118	ENSCPOG00000005705	TNRC6B	99	96.091	Cavia_porcellus
ENSPPAG00000028514	TNRC6B	100	98.091	ENSCCAG00000019912	TNRC6B	100	98.091	Cebus_capucinus
ENSPPAG00000028514	TNRC6B	100	98.800	ENSCATG00000029291	TNRC6B	100	98.800	Cercocebus_atys
ENSPPAG00000028514	TNRC6B	100	96.462	ENSCLAG00000016942	TNRC6B	97	96.540	Chinchilla_lanigera
ENSPPAG00000028514	TNRC6B	98	95.055	ENSCSAG00000006021	TNRC6B	98	95.112	Chlorocebus_sabaeus
ENSPPAG00000028514	TNRC6B	61	98.901	ENSCHOG00000010004	-	62	98.901	Choloepus_hoffmanni
ENSPPAG00000028514	TNRC6B	92	87.645	ENSCPBG00000022932	TNRC6B	99	87.587	Chrysemys_picta_bellii
ENSPPAG00000028514	TNRC6B	100	99.130	ENSCANG00000030776	TNRC6B	100	99.130	Colobus_angolensis_palliatus
ENSPPAG00000028514	TNRC6B	95	95.694	ENSCGRG00001020166	Tnrc6b	95	95.514	Cricetulus_griseus_chok1gshd
ENSPPAG00000028514	TNRC6B	100	95.750	ENSCGRG00000016696	Tnrc6b	98	95.572	Cricetulus_griseus_crigri
ENSPPAG00000028514	TNRC6B	100	97.278	ENSDNOG00000012744	TNRC6B	99	96.347	Dasypus_novemcinctus
ENSPPAG00000028514	TNRC6B	100	97.622	ENSDORG00000003386	Tnrc6b	97	96.714	Dipodomys_ordii
ENSPPAG00000028514	TNRC6B	99	88.331	ENSETEG00000006570	TNRC6B	99	88.681	Echinops_telfairi
ENSPPAG00000028514	TNRC6B	99	97.754	ENSEASG00005005306	TNRC6B	99	96.266	Equus_asinus_asinus
ENSPPAG00000028514	TNRC6B	100	98.109	ENSECAG00000009759	TNRC6B	100	99.500	Equus_caballus
ENSPPAG00000028514	TNRC6B	75	97.436	ENSEEUG00000008690	-	59	97.436	Erinaceus_europaeus
ENSPPAG00000028514	TNRC6B	52	63.907	ENSELUG00000019468	-	71	63.816	Esox_lucius
ENSPPAG00000028514	TNRC6B	100	97.529	ENSFCAG00000004791	TNRC6B	100	97.120	Felis_catus
ENSPPAG00000028514	TNRC6B	96	88.856	ENSFALG00000012195	TNRC6B	100	88.856	Ficedula_albicollis
ENSPPAG00000028514	TNRC6B	100	96.222	ENSFDAG00000021368	TNRC6B	97	96.425	Fukomys_damarensis
ENSPPAG00000028514	TNRC6B	98	89.329	ENSGALG00000012050	TNRC6B	96	89.386	Gallus_gallus
ENSPPAG00000028514	TNRC6B	99	89.301	ENSGAGG00000025188	TNRC6B	98	89.247	Gopherus_agassizii
ENSPPAG00000028514	TNRC6B	100	99.727	ENSGGOG00000008444	TNRC6B	100	99.727	Gorilla_gorilla
ENSPPAG00000028514	TNRC6B	100	97.067	ENSHGLG00000009306	TNRC6B	100	97.067	Heterocephalus_glaber_female
ENSPPAG00000028514	TNRC6B	100	97.272	ENSHGLG00100018108	TNRC6B	98	96.416	Heterocephalus_glaber_male
ENSPPAG00000028514	TNRC6B	89	57.522	ENSIPUG00000001515	tnrc6b	93	50.138	Ictalurus_punctatus
ENSPPAG00000028514	TNRC6B	100	97.628	ENSSTOG00000008927	TNRC6B	97	96.473	Ictidomys_tridecemlineatus
ENSPPAG00000028514	TNRC6B	100	96.217	ENSJJAG00000015779	Tnrc6b	96	95.740	Jaculus_jaculus
ENSPPAG00000028514	TNRC6B	96	78.667	ENSLACG00000000628	-	99	61.132	Latimeria_chalumnae
ENSPPAG00000028514	TNRC6B	82	95.735	ENSLAFG00000014473	TNRC6B	100	96.722	Loxodonta_africana
ENSPPAG00000028514	TNRC6B	100	98.909	ENSMFAG00000003862	TNRC6B	100	98.909	Macaca_fascicularis
ENSPPAG00000028514	TNRC6B	100	99.417	ENSMMUG00000021345	TNRC6B	100	99.417	Macaca_mulatta
ENSPPAG00000028514	TNRC6B	99	99.299	ENSMNEG00000042745	TNRC6B	100	99.299	Macaca_nemestrina
ENSPPAG00000028514	TNRC6B	100	99.417	ENSMLEG00000041780	TNRC6B	100	99.417	Mandrillus_leucophaeus
ENSPPAG00000028514	TNRC6B	99	89.548	ENSMGAG00000012333	TNRC6B	99	89.442	Meleagris_gallopavo
ENSPPAG00000028514	TNRC6B	100	95.750	ENSMAUG00000016123	Tnrc6b	96	95.515	Mesocricetus_auratus
ENSPPAG00000028514	TNRC6B	100	98.159	ENSMICG00000014056	TNRC6B	100	98.159	Microcebus_murinus
ENSPPAG00000028514	TNRC6B	96	96.000	ENSMOCG00000020334	Tnrc6b	97	96.000	Microtus_ochrogaster
ENSPPAG00000028514	TNRC6B	65	80.645	ENSMMOG00000002799	si:dkey-217f16.6	59	69.388	Mola_mola
ENSPPAG00000028514	TNRC6B	100	95.514	MGP_CAROLIEiJ_G0020043	Tnrc6b	96	95.515	Mus_caroli
ENSPPAG00000028514	TNRC6B	100	95.632	ENSMUSG00000047888	Tnrc6b	99	95.747	Mus_musculus
ENSPPAG00000028514	TNRC6B	100	95.159	MGP_PahariEiJ_G0020045	Tnrc6b	96	95.109	Mus_pahari
ENSPPAG00000028514	TNRC6B	100	95.750	MGP_SPRETEiJ_G0020941	Tnrc6b	98	96.081	Mus_spretus
ENSPPAG00000028514	TNRC6B	96	98.282	ENSMPUG00000016442	TNRC6B	100	93.298	Mustela_putorius_furo
ENSPPAG00000028514	TNRC6B	99	96.889	ENSMLUG00000008765	TNRC6B	99	96.889	Myotis_lucifugus
ENSPPAG00000028514	TNRC6B	100	95.765	ENSNGAG00000021294	Tnrc6b	96	95.750	Nannospalax_galili
ENSPPAG00000028514	TNRC6B	100	99.806	ENSNLEG00000015311	TNRC6B	100	99.806	Nomascus_leucogenys
ENSPPAG00000028514	TNRC6B	99	90.909	ENSOPRG00000012054	TNRC6B	88	94.617	Ochotona_princeps
ENSPPAG00000028514	TNRC6B	100	96.349	ENSODEG00000013146	TNRC6B	97	96.542	Octodon_degus
ENSPPAG00000028514	TNRC6B	89	68.889	ENSONIG00000019679	-	99	41.405	Oreochromis_niloticus
ENSPPAG00000028514	TNRC6B	100	97.509	ENSOCUG00000016128	TNRC6B	96	96.375	Oryctolagus_cuniculus
ENSPPAG00000028514	TNRC6B	100	97.714	ENSOGAG00000011096	TNRC6B	100	97.714	Otolemur_garnettii
ENSPPAG00000028514	TNRC6B	100	96.127	ENSOARG00000017238	TNRC6B	97	94.532	Ovis_aries
ENSPPAG00000028514	TNRC6B	100	98.251	ENSPPRG00000017741	TNRC6B	100	98.251	Panthera_pardus
ENSPPAG00000028514	TNRC6B	99	92.611	ENSPTIG00000022064	TNRC6B	98	94.150	Panthera_tigris_altaica
ENSPPAG00000028514	TNRC6B	100	99.806	ENSPTRG00000047826	TNRC6B	100	99.806	Pan_troglodytes
ENSPPAG00000028514	TNRC6B	98	93.709	ENSPANG00000009271	TNRC6B	98	97.368	Papio_anubis
ENSPPAG00000028514	TNRC6B	98	88.724	ENSPSIG00000005318	TNRC6B	98	88.781	Pelodiscus_sinensis
ENSPPAG00000028514	TNRC6B	100	95.412	ENSPEMG00000011403	Tnrc6b	96	95.006	Peromyscus_maniculatus_bairdii
ENSPPAG00000028514	TNRC6B	99	87.652	ENSPCIG00000020347	TNRC6B	99	87.927	Phascolarctos_cinereus
ENSPPAG00000028514	TNRC6B	93	56.667	ENSPFOG00000006033	-	96	43.959	Poecilia_formosa
ENSPPAG00000028514	TNRC6B	87	69.863	ENSPLAG00000001418	-	98	39.247	Poecilia_latipinna
ENSPPAG00000028514	TNRC6B	100	99.420	ENSPPYG00000011849	TNRC6B	100	99.420	Pongo_abelii
ENSPPAG00000028514	TNRC6B	95	87.452	ENSPCAG00000008739	TNRC6B	75	91.515	Procavia_capensis
ENSPPAG00000028514	TNRC6B	100	98.547	ENSPCOG00000020790	TNRC6B	100	98.547	Propithecus_coquereli
ENSPPAG00000028514	TNRC6B	94	96.047	ENSPVAG00000004975	TNRC6B	92	95.658	Pteropus_vampyrus
ENSPPAG00000028514	TNRC6B	82	60.714	ENSPNAG00000011713	tnrc6b	72	46.616	Pygocentrus_nattereri
ENSPPAG00000028514	TNRC6B	100	94.860	ENSRNOG00000024907	Tnrc6b	96	95.020	Rattus_norvegicus
ENSPPAG00000028514	TNRC6B	100	99.182	ENSRBIG00000035576	TNRC6B	100	99.212	Rhinopithecus_bieti
ENSPPAG00000028514	TNRC6B	100	99.128	ENSRROG00000031135	TNRC6B	100	99.128	Rhinopithecus_roxellana
ENSPPAG00000028514	TNRC6B	99	99.241	ENSSBOG00000029743	TNRC6B	100	99.241	Saimiri_boliviensis_boliviensis
ENSPPAG00000028514	TNRC6B	99	87.869	ENSSHAG00000009692	TNRC6B	99	87.978	Sarcophilus_harrisii
ENSPPAG00000028514	TNRC6B	74	86.057	ENSSARG00000007971	-	70	88.636	Sorex_araneus
ENSPPAG00000028514	TNRC6B	92	88.539	ENSSPUG00000010801	TNRC6B	100	88.420	Sphenodon_punctatus
ENSPPAG00000028514	TNRC6B	100	97.865	ENSSSCG00000000078	TNRC6B	99	98.495	Sus_scrofa
ENSPPAG00000028514	TNRC6B	93	88.279	ENSTGUG00000010138	-	99	88.217	Taeniopygia_guttata
ENSPPAG00000028514	TNRC6B	100	94.149	ENSTTRG00000011465	TNRC6B	95	98.325	Tursiops_truncatus
ENSPPAG00000028514	TNRC6B	99	96.374	ENSUAMG00000007174	TNRC6B	99	96.374	Ursus_americanus
ENSPPAG00000028514	TNRC6B	99	96.029	ENSUMAG00000014336	TNRC6B	100	97.043	Ursus_maritimus
ENSPPAG00000028514	TNRC6B	82	93.085	ENSVPAG00000001467	TNRC6B	72	91.210	Vicugna_pacos
ENSPPAG00000028514	TNRC6B	100	97.639	ENSVVUG00000007064	TNRC6B	98	97.277	Vulpes_vulpes
ENSPPAG00000028514	TNRC6B	72	49.872	ENSXCOG00000003042	-	97	38.740	Xiphophorus_couchianus