EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000028523 (Gene tree)
Gene ID: 100992321
Gene Symbol: SMARCA5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 40750 bases
Position: chr4:147174060-147214809
Accession: 100992321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000010642	ResIII	PF04851.15	7.6e-11	1	1
ENSPPAP00000010649	ResIII	PF04851.15	8.8e-11	1	1
ENSPPAP00000010646	ResIII	PF04851.15	1e-10	1	1
ENSPPAP00000010648	ResIII	PF04851.15	1.1e-10	1	1
ENSPPAP00000010649	DEAD	PF00270.29	5.2e-06	1	1
ENSPPAP00000010642	DEAD	PF00270.29	5.5e-06	1	1
ENSPPAP00000010648	DEAD	PF00270.29	5.7e-06	1	1
ENSPPAP00000010646	DEAD	PF00270.29	6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000033294	SMARCA5-201	3373	-	ENSPPAP00000010642	1024 (aa)	-	A0A2R9A088
ENSPPAT00000033306	SMARCA5-205	1032	-	ENSPPAP00000010654	343 (aa)	-	A0A2R9A4J0
ENSPPAT00000033300	SMARCA5-203	3135	-	ENSPPAP00000010648	1044 (aa)	-	A0A2R9A1C9
ENSPPAT00000033301	SMARCA5-204	2985	-	ENSPPAP00000010649	994 (aa)	-	A0A2R9A4I5
ENSPPAT00000033298	SMARCA5-202	4553	XM_003820704	ENSPPAP00000010646	1052 (aa)	XP_003820752	A0A2R9A065

Gene Model

Click here to download ENSPPAG00000028523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000028523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000028523	SMARCA5	50	47.600	ENSPPAG00000001726	HELLS	74	47.600
ENSPPAG00000028523	SMARCA5	99	84.934	ENSPPAG00000034647	SMARCA1	93	84.934
ENSPPAG00000028523	SMARCA5	57	43.380	ENSPPAG00000039193	CHD1L	63	43.680

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000028523	SMARCA5	100	99.810	ENSG00000153147	SMARCA5	100	99.810	Homo_sapiens
ENSPPAG00000028523	SMARCA5	100	98.574	ENSAMEG00000009585	SMARCA5	100	98.574	Ailuropoda_melanoleuca
ENSPPAG00000028523	SMARCA5	97	96.612	ENSAPLG00000009206	SMARCA5	100	96.612	Anas_platyrhynchos
ENSPPAG00000028523	SMARCA5	99	96.680	ENSACAG00000003038	SMARCA5	96	96.680	Anolis_carolinensis
ENSPPAG00000028523	SMARCA5	100	99.144	ENSANAG00000019345	SMARCA5	100	99.144	Aotus_nancymaae
ENSPPAG00000028523	SMARCA5	99	99.295	ENSBTAG00000003399	SMARCA5	100	98.004	Bos_taurus
ENSPPAG00000028523	SMARCA5	100	99.335	ENSCJAG00000002735	SMARCA5	100	99.335	Callithrix_jacchus
ENSPPAG00000028523	SMARCA5	99	99.396	ENSCAFG00000007525	SMARCA5	100	98.384	Canis_familiaris
ENSPPAG00000028523	SMARCA5	98	99.383	ENSCAFG00020025641	SMARCA5	99	98.450	Canis_lupus_dingo
ENSPPAG00000028523	SMARCA5	100	96.768	ENSCHIG00000016375	-	100	96.768	Capra_hircus
ENSPPAG00000028523	SMARCA5	100	98.479	ENSCHIG00000013730	-	100	98.479	Capra_hircus
ENSPPAG00000028523	SMARCA5	100	99.497	ENSTSYG00000009954	SMARCA5	100	99.497	Carlito_syrichta
ENSPPAG00000028523	SMARCA5	97	98.864	ENSCAPG00000013747	SMARCA5	95	98.864	Cavia_aperea
ENSPPAG00000028523	SMARCA5	99	99.094	ENSCPOG00000002259	SMARCA5	100	97.909	Cavia_porcellus
ENSPPAG00000028523	SMARCA5	100	99.335	ENSCCAG00000027215	SMARCA5	100	99.335	Cebus_capucinus
ENSPPAG00000028523	SMARCA5	100	99.620	ENSCATG00000044917	SMARCA5	100	99.620	Cercocebus_atys
ENSPPAG00000028523	SMARCA5	99	99.094	ENSCLAG00000006153	SMARCA5	100	99.094	Chinchilla_lanigera
ENSPPAG00000028523	SMARCA5	97	99.897	ENSCSAG00000003448	SMARCA5	100	99.897	Chlorocebus_sabaeus
ENSPPAG00000028523	SMARCA5	91	98.178	ENSCHOG00000011724	SMARCA5	90	98.178	Choloepus_hoffmanni
ENSPPAG00000028523	SMARCA5	99	98.189	ENSCPBG00000027535	SMARCA5	96	98.189	Chrysemys_picta_bellii
ENSPPAG00000028523	SMARCA5	100	99.430	ENSCANG00000041629	SMARCA5	100	99.430	Colobus_angolensis_palliatus
ENSPPAG00000028523	SMARCA5	99	99.295	ENSCGRG00001012719	Smarca5	99	97.624	Cricetulus_griseus_chok1gshd
ENSPPAG00000028523	SMARCA5	99	99.295	ENSCGRG00000001417	Smarca5	99	99.295	Cricetulus_griseus_crigri
ENSPPAG00000028523	SMARCA5	99	96.475	ENSDNOG00000009158	SMARCA5	98	95.164	Dasypus_novemcinctus
ENSPPAG00000028523	SMARCA5	95	90.612	ENSDORG00000003466	Smarca5	97	90.612	Dipodomys_ordii
ENSPPAG00000028523	SMARCA5	97	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSPPAG00000028523	SMARCA5	100	98.764	ENSEASG00005001866	SMARCA5	100	98.764	Equus_asinus_asinus
ENSPPAG00000028523	SMARCA5	100	98.764	ENSECAG00000002676	SMARCA5	100	98.764	Equus_caballus
ENSPPAG00000028523	SMARCA5	99	94.864	ENSEEUG00000013176	SMARCA5	100	94.864	Erinaceus_europaeus
ENSPPAG00000028523	SMARCA5	97	89.588	ENSELUG00000014653	SMARCA5	99	89.588	Esox_lucius
ENSPPAG00000028523	SMARCA5	100	98.574	ENSFCAG00000004544	SMARCA5	100	98.574	Felis_catus
ENSPPAG00000028523	SMARCA5	97	97.320	ENSFALG00000004987	SMARCA5	100	97.320	Ficedula_albicollis
ENSPPAG00000028523	SMARCA5	100	99.195	ENSFDAG00000021016	SMARCA5	100	99.295	Fukomys_damarensis
ENSPPAG00000028523	SMARCA5	98	89.560	ENSGMOG00000007519	SMARCA5	95	89.082	Gadus_morhua
ENSPPAG00000028523	SMARCA5	99	97.586	ENSGALG00000009913	SMARCA5	96	97.590	Gallus_gallus
ENSPPAG00000028523	SMARCA5	98	90.788	ENSGACG00000017238	SMARCA5	95	90.788	Gasterosteus_aculeatus
ENSPPAG00000028523	SMARCA5	99	98.290	ENSGAGG00000019882	SMARCA5	96	98.290	Gopherus_agassizii
ENSPPAG00000028523	SMARCA5	100	99.899	ENSGGOG00000012595	SMARCA5	100	99.899	Gorilla_gorilla
ENSPPAG00000028523	SMARCA5	99	99.194	ENSHGLG00000000816	-	99	97.719	Heterocephalus_glaber_female
ENSPPAG00000028523	SMARCA5	99	89.527	ENSHGLG00000000317	-	95	89.527	Heterocephalus_glaber_female
ENSPPAG00000028523	SMARCA5	100	99.095	ENSHGLG00100018421	-	100	99.194	Heterocephalus_glaber_male
ENSPPAG00000028523	SMARCA5	100	98.386	ENSSTOG00000010683	SMARCA5	99	98.386	Ictidomys_tridecemlineatus
ENSPPAG00000028523	SMARCA5	99	98.993	ENSJJAG00000014965	Smarca5	100	97.243	Jaculus_jaculus
ENSPPAG00000028523	SMARCA5	99	95.257	ENSLACG00000007091	SMARCA5	97	95.257	Latimeria_chalumnae
ENSPPAG00000028523	SMARCA5	99	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSPPAG00000028523	SMARCA5	99	99.396	ENSLAFG00000007795	SMARCA5	100	98.384	Loxodonta_africana
ENSPPAG00000028523	SMARCA5	100	99.620	ENSMFAG00000043649	SMARCA5	100	99.620	Macaca_fascicularis
ENSPPAG00000028523	SMARCA5	100	99.620	ENSMMUG00000000829	SMARCA5	100	99.620	Macaca_mulatta
ENSPPAG00000028523	SMARCA5	100	99.620	ENSMNEG00000031916	SMARCA5	100	99.620	Macaca_nemestrina
ENSPPAG00000028523	SMARCA5	100	99.620	ENSMLEG00000042393	SMARCA5	100	99.620	Mandrillus_leucophaeus
ENSPPAG00000028523	SMARCA5	99	97.586	ENSMGAG00000003517	SMARCA5	99	97.586	Meleagris_gallopavo
ENSPPAG00000028523	SMARCA5	99	99.295	ENSMAUG00000015902	Smarca5	98	99.295	Mesocricetus_auratus
ENSPPAG00000028523	SMARCA5	100	98.764	ENSMICG00000003971	SMARCA5	100	98.764	Microcebus_murinus
ENSPPAG00000028523	SMARCA5	99	98.993	ENSMOCG00000016986	-	99	97.529	Microtus_ochrogaster
ENSPPAG00000028523	SMARCA5	99	98.792	ENSMODG00000000391	SMARCA5	98	96.321	Monodelphis_domestica
ENSPPAG00000028523	SMARCA5	99	98.993	ENSMUSG00000031715	Smarca5	100	97.433	Mus_musculus
ENSPPAG00000028523	SMARCA5	99	99.194	MGP_PahariEiJ_G0022862	Smarca5	100	97.624	Mus_pahari
ENSPPAG00000028523	SMARCA5	100	98.574	ENSMLUG00000000468	SMARCA5	100	98.574	Myotis_lucifugus
ENSPPAG00000028523	SMARCA5	99	99.194	ENSNGAG00000000441	Smarca5	100	97.719	Nannospalax_galili
ENSPPAG00000028523	SMARCA5	100	99.620	ENSNLEG00000005383	SMARCA5	100	99.620	Nomascus_leucogenys
ENSPPAG00000028523	SMARCA5	97	91.219	ENSMEUG00000001267	SMARCA5	100	91.219	Notamacropus_eugenii
ENSPPAG00000028523	SMARCA5	90	98.429	ENSOPRG00000014427	SMARCA5	87	98.429	Ochotona_princeps
ENSPPAG00000028523	SMARCA5	97	98.865	ENSOANG00000013921	SMARCA5	100	98.865	Ornithorhynchus_anatinus
ENSPPAG00000028523	SMARCA5	97	99.484	ENSOCUG00000013042	SMARCA5	100	99.484	Oryctolagus_cuniculus
ENSPPAG00000028523	SMARCA5	100	98.764	ENSOGAG00000009702	SMARCA5	100	98.764	Otolemur_garnettii
ENSPPAG00000028523	SMARCA5	99	99.093	ENSOARG00000010589	SMARCA5	99	98.287	Ovis_aries
ENSPPAG00000028523	SMARCA5	99	93.454	ENSPPRG00000004925	SMARCA5	98	93.714	Panthera_pardus
ENSPPAG00000028523	SMARCA5	99	99.396	ENSPTIG00000020959	SMARCA5	97	99.010	Panthera_tigris_altaica
ENSPPAG00000028523	SMARCA5	100	99.905	ENSPTRG00000016472	SMARCA5	100	99.905	Pan_troglodytes
ENSPPAG00000028523	SMARCA5	100	99.620	ENSPANG00000001175	SMARCA5	100	99.620	Papio_anubis
ENSPPAG00000028523	SMARCA5	98	91.104	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSPPAG00000028523	SMARCA5	98	90.676	ENSPKIG00000015699	SMARCA5	98	89.598	Paramormyrops_kingsleyae
ENSPPAG00000028523	SMARCA5	99	96.076	ENSPSIG00000004177	SMARCA5	100	96.088	Pelodiscus_sinensis
ENSPPAG00000028523	SMARCA5	97	90.329	ENSPMGG00000012316	SMARCA5	100	90.329	Periophthalmus_magnuspinnatus
ENSPPAG00000028523	SMARCA5	99	99.295	ENSPEMG00000008060	Smarca5	98	99.295	Peromyscus_maniculatus_bairdii
ENSPPAG00000028523	SMARCA5	99	70.783	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSPPAG00000028523	SMARCA5	64	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSPPAG00000028523	SMARCA5	99	98.792	ENSPCIG00000003926	SMARCA5	98	96.221	Phascolarctos_cinereus
ENSPPAG00000028523	SMARCA5	100	99.525	ENSPPYG00000015091	SMARCA5	100	99.525	Pongo_abelii
ENSPPAG00000028523	SMARCA5	84	95.667	ENSPCAG00000014230	SMARCA5	90	90.240	Procavia_capensis
ENSPPAG00000028523	SMARCA5	100	96.008	ENSPCOG00000026744	SMARCA5	100	96.008	Propithecus_coquereli
ENSPPAG00000028523	SMARCA5	99	99.295	ENSPVAG00000006482	SMARCA5	100	98.287	Pteropus_vampyrus
ENSPPAG00000028523	SMARCA5	99	90.010	ENSPNAG00000027824	SMARCA5	96	91.245	Pygocentrus_nattereri
ENSPPAG00000028523	SMARCA5	99	99.094	ENSRNOG00000018149	Smarca5	100	99.095	Rattus_norvegicus
ENSPPAG00000028523	SMARCA5	100	99.430	ENSRBIG00000044644	SMARCA5	100	99.430	Rhinopithecus_bieti
ENSPPAG00000028523	SMARCA5	99	99.799	ENSRROG00000029591	SMARCA5	99	99.799	Rhinopithecus_roxellana
ENSPPAG00000028523	SMARCA5	100	99.049	ENSSBOG00000036257	SMARCA5	100	99.049	Saimiri_boliviensis_boliviensis
ENSPPAG00000028523	SMARCA5	99	98.792	ENSSHAG00000008464	SMARCA5	100	98.792	Sarcophilus_harrisii
ENSPPAG00000028523	SMARCA5	99	90.679	ENSSFOG00015013252	SMARCA5	97	90.151	Scleropages_formosus
ENSPPAG00000028523	SMARCA5	99	96.364	ENSSPUG00000007604	SMARCA5	99	96.364	Sphenodon_punctatus
ENSPPAG00000028523	SMARCA5	99	99.396	ENSSSCG00000009047	SMARCA5	100	97.909	Sus_scrofa
ENSPPAG00000028523	SMARCA5	99	96.781	ENSTGUG00000002408	SMARCA5	99	96.781	Taeniopygia_guttata
ENSPPAG00000028523	SMARCA5	98	99.383	ENSUAMG00000023495	SMARCA5	99	98.643	Ursus_americanus
ENSPPAG00000028523	SMARCA5	99	99.396	ENSUMAG00000015324	SMARCA5	97	99.202	Ursus_maritimus
ENSPPAG00000028523	SMARCA5	100	98.099	ENSVPAG00000008982	SMARCA5	100	98.099	Vicugna_pacos
ENSPPAG00000028523	SMARCA5	100	98.574	ENSVVUG00000017473	SMARCA5	100	98.574	Vulpes_vulpes
ENSPPAG00000028523	SMARCA5	94	93.610	ENSXETG00000017566	smarca5	94	93.610	Xenopus_tropicalis