EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000028589 (Gene tree)
Gene ID: 100971281
Gene Symbol: -
Alias: -
Full Name: RAB11B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 13854 bases
Position: chr19:8526294-8540147
Accession: 100971281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000010768	MMR_HSR1	PF01926.23	4.2e-07	1	1
ENSPPAP00000010776	MMR_HSR1	PF01926.23	8.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000033430	-	666	-	ENSPPAP00000010776	221 (aa)	-	A0A2R9A0J9
ENSPPAT00000033422	-	1753	XM_003809977	ENSPPAP00000010768	218 (aa)	XP_003810025	A0A2R9A1Q0

Gene Model

Click here to download ENSPPAG00000028589's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps04144	Endocytosis	KEGG
pps04152	AMPK signaling pathway	KEGG
pps04962	Vasopressin-regulated water reabsorption	KEGG
pps05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000028589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000028589	-	78	41.765	ENSPPAG00000009152	RAB12	98	37.209
ENSPPAG00000028589	-	74	35.404	ENSPPAG00000042439	RAB6B	77	35.404
ENSPPAG00000028589	-	72	38.217	ENSPPAG00000011436	RAB6A	75	38.217
ENSPPAG00000028589	-	68	35.333	ENSPPAG00000028620	HRAS	85	36.420
ENSPPAG00000028589	-	80	49.425	ENSPPAG00000031759	RAB14	81	49.425
ENSPPAG00000028589	-	88	35.602	ENSPPAG00000010023	RAB23	80	35.602
ENSPPAG00000028589	-	77	39.884	ENSPPAG00000002892	RAB9B	86	39.884
ENSPPAG00000028589	-	75	33.136	ENSPPAG00000004422	RERG	83	33.136
ENSPPAG00000028589	-	95	48.387	ENSPPAG00000035840	RAB2B	99	48.387
ENSPPAG00000028589	-	63	30.070	ENSPPAG00000043156	ARL8B	70	30.070
ENSPPAG00000028589	-	94	43.689	ENSPPAG00000035431	RAB5B	91	43.689
ENSPPAG00000028589	-	72	35.443	ENSPPAG00000037915	NRAS	95	36.471
ENSPPAG00000028589	-	74	40.719	ENSPPAG00000024656	RAB9A	83	40.719
ENSPPAG00000028589	-	94	42.512	ENSPPAG00000037206	RAB5C	90	42.512
ENSPPAG00000028589	-	79	47.126	ENSPPAG00000041186	RAB39B	82	47.126
ENSPPAG00000028589	-	96	48.095	ENSPPAG00000041445	RAB1B	99	48.095
ENSPPAG00000028589	-	85	37.696	ENSPPAG00000043376	RAB33B	80	36.170
ENSPPAG00000028589	-	70	35.897	ENSPPAG00000037180	RAB34	60	35.897
ENSPPAG00000028589	-	72	43.949	ENSPPAG00000030833	RAB22A	81	43.949
ENSPPAG00000028589	-	81	40.331	ENSPPAG00000038245	RAB33A	75	40.331
ENSPPAG00000028589	-	94	34.247	ENSPPAG00000028079	RAB36	63	34.247
ENSPPAG00000028589	-	65	30.282	ENSPPAG00000031562	ARL8A	72	30.282
ENSPPAG00000028589	-	50	51.818	ENSPPAG00000037423	-	87	54.369
ENSPPAG00000028589	-	99	60.633	ENSPPAG00000031127	RAB25	99	60.633
ENSPPAG00000028589	-	55	30.894	ENSPPAG00000022226	ARL4A	60	30.894
ENSPPAG00000028589	-	96	39.524	ENSPPAG00000031604	RAB30	97	39.524
ENSPPAG00000028589	-	91	42.424	ENSPPAG00000028435	-	91	42.424
ENSPPAG00000028589	-	74	34.146	ENSPPAG00000031857	-	89	34.146
ENSPPAG00000028589	-	74	47.531	ENSPPAG00000041625	RAB18	78	47.531
ENSPPAG00000028589	-	94	43.204	ENSPPAG00000041763	RAB5A	91	43.204
ENSPPAG00000028589	-	78	32.941	ENSPPAG00000038418	KRAS	93	34.066
ENSPPAG00000028589	-	66	31.944	ENSPPAG00000033987	-	77	31.944
ENSPPAG00000028589	-	100	91.284	ENSPPAG00000030195	-	100	91.284
ENSPPAG00000028589	-	72	31.646	ENSPPAG00000036377	MRAS	82	33.140
ENSPPAG00000028589	-	96	46.411	ENSPPAG00000030253	RAB1A	99	46.411

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000028589	-	100	96.330	ENSAPOG00000023455	rab11bb	100	96.330	Acanthochromis_polyacanthus
ENSPPAG00000028589	-	100	83.945	ENSACIG00000019631	rab11bb	100	83.945	Amphilophus_citrinellus
ENSPPAG00000028589	-	100	96.789	ENSACIG00000024376	-	100	96.789	Amphilophus_citrinellus
ENSPPAG00000028589	-	100	96.789	ENSAOCG00000018849	-	100	96.789	Amphiprion_ocellaris
ENSPPAG00000028589	-	100	96.330	ENSAOCG00000018239	rab11bb	100	96.330	Amphiprion_ocellaris
ENSPPAG00000028589	-	100	96.330	ENSAPEG00000016590	rab11bb	100	96.330	Amphiprion_percula
ENSPPAG00000028589	-	100	96.330	ENSATEG00000023725	-	100	96.330	Anabas_testudineus
ENSPPAG00000028589	-	100	96.330	ENSATEG00000017696	rab11bb	100	96.330	Anabas_testudineus
ENSPPAG00000028589	-	96	97.608	ENSAPLG00000011046	-	96	97.608	Anas_platyrhynchos
ENSPPAG00000028589	-	100	96.330	ENSACLG00000007076	rab11bb	100	96.330	Astatotilapia_calliptera
ENSPPAG00000028589	-	100	96.789	ENSACLG00000005446	-	100	96.789	Astatotilapia_calliptera
ENSPPAG00000028589	-	100	97.706	ENSAMXG00000042655	rab11bb	100	97.706	Astyanax_mexicanus
ENSPPAG00000028589	-	100	96.789	ENSAMXG00000037623	-	100	96.789	Astyanax_mexicanus
ENSPPAG00000028589	-	100	100.000	ENSBTAG00000002475	RAB11B	100	100.000	Bos_taurus
ENSPPAG00000028589	-	96	98.086	ENSCHIG00000022426	-	92	99.512	Capra_hircus
ENSPPAG00000028589	-	100	100.000	ENSCATG00000029188	-	100	100.000	Cercocebus_atys
ENSPPAG00000028589	-	100	98.624	ENSCPBG00000017056	-	100	98.624	Chrysemys_picta_bellii
ENSPPAG00000028589	-	100	96.330	ENSCSEG00000007239	-	100	96.330	Cynoglossus_semilaevis
ENSPPAG00000028589	-	100	96.330	ENSCSEG00000012149	rab11bb	100	96.330	Cynoglossus_semilaevis
ENSPPAG00000028589	-	100	95.872	ENSCVAG00000019718	-	100	95.872	Cyprinodon_variegatus
ENSPPAG00000028589	-	100	96.330	ENSCVAG00000017021	-	100	96.330	Cyprinodon_variegatus
ENSPPAG00000028589	-	100	94.495	ENSCVAG00000019751	-	100	94.495	Cyprinodon_variegatus
ENSPPAG00000028589	-	100	96.789	ENSDARG00000090086	rab11bb	100	96.789	Danio_rerio
ENSPPAG00000028589	-	99	97.696	ENSETEG00000000905	-	99	97.696	Echinops_telfairi
ENSPPAG00000028589	-	99	96.279	ENSEASG00005003708	-	99	96.279	Equus_asinus_asinus
ENSPPAG00000028589	-	99	96.279	ENSECAG00000000716	RAB11B	99	96.279	Equus_caballus
ENSPPAG00000028589	-	100	96.330	ENSELUG00000021148	rab11bb	100	96.330	Esox_lucius
ENSPPAG00000028589	-	100	95.872	ENSELUG00000000916	-	100	95.872	Esox_lucius
ENSPPAG00000028589	-	100	95.872	ENSELUG00000020948	-	98	97.656	Esox_lucius
ENSPPAG00000028589	-	100	98.624	ENSFALG00000011828	-	100	98.624	Ficedula_albicollis
ENSPPAG00000028589	-	100	96.330	ENSFHEG00000022676	-	100	96.330	Fundulus_heteroclitus
ENSPPAG00000028589	-	100	96.330	ENSFHEG00000018353	rab11bb	100	96.330	Fundulus_heteroclitus
ENSPPAG00000028589	-	99	93.056	ENSGMOG00000009668	-	99	93.056	Gadus_morhua
ENSPPAG00000028589	-	100	96.330	ENSGMOG00000009211	rab11bb	100	96.330	Gadus_morhua
ENSPPAG00000028589	-	100	98.624	ENSGALG00000000613	RAB11B	100	98.624	Gallus_gallus
ENSPPAG00000028589	-	100	96.330	ENSGAFG00000007102	rab11bb	100	96.330	Gambusia_affinis
ENSPPAG00000028589	-	100	95.872	ENSGACG00000015479	rab11bb	100	95.872	Gasterosteus_aculeatus
ENSPPAG00000028589	-	100	94.495	ENSGACG00000013297	-	99	94.495	Gasterosteus_aculeatus
ENSPPAG00000028589	-	100	100.000	ENSGGOG00000014516	RAB11B	100	100.000	Gorilla_gorilla
ENSPPAG00000028589	-	100	96.330	ENSHBUG00000014777	rab11bb	100	96.330	Haplochromis_burtoni
ENSPPAG00000028589	-	100	96.789	ENSHBUG00000009947	-	100	96.789	Haplochromis_burtoni
ENSPPAG00000028589	-	100	94.495	ENSHCOG00000000954	-	100	94.495	Hippocampus_comes
ENSPPAG00000028589	-	100	96.789	ENSHCOG00000002423	rab11bb	100	96.789	Hippocampus_comes
ENSPPAG00000028589	-	100	91.743	ENSHCOG00000000985	-	100	91.743	Hippocampus_comes
ENSPPAG00000028589	-	100	97.248	ENSIPUG00000025100	rab11b	100	97.248	Ictalurus_punctatus
ENSPPAG00000028589	-	100	97.248	ENSIPUG00000019927	rab11bb	100	97.248	Ictalurus_punctatus
ENSPPAG00000028589	-	100	96.330	ENSKMAG00000009033	rab11bb	100	96.330	Kryptolebias_marmoratus
ENSPPAG00000028589	-	100	96.789	ENSKMAG00000006170	-	100	96.789	Kryptolebias_marmoratus
ENSPPAG00000028589	-	100	95.872	ENSLBEG00000015248	rab11bb	100	95.872	Labrus_bergylta
ENSPPAG00000028589	-	100	88.991	ENSLBEG00000005981	-	100	88.991	Labrus_bergylta
ENSPPAG00000028589	-	100	96.330	ENSLBEG00000004172	-	100	96.330	Labrus_bergylta
ENSPPAG00000028589	-	100	98.624	ENSLACG00000016857	-	100	98.624	Latimeria_chalumnae
ENSPPAG00000028589	-	100	100.000	ENSMFAG00000003654	RAB11B	100	100.000	Macaca_fascicularis
ENSPPAG00000028589	-	100	100.000	ENSMLEG00000030601	-	100	100.000	Mandrillus_leucophaeus
ENSPPAG00000028589	-	100	95.413	ENSMAMG00000018533	-	100	95.413	Mastacembelus_armatus
ENSPPAG00000028589	-	100	95.872	ENSMAMG00000006378	rab11bb	100	95.872	Mastacembelus_armatus
ENSPPAG00000028589	-	100	96.789	ENSMZEG00005010975	-	100	96.789	Maylandia_zebra
ENSPPAG00000028589	-	100	96.330	ENSMZEG00005003352	rab11bb	100	96.330	Maylandia_zebra
ENSPPAG00000028589	-	100	100.000	ENSMICG00000034065	-	100	100.000	Microcebus_murinus
ENSPPAG00000028589	-	100	96.789	ENSMMOG00000001250	-	100	96.789	Mola_mola
ENSPPAG00000028589	-	94	97.073	ENSMMOG00000007917	rab11bb	100	97.073	Mola_mola
ENSPPAG00000028589	-	99	95.392	ENSMMOG00000001238	-	99	95.392	Mola_mola
ENSPPAG00000028589	-	100	98.624	ENSMODG00000003841	-	100	98.624	Monodelphis_domestica
ENSPPAG00000028589	-	100	96.330	ENSMALG00000022187	rab11bb	100	96.330	Monopterus_albus
ENSPPAG00000028589	-	94	90.821	ENSMLUG00000006677	-	100	90.821	Myotis_lucifugus
ENSPPAG00000028589	-	100	96.330	ENSNBRG00000000372	rab11bb	100	96.330	Neolamprologus_brichardi
ENSPPAG00000028589	-	100	96.789	ENSNBRG00000023885	-	100	96.789	Neolamprologus_brichardi
ENSPPAG00000028589	-	100	98.624	ENSMEUG00000003686	-	100	98.624	Notamacropus_eugenii
ENSPPAG00000028589	-	100	96.330	ENSONIG00000010435	rab11bb	100	96.330	Oreochromis_niloticus
ENSPPAG00000028589	-	100	96.789	ENSONIG00000002544	-	100	96.789	Oreochromis_niloticus
ENSPPAG00000028589	-	50	97.248	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSPPAG00000028589	-	99	95.853	ENSORLG00000015284	-	72	95.853	Oryzias_latipes
ENSPPAG00000028589	-	100	95.872	ENSORLG00000013938	rab11bb	100	95.872	Oryzias_latipes
ENSPPAG00000028589	-	100	95.872	ENSORLG00020019393	rab11bb	100	95.872	Oryzias_latipes_hni
ENSPPAG00000028589	-	99	95.853	ENSORLG00020020844	RAB11B	99	95.853	Oryzias_latipes_hni
ENSPPAG00000028589	-	99	95.853	ENSORLG00015016999	RAB11B	99	95.853	Oryzias_latipes_hsok
ENSPPAG00000028589	-	100	95.872	ENSORLG00015020173	rab11bb	100	95.872	Oryzias_latipes_hsok
ENSPPAG00000028589	-	100	96.330	ENSOMEG00000017806	-	100	96.330	Oryzias_melastigma
ENSPPAG00000028589	-	100	96.789	ENSOMEG00000002562	-	100	96.789	Oryzias_melastigma
ENSPPAG00000028589	-	100	100.000	ENSPTRG00000010422	RAB11B	100	100.000	Pan_troglodytes
ENSPPAG00000028589	-	100	100.000	ENSPANG00000007765	-	100	100.000	Papio_anubis
ENSPPAG00000028589	-	100	97.706	ENSPKIG00000011703	-	100	97.706	Paramormyrops_kingsleyae
ENSPPAG00000028589	-	98	97.664	ENSPKIG00000001389	-	69	97.664	Paramormyrops_kingsleyae
ENSPPAG00000028589	-	100	96.330	ENSPKIG00000011640	rab11bb	100	96.330	Paramormyrops_kingsleyae
ENSPPAG00000028589	-	98	93.151	ENSPSIG00000010242	-	85	93.151	Pelodiscus_sinensis
ENSPPAG00000028589	-	100	96.330	ENSPMGG00000009435	rab11bb	100	96.330	Periophthalmus_magnuspinnatus
ENSPPAG00000028589	-	100	94.954	ENSPMGG00000014333	-	100	94.954	Periophthalmus_magnuspinnatus
ENSPPAG00000028589	-	99	92.627	ENSPMGG00000014336	-	99	92.627	Periophthalmus_magnuspinnatus
ENSPPAG00000028589	-	97	96.226	ENSPCIG00000020371	-	99	96.226	Phascolarctos_cinereus
ENSPPAG00000028589	-	100	96.789	ENSPFOG00000006224	-	100	96.789	Poecilia_formosa
ENSPPAG00000028589	-	100	96.330	ENSPFOG00000024114	-	100	96.330	Poecilia_formosa
ENSPPAG00000028589	-	100	96.330	ENSPLAG00000001598	rab11bb	100	96.330	Poecilia_latipinna
ENSPPAG00000028589	-	100	96.789	ENSPLAG00000014207	-	100	96.789	Poecilia_latipinna
ENSPPAG00000028589	-	100	96.789	ENSPMEG00000007842	-	100	96.789	Poecilia_mexicana
ENSPPAG00000028589	-	100	96.330	ENSPMEG00000012389	rab11bb	100	96.330	Poecilia_mexicana
ENSPPAG00000028589	-	100	96.330	ENSPREG00000014269	rab11bb	100	96.330	Poecilia_reticulata
ENSPPAG00000028589	-	100	96.330	ENSPREG00000006336	-	100	96.330	Poecilia_reticulata
ENSPPAG00000028589	-	100	96.330	ENSPNYG00000004098	rab11bb	100	96.330	Pundamilia_nyererei
ENSPPAG00000028589	-	100	96.789	ENSPNYG00000019611	-	100	96.789	Pundamilia_nyererei
ENSPPAG00000028589	-	100	100.000	ENSRROG00000037812	-	100	100.000	Rhinopithecus_roxellana
ENSPPAG00000028589	-	97	96.698	ENSSHAG00000006816	-	99	94.931	Sarcophilus_harrisii
ENSPPAG00000028589	-	100	97.706	ENSSFOG00015009042	rab11bb	100	97.706	Scleropages_formosus
ENSPPAG00000028589	-	100	72.936	ENSSFOG00015006245	-	100	72.936	Scleropages_formosus
ENSPPAG00000028589	-	100	93.119	ENSSMAG00000018613	-	100	93.119	Scophthalmus_maximus
ENSPPAG00000028589	-	100	95.872	ENSSMAG00000004922	rab11bb	100	95.872	Scophthalmus_maximus
ENSPPAG00000028589	-	100	96.330	ENSSDUG00000013558	rab11bb	100	96.330	Seriola_dumerili
ENSPPAG00000028589	-	100	96.789	ENSSDUG00000002934	-	100	96.789	Seriola_dumerili
ENSPPAG00000028589	-	100	96.789	ENSSLDG00000005275	-	100	96.789	Seriola_lalandi_dorsalis
ENSPPAG00000028589	-	100	96.330	ENSSLDG00000020676	rab11bb	100	96.330	Seriola_lalandi_dorsalis
ENSPPAG00000028589	-	100	98.165	ENSSPUG00000002243	-	100	98.165	Sphenodon_punctatus
ENSPPAG00000028589	-	100	96.330	ENSSPAG00000011419	rab11bb	100	96.330	Stegastes_partitus
ENSPPAG00000028589	-	100	96.789	ENSSPAG00000014559	-	100	96.789	Stegastes_partitus
ENSPPAG00000028589	-	100	98.624	ENSTGUG00000000084	-	100	98.624	Taeniopygia_guttata
ENSPPAG00000028589	-	100	96.330	ENSTRUG00000022029	rab11bb	100	96.330	Takifugu_rubripes
ENSPPAG00000028589	-	99	96.759	ENSTRUG00000021619	-	100	96.759	Takifugu_rubripes
ENSPPAG00000028589	-	99	94.470	ENSTRUG00000021614	-	99	94.470	Takifugu_rubripes
ENSPPAG00000028589	-	100	95.413	ENSTNIG00000011081	rab11bb	100	95.413	Tetraodon_nigroviridis
ENSPPAG00000028589	-	99	96.759	ENSTNIG00000013182	-	100	96.759	Tetraodon_nigroviridis
ENSPPAG00000028589	-	99	94.009	ENSTNIG00000013184	-	99	94.009	Tetraodon_nigroviridis
ENSPPAG00000028589	-	93	95.074	ENSTNIG00000002003	-	100	95.074	Tetraodon_nigroviridis
ENSPPAG00000028589	-	94	100.000	ENSUAMG00000006639	-	99	100.000	Ursus_americanus
ENSPPAG00000028589	-	100	97.260	ENSXETG00000025484	rab11b.1	99	97.260	Xenopus_tropicalis
ENSPPAG00000028589	-	100	96.330	ENSXCOG00000008042	-	100	96.330	Xiphophorus_couchianus
ENSPPAG00000028589	-	100	96.789	ENSXCOG00000009190	-	100	96.789	Xiphophorus_couchianus
ENSPPAG00000028589	-	100	96.330	ENSXMAG00000011926	rab11bb	100	96.330	Xiphophorus_maculatus
ENSPPAG00000028589	-	100	96.330	ENSXMAG00000024840	-	100	96.330	Xiphophorus_maculatus