EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000028866 (Gene tree)
Gene ID: 100991758
Gene Symbol: PABPN1L
Alias: -
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 3440 bases
Position: chr16:89234156-89237595
Accession: 100991758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000011302	RRM_1	PF00076.22	6.9e-15	1	1
ENSPPAP00000011303	RRM_1	PF00076.22	5.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000033958	PABPN1L-202	1215	XM_008974709	ENSPPAP00000011303	255 (aa)	XP_008972957	A0A2R9A227
ENSPPAT00000033957	PABPN1L-201	1303	XM_003805771	ENSPPAP00000011302	278 (aa)	XP_003805819	A0A2R9A204

Gene Model

Click here to download ENSPPAG00000028866's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03015	mRNA surveillance pathway	KEGG
pps05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000028866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000028866	PABPN1L	52	53.947	ENSPPAG00000039421	-	85	53.947
ENSPPAG00000028866	PABPN1L	50	60.145	ENSPPAG00000028984	BCL2L2-PABPN1	73	60.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000028866	PABPN1L	100	98.431	ENSG00000205022	PABPN1L	100	98.431	Homo_sapiens
ENSPPAG00000028866	PABPN1L	51	58.741	ENSACIG00000021400	PABPN1L	85	55.901	Amphilophus_citrinellus
ENSPPAG00000028866	PABPN1L	70	58.763	ENSACAG00000013250	PABPN1L	99	58.763	Anolis_carolinensis
ENSPPAG00000028866	PABPN1L	100	81.655	ENSANAG00000038178	PABPN1L	100	81.295	Aotus_nancymaae
ENSPPAG00000028866	PABPN1L	72	50.000	ENSACLG00000025147	PABPN1L	71	51.244	Astatotilapia_calliptera
ENSPPAG00000028866	PABPN1L	58	56.875	ENSAMXG00000010873	PABPN1L	71	53.968	Astyanax_mexicanus
ENSPPAG00000028866	PABPN1L	51	78.014	ENSBTAG00000006727	-	86	78.014	Bos_taurus
ENSPPAG00000028866	PABPN1L	100	65.603	ENSBTAG00000023752	-	100	65.603	Bos_taurus
ENSPPAG00000028866	PABPN1L	100	81.295	ENSCJAG00000045284	PABPN1L	100	82.374	Callithrix_jacchus
ENSPPAG00000028866	PABPN1L	99	63.509	ENSCHIG00000013987	PABPN1L	100	60.269	Capra_hircus
ENSPPAG00000028866	PABPN1L	95	65.809	ENSCAPG00000007240	PABPN1L	100	65.934	Cavia_aperea
ENSPPAG00000028866	PABPN1L	100	67.626	ENSCPOG00000025951	PABPN1L	100	67.742	Cavia_porcellus
ENSPPAG00000028866	PABPN1L	100	82.014	ENSCCAG00000027631	PABPN1L	100	82.374	Cebus_capucinus
ENSPPAG00000028866	PABPN1L	100	91.727	ENSCATG00000031060	PABPN1L	100	90.647	Cercocebus_atys
ENSPPAG00000028866	PABPN1L	100	70.968	ENSCLAG00000000704	PABPN1L	100	69.176	Chinchilla_lanigera
ENSPPAG00000028866	PABPN1L	100	85.374	ENSCSAG00000002881	PABPN1L	100	85.374	Chlorocebus_sabaeus
ENSPPAG00000028866	PABPN1L	70	57.143	ENSCPBG00000023441	PABPN1L	61	58.883	Chrysemys_picta_bellii
ENSPPAG00000028866	PABPN1L	100	88.489	ENSCANG00000039336	PABPN1L	100	89.209	Colobus_angolensis_palliatus
ENSPPAG00000028866	PABPN1L	100	73.477	ENSCGRG00001013211	Pabpn1l	100	73.118	Cricetulus_griseus_chok1gshd
ENSPPAG00000028866	PABPN1L	100	73.477	ENSCGRG00000015868	Pabpn1l	100	73.118	Cricetulus_griseus_crigri
ENSPPAG00000028866	PABPN1L	58	53.988	ENSCSEG00000001142	pabpn1l	72	52.308	Cynoglossus_semilaevis
ENSPPAG00000028866	PABPN1L	100	61.131	ENSDNOG00000034677	PABPN1L	100	60.424	Dasypus_novemcinctus
ENSPPAG00000028866	PABPN1L	100	71.277	ENSEASG00005000777	PABPN1L	100	70.213	Equus_asinus_asinus
ENSPPAG00000028866	PABPN1L	100	71.986	ENSECAG00000000378	PABPN1L	100	70.922	Equus_caballus
ENSPPAG00000028866	PABPN1L	100	59.140	ENSEEUG00000004747	PABPN1L	100	57.914	Erinaceus_europaeus
ENSPPAG00000028866	PABPN1L	64	54.237	ENSELUG00000018385	PABPN1L	63	56.805	Esox_lucius
ENSPPAG00000028866	PABPN1L	100	70.213	ENSFCAG00000010465	PABPN1L	100	69.751	Felis_catus
ENSPPAG00000028866	PABPN1L	72	54.726	ENSFALG00000003319	PABPN1L	80	54.229	Ficedula_albicollis
ENSPPAG00000028866	PABPN1L	100	69.176	ENSFDAG00000021067	PABPN1L	100	67.986	Fukomys_damarensis
ENSPPAG00000028866	PABPN1L	58	53.374	ENSFHEG00000018295	PABPN1L	71	51.485	Fundulus_heteroclitus
ENSPPAG00000028866	PABPN1L	54	55.333	ENSGMOG00000001475	PABPN1L	68	54.839	Gadus_morhua
ENSPPAG00000028866	PABPN1L	54	66.000	ENSGALG00000006242	PABPN1L	88	64.935	Gallus_gallus
ENSPPAG00000028866	PABPN1L	58	52.096	ENSGACG00000015428	PABPN1L	72	51.220	Gasterosteus_aculeatus
ENSPPAG00000028866	PABPN1L	65	58.889	ENSGAGG00000010613	PABPN1L	59	58.889	Gopherus_agassizii
ENSPPAG00000028866	PABPN1L	100	93.525	ENSGGOG00000012670	PABPN1L	100	92.806	Gorilla_gorilla
ENSPPAG00000028866	PABPN1L	72	49.000	ENSHBUG00000002388	PABPN1L	71	51.244	Haplochromis_burtoni
ENSPPAG00000028866	PABPN1L	96	68.045	ENSHGLG00000014207	PABPN1L	100	68.539	Heterocephalus_glaber_female
ENSPPAG00000028866	PABPN1L	96	68.045	ENSHGLG00100005230	PABPN1L	100	68.539	Heterocephalus_glaber_male
ENSPPAG00000028866	PABPN1L	62	51.445	ENSHCOG00000004151	PABPN1L	72	51.208	Hippocampus_comes
ENSPPAG00000028866	PABPN1L	58	54.938	ENSIPUG00000023583	PABPN1L	90	54.211	Ictalurus_punctatus
ENSPPAG00000028866	PABPN1L	100	67.742	ENSSTOG00000020814	PABPN1L	100	67.742	Ictidomys_tridecemlineatus
ENSPPAG00000028866	PABPN1L	100	68.571	ENSJJAG00000006433	Pabpn1l	100	67.384	Jaculus_jaculus
ENSPPAG00000028866	PABPN1L	58	53.374	ENSLBEG00000011647	PABPN1L	69	52.475	Labrus_bergylta
ENSPPAG00000028866	PABPN1L	70	65.816	ENSLAFG00000025902	-	78	65.816	Loxodonta_africana
ENSPPAG00000028866	PABPN1L	100	92.446	ENSMFAG00000002924	PABPN1L	100	91.367	Macaca_fascicularis
ENSPPAG00000028866	PABPN1L	100	91.727	ENSMMUG00000012438	PABPN1L	100	90.647	Macaca_mulatta
ENSPPAG00000028866	PABPN1L	100	92.446	ENSMNEG00000044808	PABPN1L	100	91.367	Macaca_nemestrina
ENSPPAG00000028866	PABPN1L	100	92.086	ENSMLEG00000032667	PABPN1L	100	91.007	Mandrillus_leucophaeus
ENSPPAG00000028866	PABPN1L	72	50.000	ENSMZEG00005002186	PABPN1L	71	51.244	Maylandia_zebra
ENSPPAG00000028866	PABPN1L	100	68.345	ENSMAUG00000014032	Pabpn1l	100	68.539	Mesocricetus_auratus
ENSPPAG00000028866	PABPN1L	100	77.419	ENSMICG00000028179	PABPN1L	100	76.344	Microcebus_murinus
ENSPPAG00000028866	PABPN1L	100	67.742	ENSMOCG00000007955	Pabpn1l	100	67.742	Microtus_ochrogaster
ENSPPAG00000028866	PABPN1L	100	53.546	ENSMODG00000003873	-	100	52.482	Monodelphis_domestica
ENSPPAG00000028866	PABPN1L	60	53.571	ENSMALG00000016926	PABPN1L	71	50.500	Monopterus_albus
ENSPPAG00000028866	PABPN1L	100	66.667	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	66.308	Mus_caroli
ENSPPAG00000028866	PABPN1L	100	66.308	ENSMUSG00000069867	Pabpn1l	100	65.950	Mus_musculus
ENSPPAG00000028866	PABPN1L	100	67.025	MGP_PahariEiJ_G0023268	Pabpn1l	100	66.667	Mus_pahari
ENSPPAG00000028866	PABPN1L	100	65.950	MGP_SPRETEiJ_G0032788	Pabpn1l	100	65.591	Mus_spretus
ENSPPAG00000028866	PABPN1L	96	51.237	ENSMLUG00000003228	PABPN1L	95	50.883	Myotis_lucifugus
ENSPPAG00000028866	PABPN1L	100	71.685	ENSNGAG00000023992	Pabpn1l	100	70.251	Nannospalax_galili
ENSPPAG00000028866	PABPN1L	100	69.534	ENSOPRG00000005597	PABPN1L	100	67.857	Ochotona_princeps
ENSPPAG00000028866	PABPN1L	100	62.671	ENSODEG00000004649	PABPN1L	100	62.329	Octodon_degus
ENSPPAG00000028866	PABPN1L	100	51.971	ENSOANG00000013901	PABPN1L	100	51.613	Ornithorhynchus_anatinus
ENSPPAG00000028866	PABPN1L	72	51.244	ENSORLG00000026560	PABPN1L	71	51.244	Oryzias_latipes
ENSPPAG00000028866	PABPN1L	72	51.244	ENSORLG00020015068	PABPN1L	71	51.244	Oryzias_latipes_hni
ENSPPAG00000028866	PABPN1L	72	51.244	ENSORLG00015000397	PABPN1L	71	51.244	Oryzias_latipes_hsok
ENSPPAG00000028866	PABPN1L	75	50.952	ENSOMEG00000017896	PABPN1L	51	52.736	Oryzias_melastigma
ENSPPAG00000028866	PABPN1L	100	75.269	ENSOGAG00000000433	PABPN1L	100	74.910	Otolemur_garnettii
ENSPPAG00000028866	PABPN1L	100	64.379	ENSOARG00000013682	PABPN1L	100	64.379	Ovis_aries
ENSPPAG00000028866	PABPN1L	100	70.922	ENSPPRG00000015106	PABPN1L	100	70.107	Panthera_pardus
ENSPPAG00000028866	PABPN1L	93	64.615	ENSPTIG00000015606	PABPN1L	100	63.707	Panthera_tigris_altaica
ENSPPAG00000028866	PABPN1L	100	100.000	ENSPTRG00000031120	PABPN1L	100	100.000	Pan_troglodytes
ENSPPAG00000028866	PABPN1L	100	91.727	ENSPANG00000026039	PABPN1L	100	90.647	Papio_anubis
ENSPPAG00000028866	PABPN1L	69	55.051	ENSPSIG00000003404	PABPN1L	100	56.566	Pelodiscus_sinensis
ENSPPAG00000028866	PABPN1L	100	70.251	ENSPEMG00000016624	Pabpn1l	100	69.534	Peromyscus_maniculatus_bairdii
ENSPPAG00000028866	PABPN1L	51	63.194	ENSPCIG00000007038	-	100	63.194	Phascolarctos_cinereus
ENSPPAG00000028866	PABPN1L	58	43.939	ENSPFOG00000007001	PABPN1L	89	43.103	Poecilia_formosa
ENSPPAG00000028866	PABPN1L	100	94.964	ENSPPYG00000007655	PABPN1L	100	94.964	Pongo_abelii
ENSPPAG00000028866	PABPN1L	100	73.022	ENSPCOG00000024077	PABPN1L	100	73.477	Propithecus_coquereli
ENSPPAG00000028866	PABPN1L	100	69.858	ENSPVAG00000002716	PABPN1L	100	69.858	Pteropus_vampyrus
ENSPPAG00000028866	PABPN1L	72	50.000	ENSPNYG00000004803	PABPN1L	71	51.244	Pundamilia_nyererei
ENSPPAG00000028866	PABPN1L	100	69.892	ENSRNOG00000029558	Pabpn1l	100	69.534	Rattus_norvegicus
ENSPPAG00000028866	PABPN1L	100	92.086	ENSRBIG00000030740	PABPN1L	100	91.007	Rhinopithecus_bieti
ENSPPAG00000028866	PABPN1L	100	91.367	ENSRROG00000032240	-	100	90.288	Rhinopithecus_roxellana
ENSPPAG00000028866	PABPN1L	99	91.697	ENSRROG00000035483	-	99	90.253	Rhinopithecus_roxellana
ENSPPAG00000028866	PABPN1L	100	82.374	ENSSBOG00000018410	PABPN1L	100	83.094	Saimiri_boliviensis_boliviensis
ENSPPAG00000028866	PABPN1L	100	52.685	ENSSHAG00000010001	-	100	52.349	Sarcophilus_harrisii
ENSPPAG00000028866	PABPN1L	59	55.215	ENSSMAG00000021348	PABPN1L	72	51.942	Scophthalmus_maximus
ENSPPAG00000028866	PABPN1L	58	53.704	ENSSDUG00000006986	PABPN1L	71	50.500	Seriola_dumerili
ENSPPAG00000028866	PABPN1L	58	54.321	ENSSLDG00000021845	PABPN1L	71	51.000	Seriola_lalandi_dorsalis
ENSPPAG00000028866	PABPN1L	94	49.237	ENSSARG00000005178	-	99	47.909	Sorex_araneus
ENSPPAG00000028866	PABPN1L	69	58.549	ENSSPUG00000007031	PABPN1L	84	58.763	Sphenodon_punctatus
ENSPPAG00000028866	PABPN1L	72	50.746	ENSSPAG00000017978	PABPN1L	71	51.707	Stegastes_partitus
ENSPPAG00000028866	PABPN1L	100	67.730	ENSSSCG00000036367	PABPN1L	100	68.440	Sus_scrofa
ENSPPAG00000028866	PABPN1L	58	54.167	ENSTRUG00000024725	PABPN1L	81	51.675	Takifugu_rubripes
ENSPPAG00000028866	PABPN1L	100	68.683	ENSTTRG00000004691	PABPN1L	100	69.504	Tursiops_truncatus
ENSPPAG00000028866	PABPN1L	59	54.706	ENSXETG00000011258	pabpn1l	96	52.315	Xenopus_tropicalis