EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000029023 (Gene tree)
Gene ID: 100974483
Gene Symbol: TDP2
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 17696 bases
Position: chr6:24819494-24837189
Accession: 100974483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000011651	Exo_endo_phos	PF03372.23	1.1e-08	1	1
ENSPPAP00000011639	Exo_endo_phos	PF03372.23	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000034299	TDP2-201	2124	XM_003823199	ENSPPAP00000011639	362 (aa)	XP_003823247	A0A2R9A444
ENSPPAT00000034311	TDP2-202	909	-	ENSPPAP00000011651	302 (aa)	-	A0A2R9A8B6

Gene Model

Click here to download ENSPPAG00000029023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000029023's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000029023	TDP2	100	99.448	ENSG00000111802	TDP2	100	99.448	Homo_sapiens
ENSPPAG00000029023	TDP2	87	53.585	ENSAPOG00000018379	-	91	53.585	Acanthochromis_polyacanthus
ENSPPAG00000029023	TDP2	92	86.738	ENSAMEG00000010230	TDP2	99	87.050	Ailuropoda_melanoleuca
ENSPPAG00000029023	TDP2	61	52.717	ENSAOCG00000010081	-	81	52.717	Amphiprion_ocellaris
ENSPPAG00000029023	TDP2	96	49.660	ENSAPEG00000004208	-	99	49.660	Amphiprion_percula
ENSPPAG00000029023	TDP2	90	47.080	ENSATEG00000010663	-	89	47.080	Anabas_testudineus
ENSPPAG00000029023	TDP2	92	67.986	ENSACAG00000002332	TDP2	92	65.976	Anolis_carolinensis
ENSPPAG00000029023	TDP2	100	91.436	ENSANAG00000020033	TDP2	100	91.436	Aotus_nancymaae
ENSPPAG00000029023	TDP2	92	47.687	ENSACLG00000016174	tdp2b	95	47.872	Astatotilapia_calliptera
ENSPPAG00000029023	TDP2	92	48.043	ENSACLG00000016132	tdp2b	95	48.227	Astatotilapia_calliptera
ENSPPAG00000029023	TDP2	89	53.333	ENSACLG00000016148	tdp2b	95	53.333	Astatotilapia_calliptera
ENSPPAG00000029023	TDP2	93	56.429	ENSAMXG00000011775	tdp2b	95	51.934	Astyanax_mexicanus
ENSPPAG00000029023	TDP2	91	48.410	ENSAMXG00000036549	tdp2a	92	48.410	Astyanax_mexicanus
ENSPPAG00000029023	TDP2	94	86.006	ENSBTAG00000000365	TDP2	94	86.006	Bos_taurus
ENSPPAG00000029023	TDP2	90	30.699	WBGene00013405	tdpt-1	85	30.699	Caenorhabditis_elegans
ENSPPAG00000029023	TDP2	100	90.331	ENSCJAG00000021963	-	100	90.331	Callithrix_jacchus
ENSPPAG00000029023	TDP2	100	91.713	ENSCJAG00000006074	TDP2	100	91.713	Callithrix_jacchus
ENSPPAG00000029023	TDP2	92	88.087	ENSCAFG00000010428	TDP2	99	85.588	Canis_familiaris
ENSPPAG00000029023	TDP2	92	87.814	ENSCAFG00020009994	TDP2	96	88.129	Canis_lupus_dingo
ENSPPAG00000029023	TDP2	96	84.983	ENSCHIG00000015294	-	98	84.983	Capra_hircus
ENSPPAG00000029023	TDP2	92	90.647	ENSTSYG00000037199	TDP2	100	89.320	Carlito_syrichta
ENSPPAG00000029023	TDP2	100	85.912	ENSCPOG00000006390	TDP2	95	87.097	Cavia_porcellus
ENSPPAG00000029023	TDP2	100	93.370	ENSCCAG00000022734	TDP2	100	93.370	Cebus_capucinus
ENSPPAG00000029023	TDP2	100	95.395	ENSCATG00000022076	TDP2	100	95.395	Cercocebus_atys
ENSPPAG00000029023	TDP2	100	84.254	ENSCLAG00000002072	TDP2	95	86.510	Chinchilla_lanigera
ENSPPAG00000029023	TDP2	100	95.304	ENSCSAG00000007769	TDP2	100	95.304	Chlorocebus_sabaeus
ENSPPAG00000029023	TDP2	92	73.022	ENSCPBG00000006551	TDP2	87	69.501	Chrysemys_picta_bellii
ENSPPAG00000029023	TDP2	100	95.050	ENSCANG00000040122	TDP2	100	95.050	Colobus_angolensis_palliatus
ENSPPAG00000029023	TDP2	92	73.741	ENSCGRG00001000384	Tdp2	92	69.208	Cricetulus_griseus_chok1gshd
ENSPPAG00000029023	TDP2	93	73.214	ENSCGRG00000010250	Tdp2	94	67.155	Cricetulus_griseus_crigri
ENSPPAG00000029023	TDP2	92	55.160	ENSCVAG00000003114	tdp2b	95	53.143	Cyprinodon_variegatus
ENSPPAG00000029023	TDP2	94	54.608	ENSDARG00000035954	tdp2b	95	51.507	Danio_rerio
ENSPPAG00000029023	TDP2	85	47.692	ENSDARG00000069941	tdp2a	58	47.692	Danio_rerio
ENSPPAG00000029023	TDP2	100	85.635	ENSDNOG00000044082	TDP2	93	87.977	Dasypus_novemcinctus
ENSPPAG00000029023	TDP2	92	86.331	ENSETEG00000019096	TDP2	100	86.331	Echinops_telfairi
ENSPPAG00000029023	TDP2	87	53.008	ENSEBUG00000006535	tdp2a	62	53.008	Eptatretus_burgeri
ENSPPAG00000029023	TDP2	94	87.683	ENSEASG00005007656	TDP2	94	87.683	Equus_asinus_asinus
ENSPPAG00000029023	TDP2	94	87.683	ENSECAG00000014264	TDP2	94	87.683	Equus_caballus
ENSPPAG00000029023	TDP2	100	80.387	ENSEEUG00000010776	TDP2	94	81.818	Erinaceus_europaeus
ENSPPAG00000029023	TDP2	89	47.601	ENSELUG00000009321	tdp2a	92	45.608	Esox_lucius
ENSPPAG00000029023	TDP2	91	54.704	ENSELUG00000016449	tdp2b	95	53.039	Esox_lucius
ENSPPAG00000029023	TDP2	100	84.807	ENSFCAG00000025612	TDP2	94	86.510	Felis_catus
ENSPPAG00000029023	TDP2	92	64.388	ENSFALG00000004710	TDP2	94	59.942	Ficedula_albicollis
ENSPPAG00000029023	TDP2	92	88.530	ENSFDAG00000006512	TDP2	97	88.571	Fukomys_damarensis
ENSPPAG00000029023	TDP2	81	52.016	ENSFHEG00000013560	-	84	52.016	Fundulus_heteroclitus
ENSPPAG00000029023	TDP2	92	70.144	ENSGALG00000013637	TDP2	92	64.912	Gallus_gallus
ENSPPAG00000029023	TDP2	95	72.125	ENSGAGG00000002853	TDP2	87	69.795	Gopherus_agassizii
ENSPPAG00000029023	TDP2	100	98.895	ENSGGOG00000014237	TDP2	100	98.895	Gorilla_gorilla
ENSPPAG00000029023	TDP2	67	56.436	ENSHBUG00000005421	-	83	57.711	Haplochromis_burtoni
ENSPPAG00000029023	TDP2	93	55.674	ENSHBUG00000002714	tdp2b	95	54.179	Haplochromis_burtoni
ENSPPAG00000029023	TDP2	100	84.254	ENSHGLG00000008655	TDP2	95	85.044	Heterocephalus_glaber_female
ENSPPAG00000029023	TDP2	100	84.254	ENSHGLG00100019087	TDP2	95	85.044	Heterocephalus_glaber_male
ENSPPAG00000029023	TDP2	94	53.186	ENSIPUG00000013691	tdp2b	94	53.541	Ictalurus_punctatus
ENSPPAG00000029023	TDP2	93	70.107	ENSJJAG00000021685	Tdp2	97	66.272	Jaculus_jaculus
ENSPPAG00000029023	TDP2	85	50.575	ENSKMAG00000015485	-	84	50.575	Kryptolebias_marmoratus
ENSPPAG00000029023	TDP2	92	64.029	ENSLACG00000008852	TDP2	95	59.143	Latimeria_chalumnae
ENSPPAG00000029023	TDP2	91	57.971	ENSLOCG00000005817	tdp2b	98	57.971	Lepisosteus_oculatus
ENSPPAG00000029023	TDP2	94	86.804	ENSLAFG00000002567	TDP2	97	86.804	Loxodonta_africana
ENSPPAG00000029023	TDP2	100	95.724	ENSMFAG00000045296	TDP2	100	95.724	Macaca_fascicularis
ENSPPAG00000029023	TDP2	100	94.475	ENSMMUG00000009803	TDP2	100	94.475	Macaca_mulatta
ENSPPAG00000029023	TDP2	100	95.395	ENSMNEG00000038003	TDP2	100	95.395	Macaca_nemestrina
ENSPPAG00000029023	TDP2	100	95.724	ENSMLEG00000028883	TDP2	100	95.724	Mandrillus_leucophaeus
ENSPPAG00000029023	TDP2	91	55.755	ENSMAMG00000013654	tdp2b	94	54.386	Mastacembelus_armatus
ENSPPAG00000029023	TDP2	85	48.462	ENSMZEG00005004103	tdp2b	87	48.462	Maylandia_zebra
ENSPPAG00000029023	TDP2	98	47.826	ENSMZEG00005004126	tdp2b	95	48.936	Maylandia_zebra
ENSPPAG00000029023	TDP2	93	54.965	ENSMZEG00005003950	tdp2b	95	53.602	Maylandia_zebra
ENSPPAG00000029023	TDP2	83	47.012	ENSMZEG00005003980	-	82	46.850	Maylandia_zebra
ENSPPAG00000029023	TDP2	87	53.008	ENSMZEG00005004153	tdp2b	91	53.008	Maylandia_zebra
ENSPPAG00000029023	TDP2	83	52.381	ENSMZEG00005004055	tdp2b	83	52.381	Maylandia_zebra
ENSPPAG00000029023	TDP2	90	51.636	ENSMZEG00005004077	tdp2b	96	50.709	Maylandia_zebra
ENSPPAG00000029023	TDP2	94	69.718	ENSMGAG00000008014	TDP2	91	65.982	Meleagris_gallopavo
ENSPPAG00000029023	TDP2	92	73.022	ENSMAUG00000014451	Tdp2	92	68.328	Mesocricetus_auratus
ENSPPAG00000029023	TDP2	100	88.981	ENSMICG00000000039	TDP2	100	87.459	Microcebus_murinus
ENSPPAG00000029023	TDP2	92	74.820	ENSMOCG00000002823	Tdp2	92	70.381	Microtus_ochrogaster
ENSPPAG00000029023	TDP2	89	65.152	ENSMODG00000011653	TDP2	95	67.203	Monodelphis_domestica
ENSPPAG00000029023	TDP2	97	47.635	ENSMALG00000005368	-	97	47.635	Monopterus_albus
ENSPPAG00000029023	TDP2	92	74.101	MGP_CAROLIEiJ_G0018354	Tdp2	91	68.035	Mus_caroli
ENSPPAG00000029023	TDP2	92	75.180	ENSMUSG00000035958	Tdp2	91	68.915	Mus_musculus
ENSPPAG00000029023	TDP2	92	74.101	MGP_PahariEiJ_G0019417	Tdp2	91	67.155	Mus_pahari
ENSPPAG00000029023	TDP2	92	74.820	MGP_SPRETEiJ_G0019220	Tdp2	91	68.622	Mus_spretus
ENSPPAG00000029023	TDP2	92	88.489	ENSMPUG00000004516	TDP2	95	84.548	Mustela_putorius_furo
ENSPPAG00000029023	TDP2	93	81.560	ENSMLUG00000013506	TDP2	94	77.647	Myotis_lucifugus
ENSPPAG00000029023	TDP2	95	68.531	ENSNGAG00000001375	Tdp2	92	65.588	Nannospalax_galili
ENSPPAG00000029023	TDP2	100	98.066	ENSNLEG00000002447	TDP2	100	98.066	Nomascus_leucogenys
ENSPPAG00000029023	TDP2	95	86.458	ENSOPRG00000016299	TDP2	97	84.751	Ochotona_princeps
ENSPPAG00000029023	TDP2	97	88.356	ENSODEG00000014018	TDP2	99	88.356	Octodon_degus
ENSPPAG00000029023	TDP2	98	85.028	ENSOCUG00000013773	TDP2	94	86.217	Oryctolagus_cuniculus
ENSPPAG00000029023	TDP2	87	48.315	ENSORLG00000001661	-	97	48.315	Oryzias_latipes
ENSPPAG00000029023	TDP2	87	48.315	ENSORLG00020004634	-	97	48.315	Oryzias_latipes_hni
ENSPPAG00000029023	TDP2	87	44.195	ENSORLG00015008190	-	97	44.195	Oryzias_latipes_hsok
ENSPPAG00000029023	TDP2	87	46.792	ENSOMEG00000015899	-	92	49.597	Oryzias_melastigma
ENSPPAG00000029023	TDP2	100	85.359	ENSOGAG00000025303	TDP2	93	87.097	Otolemur_garnettii
ENSPPAG00000029023	TDP2	100	84.254	ENSPPRG00000015398	TDP2	94	85.924	Panthera_pardus
ENSPPAG00000029023	TDP2	99	83.389	ENSPTIG00000018574	TDP2	95	87.410	Panthera_tigris_altaica
ENSPPAG00000029023	TDP2	100	100.000	ENSPTRG00000017778	TDP2	100	100.000	Pan_troglodytes
ENSPPAG00000029023	TDP2	100	94.737	ENSPANG00000017590	TDP2	100	94.737	Papio_anubis
ENSPPAG00000029023	TDP2	93	53.659	ENSPKIG00000006483	tdp2b	94	51.989	Paramormyrops_kingsleyae
ENSPPAG00000029023	TDP2	95	70.035	ENSPSIG00000004948	TDP2	100	70.307	Pelodiscus_sinensis
ENSPPAG00000029023	TDP2	92	74.820	ENSPEMG00000001788	Tdp2	91	70.088	Peromyscus_maniculatus_bairdii
ENSPPAG00000029023	TDP2	82	47.529	ENSPMAG00000001570	tdp2b	96	47.529	Petromyzon_marinus
ENSPPAG00000029023	TDP2	95	71.280	ENSPCIG00000007316	TDP2	89	68.328	Phascolarctos_cinereus
ENSPPAG00000029023	TDP2	82	50.400	ENSPFOG00000017990	-	90	50.400	Poecilia_formosa
ENSPPAG00000029023	TDP2	82	50.000	ENSPLAG00000019439	-	79	50.000	Poecilia_latipinna
ENSPPAG00000029023	TDP2	82	50.800	ENSPMEG00000010824	-	94	46.528	Poecilia_mexicana
ENSPPAG00000029023	TDP2	100	97.790	ENSPPYG00000016282	TDP2	92	97.790	Pongo_abelii
ENSPPAG00000029023	TDP2	100	90.608	ENSPCOG00000021415	TDP2	100	90.608	Propithecus_coquereli
ENSPPAG00000029023	TDP2	93	53.901	ENSPNYG00000011532	tdp2b	95	52.738	Pundamilia_nyererei
ENSPPAG00000029023	TDP2	69	48.792	ENSPNYG00000001944	-	83	48.792	Pundamilia_nyererei
ENSPPAG00000029023	TDP2	87	49.291	ENSPNYG00000011504	tdp2b	90	49.291	Pundamilia_nyererei
ENSPPAG00000029023	TDP2	93	46.599	ENSPNAG00000022162	tdp2a	66	50.385	Pygocentrus_nattereri
ENSPPAG00000029023	TDP2	95	71.777	ENSRNOG00000018246	Tdp2	92	68.328	Rattus_norvegicus
ENSPPAG00000029023	TDP2	100	94.719	ENSRBIG00000037119	TDP2	100	94.719	Rhinopithecus_bieti
ENSPPAG00000029023	TDP2	100	94.389	ENSRROG00000005025	TDP2	100	94.389	Rhinopithecus_roxellana
ENSPPAG00000029023	TDP2	100	91.713	ENSSBOG00000028734	TDP2	100	91.118	Saimiri_boliviensis_boliviensis
ENSPPAG00000029023	TDP2	92	73.022	ENSSHAG00000002506	TDP2	91	67.836	Sarcophilus_harrisii
ENSPPAG00000029023	TDP2	84	53.036	ENSSFOG00015011322	-	71	53.571	Scleropages_formosus
ENSPPAG00000029023	TDP2	92	79.570	ENSSARG00000013547	TDP2	100	79.570	Sorex_araneus
ENSPPAG00000029023	TDP2	94	65.143	ENSSPUG00000008288	TDP2	95	65.143	Sphenodon_punctatus
ENSPPAG00000029023	TDP2	100	86.464	ENSSSCG00000001092	TDP2	94	87.977	Sus_scrofa
ENSPPAG00000029023	TDP2	86	68.582	ENSTGUG00000009035	TDP2	100	68.582	Taeniopygia_guttata
ENSPPAG00000029023	TDP2	94	54.895	ENSTRUG00000014347	tdp2b	96	53.541	Takifugu_rubripes
ENSPPAG00000029023	TDP2	98	48.993	ENSTRUG00000012218	-	97	48.993	Takifugu_rubripes
ENSPPAG00000029023	TDP2	83	54.023	ENSTNIG00000010260	TDP2	99	54.023	Tetraodon_nigroviridis
ENSPPAG00000029023	TDP2	96	52.342	ENSTNIG00000017792	tdp2b	96	52.958	Tetraodon_nigroviridis
ENSPPAG00000029023	TDP2	100	84.530	ENSTTRG00000016376	TDP2	94	86.510	Tursiops_truncatus
ENSPPAG00000029023	TDP2	97	84.247	ENSUAMG00000025939	TDP2	95	80.645	Ursus_americanus
ENSPPAG00000029023	TDP2	92	86.738	ENSUMAG00000020111	TDP2	93	87.050	Ursus_maritimus
ENSPPAG00000029023	TDP2	94	65.263	ENSXETG00000014826	tdp2	95	61.864	Xenopus_tropicalis
ENSPPAG00000029023	TDP2	82	50.996	ENSXCOG00000010778	-	69	50.996	Xiphophorus_couchianus
ENSPPAG00000029023	TDP2	82	50.996	ENSXMAG00000022252	-	72	50.996	Xiphophorus_maculatus