EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000029147 (Gene tree)
Gene ID: 100976703
Gene Symbol: DDX56
Alias: -
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 7895 bases
Position: chr7:45349800-45357694
Accession: 100976703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000011895	ResIII	PF04851.15	1.1e-07	1	1
ENSPPAP00000011895	DEAD	PF00270.29	1.8e-34	1	1
ENSPPAP00000011899	DEAD	PF00270.29	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000034561	DDX56-202	312	-	ENSPPAP00000011899	103 (aa)	-	A0A2R9A4V0
ENSPPAT00000034557	DDX56-201	1671	XM_003846093	ENSPPAP00000011895	556 (aa)	XP_003846141	A0A2R9A8D4

Gene Model

Click here to download ENSPPAG00000029147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000029147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000029147	DDX56	57	40.678	ENSPPAG00000035131	-	70	33.529
ENSPPAG00000029147	DDX56	58	41.667	ENSPPAG00000040065	DDX39A	72	31.100
ENSPPAG00000029147	DDX56	69	47.887	ENSPPAG00000039793	DDX47	71	45.000
ENSPPAG00000029147	DDX56	57	45.763	ENSPPAG00000040387	-	58	39.216
ENSPPAG00000029147	DDX56	54	55.357	ENSPPAG00000028453	DDX52	58	30.829
ENSPPAG00000029147	DDX56	68	49.180	ENSPPAG00000027432	DDX1	54	49.180
ENSPPAG00000029147	DDX56	60	48.387	ENSPPAG00000035217	DDX49	78	38.298
ENSPPAG00000029147	DDX56	66	48.529	ENSPPAG00000035843	DDX27	52	30.365
ENSPPAG00000029147	DDX56	54	46.429	ENSPPAG00000039963	-	51	38.043
ENSPPAG00000029147	DDX56	100	76.882	ENSPPAG00000031263	-	100	76.703

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000029147	DDX56	100	99.029	ENSG00000136271	DDX56	100	99.029	Homo_sapiens
ENSPPAG00000029147	DDX56	98	61.525	ENSAPOG00000017113	ddx56	98	61.879	Acanthochromis_polyacanthus
ENSPPAG00000029147	DDX56	100	87.050	ENSAMEG00000017711	DDX56	100	87.050	Ailuropoda_melanoleuca
ENSPPAG00000029147	DDX56	92	57.225	ENSACIG00000013747	ddx56	94	64.000	Amphilophus_citrinellus
ENSPPAG00000029147	DDX56	97	61.455	ENSAOCG00000018059	ddx56	99	61.455	Amphiprion_ocellaris
ENSPPAG00000029147	DDX56	88	63.984	ENSAOCG00000015447	-	87	63.984	Amphiprion_ocellaris
ENSPPAG00000029147	DDX56	99	61.092	ENSAPEG00000007267	ddx56	99	61.092	Amphiprion_percula
ENSPPAG00000029147	DDX56	98	61.101	ENSATEG00000005279	ddx56	98	61.854	Anabas_testudineus
ENSPPAG00000029147	DDX56	98	61.525	ENSACLG00000020113	ddx56	98	62.057	Astatotilapia_calliptera
ENSPPAG00000029147	DDX56	98	57.801	ENSAMXG00000019357	ddx56	99	58.156	Astyanax_mexicanus
ENSPPAG00000029147	DDX56	100	88.849	ENSBTAG00000010602	DDX56	100	88.849	Bos_taurus
ENSPPAG00000029147	DDX56	96	40.141	WBGene00016073	C24H12.4	86	40.141	Caenorhabditis_elegans
ENSPPAG00000029147	DDX56	100	96.117	ENSCJAG00000012233	DDX56	100	96.117	Callithrix_jacchus
ENSPPAG00000029147	DDX56	82	85.746	ENSCAFG00000029295	DDX56	100	85.746	Canis_familiaris
ENSPPAG00000029147	DDX56	100	83.303	ENSCAFG00020019695	DDX56	100	83.303	Canis_lupus_dingo
ENSPPAG00000029147	DDX56	100	88.489	ENSCHIG00000014261	DDX56	100	88.489	Capra_hircus
ENSPPAG00000029147	DDX56	100	92.086	ENSTSYG00000008048	DDX56	100	92.086	Carlito_syrichta
ENSPPAG00000029147	DDX56	87	85.270	ENSCAPG00000006286	DDX56	100	85.270	Cavia_aperea
ENSPPAG00000029147	DDX56	100	86.331	ENSCPOG00000003359	DDX56	100	86.331	Cavia_porcellus
ENSPPAG00000029147	DDX56	100	92.446	ENSCCAG00000025303	DDX56	100	92.446	Cebus_capucinus
ENSPPAG00000029147	DDX56	100	98.058	ENSCATG00000039389	DDX56	100	98.058	Cercocebus_atys
ENSPPAG00000029147	DDX56	100	88.489	ENSCLAG00000007666	DDX56	100	88.489	Chinchilla_lanigera
ENSPPAG00000029147	DDX56	100	94.604	ENSCSAG00000015636	DDX56	100	94.604	Chlorocebus_sabaeus
ENSPPAG00000029147	DDX56	97	66.184	ENSCPBG00000024556	DDX56	97	66.184	Chrysemys_picta_bellii
ENSPPAG00000029147	DDX56	91	53.801	ENSCING00000005185	-	97	53.996	Ciona_intestinalis
ENSPPAG00000029147	DDX56	91	52.140	ENSCSAVG00000011266	-	99	52.140	Ciona_savignyi
ENSPPAG00000029147	DDX56	100	98.058	ENSCANG00000028187	DDX56	100	98.058	Colobus_angolensis_palliatus
ENSPPAG00000029147	DDX56	100	87.050	ENSCGRG00001019019	Ddx56	100	87.050	Cricetulus_griseus_chok1gshd
ENSPPAG00000029147	DDX56	100	87.050	ENSCGRG00000011870	Ddx56	100	87.050	Cricetulus_griseus_crigri
ENSPPAG00000029147	DDX56	98	61.593	ENSCSEG00000008368	ddx56	98	61.947	Cynoglossus_semilaevis
ENSPPAG00000029147	DDX56	98	61.896	ENSCVAG00000006499	ddx56	98	62.032	Cyprinodon_variegatus
ENSPPAG00000029147	DDX56	98	60.644	ENSDARG00000020913	ddx56	98	61.717	Danio_rerio
ENSPPAG00000029147	DDX56	87	86.100	ENSDNOG00000036526	DDX56	99	86.100	Dasypus_novemcinctus
ENSPPAG00000029147	DDX56	73	94.667	ENSDORG00000026173	-	96	92.697	Dipodomys_ordii
ENSPPAG00000029147	DDX56	92	48.155	FBgn0001565	Hlc	89	48.155	Drosophila_melanogaster
ENSPPAG00000029147	DDX56	87	58.471	ENSETEG00000019559	-	100	57.645	Echinops_telfairi
ENSPPAG00000029147	DDX56	68	97.143	ENSETEG00000002969	-	83	76.145	Echinops_telfairi
ENSPPAG00000029147	DDX56	98	56.429	ENSEBUG00000009986	ddx56	99	57.321	Eptatretus_burgeri
ENSPPAG00000029147	DDX56	100	88.669	ENSEASG00005017795	DDX56	100	89.568	Equus_asinus_asinus
ENSPPAG00000029147	DDX56	100	88.669	ENSECAG00000019897	DDX56	100	89.568	Equus_caballus
ENSPPAG00000029147	DDX56	87	87.137	ENSEEUG00000004849	DDX56	100	87.137	Erinaceus_europaeus
ENSPPAG00000029147	DDX56	97	62.816	ENSELUG00000004150	ddx56	97	63.016	Esox_lucius
ENSPPAG00000029147	DDX56	99	86.306	ENSFCAG00000010261	DDX56	99	86.667	Felis_catus
ENSPPAG00000029147	DDX56	100	87.950	ENSFDAG00000007128	DDX56	100	87.950	Fukomys_damarensis
ENSPPAG00000029147	DDX56	98	61.091	ENSFHEG00000018008	ddx56	95	65.286	Fundulus_heteroclitus
ENSPPAG00000029147	DDX56	97	59.489	ENSGAFG00000006906	ddx56	97	59.489	Gambusia_affinis
ENSPPAG00000029147	DDX56	94	67.803	ENSGAGG00000006789	DDX56	93	67.803	Gopherus_agassizii
ENSPPAG00000029147	DDX56	100	100.000	ENSGGOG00000012031	DDX56	100	100.000	Gorilla_gorilla
ENSPPAG00000029147	DDX56	92	59.538	ENSHBUG00000015246	ddx56	92	59.429	Haplochromis_burtoni
ENSPPAG00000029147	DDX56	100	87.770	ENSHGLG00000017271	DDX56	100	87.770	Heterocephalus_glaber_female
ENSPPAG00000029147	DDX56	100	87.770	ENSHGLG00100015731	DDX56	100	87.770	Heterocephalus_glaber_male
ENSPPAG00000029147	DDX56	97	61.636	ENSHCOG00000001685	ddx56	97	61.636	Hippocampus_comes
ENSPPAG00000029147	DDX56	98	59.894	ENSIPUG00000006602	ddx56	97	59.894	Ictalurus_punctatus
ENSPPAG00000029147	DDX56	100	88.309	ENSSTOG00000000464	DDX56	100	88.309	Ictidomys_tridecemlineatus
ENSPPAG00000029147	DDX56	99	87.138	ENSJJAG00000014269	Ddx56	100	87.138	Jaculus_jaculus
ENSPPAG00000029147	DDX56	97	60.915	ENSKMAG00000016611	ddx56	98	62.321	Kryptolebias_marmoratus
ENSPPAG00000029147	DDX56	98	60.958	ENSLBEG00000026281	ddx56	98	61.029	Labrus_bergylta
ENSPPAG00000029147	DDX56	97	63.949	ENSLACG00000015551	DDX56	97	64.286	Latimeria_chalumnae
ENSPPAG00000029147	DDX56	99	60.413	ENSLOCG00000015185	ddx56	99	61.217	Lepisosteus_oculatus
ENSPPAG00000029147	DDX56	99	87.840	ENSLAFG00000018206	DDX56	99	87.840	Loxodonta_africana
ENSPPAG00000029147	DDX56	100	98.058	ENSMFAG00000041001	DDX56	100	98.058	Macaca_fascicularis
ENSPPAG00000029147	DDX56	100	97.087	ENSMMUG00000002645	DDX56	100	97.087	Macaca_mulatta
ENSPPAG00000029147	DDX56	100	98.058	ENSMNEG00000028492	DDX56	100	98.058	Macaca_nemestrina
ENSPPAG00000029147	DDX56	100	98.058	ENSMLEG00000043591	DDX56	100	98.058	Mandrillus_leucophaeus
ENSPPAG00000029147	DDX56	97	61.964	ENSMAMG00000007776	ddx56	98	61.770	Mastacembelus_armatus
ENSPPAG00000029147	DDX56	98	61.525	ENSMZEG00005009813	ddx56	98	62.057	Maylandia_zebra
ENSPPAG00000029147	DDX56	80	86.585	ENSMAUG00000019569	-	89	91.026	Mesocricetus_auratus
ENSPPAG00000029147	DDX56	100	91.187	ENSMICG00000005550	DDX56	100	91.187	Microcebus_murinus
ENSPPAG00000029147	DDX56	100	87.050	ENSMOCG00000016782	Ddx56	100	87.050	Microtus_ochrogaster
ENSPPAG00000029147	DDX56	90	64.833	ENSMMOG00000009654	ddx56	94	65.422	Mola_mola
ENSPPAG00000029147	DDX56	100	75.045	ENSMODG00000016137	DDX56	100	75.045	Monodelphis_domestica
ENSPPAG00000029147	DDX56	68	77.143	ENSMALG00000016910	ddx56	99	60.836	Monopterus_albus
ENSPPAG00000029147	DDX56	100	86.871	MGP_CAROLIEiJ_G0016069	Ddx56	100	86.871	Mus_caroli
ENSPPAG00000029147	DDX56	100	86.871	ENSMUSG00000004393	Ddx56	100	86.871	Mus_musculus
ENSPPAG00000029147	DDX56	100	86.691	MGP_PahariEiJ_G0016822	Ddx56	100	86.691	Mus_pahari
ENSPPAG00000029147	DDX56	100	86.871	MGP_SPRETEiJ_G0016911	Ddx56	100	86.871	Mus_spretus
ENSPPAG00000029147	DDX56	100	86.511	ENSMPUG00000018196	DDX56	88	86.511	Mustela_putorius_furo
ENSPPAG00000029147	DDX56	100	87.590	ENSMLUG00000003509	DDX56	100	87.770	Myotis_lucifugus
ENSPPAG00000029147	DDX56	100	88.129	ENSNGAG00000018785	Ddx56	100	88.129	Nannospalax_galili
ENSPPAG00000029147	DDX56	92	61.328	ENSNBRG00000002656	ddx56	92	60.811	Neolamprologus_brichardi
ENSPPAG00000029147	DDX56	100	100.000	ENSNLEG00000003816	DDX56	100	100.000	Nomascus_leucogenys
ENSPPAG00000029147	DDX56	91	73.861	ENSMEUG00000006788	DDX56	100	73.861	Notamacropus_eugenii
ENSPPAG00000029147	DDX56	100	86.331	ENSOPRG00000000292	-	100	86.331	Ochotona_princeps
ENSPPAG00000029147	DDX56	73	93.333	ENSODEG00000014807	DDX56	100	89.323	Octodon_degus
ENSPPAG00000029147	DDX56	98	63.004	ENSONIG00000011509	ddx56	98	63.004	Oreochromis_niloticus
ENSPPAG00000029147	DDX56	50	75.180	ENSOANG00000010592	-	99	75.180	Ornithorhynchus_anatinus
ENSPPAG00000029147	DDX56	71	83.562	ENSOANG00000015987	-	95	66.262	Ornithorhynchus_anatinus
ENSPPAG00000029147	DDX56	67	88.406	ENSOANG00000020827	-	100	74.312	Ornithorhynchus_anatinus
ENSPPAG00000029147	DDX56	97	66.421	ENSOANG00000006320	-	100	67.159	Ornithorhynchus_anatinus
ENSPPAG00000029147	DDX56	100	87.410	ENSOCUG00000022918	DDX56	100	87.410	Oryctolagus_cuniculus
ENSPPAG00000029147	DDX56	97	63.423	ENSORLG00000001434	ddx56	97	63.423	Oryzias_latipes
ENSPPAG00000029147	DDX56	98	62.811	ENSORLG00020015718	ddx56	95	62.811	Oryzias_latipes_hni
ENSPPAG00000029147	DDX56	97	63.423	ENSORLG00015003004	ddx56	93	63.423	Oryzias_latipes_hsok
ENSPPAG00000029147	DDX56	97	62.950	ENSOMEG00000022072	ddx56	97	63.129	Oryzias_melastigma
ENSPPAG00000029147	DDX56	100	90.468	ENSOGAG00000009981	DDX56	100	90.468	Otolemur_garnettii
ENSPPAG00000029147	DDX56	100	88.669	ENSOARG00000015240	DDX56	100	88.669	Ovis_aries
ENSPPAG00000029147	DDX56	99	86.126	ENSPPRG00000014594	DDX56	99	86.126	Panthera_pardus
ENSPPAG00000029147	DDX56	87	83.368	ENSPTIG00000019500	DDX56	92	83.784	Panthera_tigris_altaica
ENSPPAG00000029147	DDX56	94	78.937	ENSPTRG00000052765	-	100	78.748	Pan_troglodytes
ENSPPAG00000029147	DDX56	100	100.000	ENSPTRG00000019147	DDX56	100	100.000	Pan_troglodytes
ENSPPAG00000029147	DDX56	100	97.087	ENSPANG00000002446	DDX56	100	97.087	Papio_anubis
ENSPPAG00000029147	DDX56	98	61.717	ENSPKIG00000018998	ddx56	98	61.717	Paramormyrops_kingsleyae
ENSPPAG00000029147	DDX56	97	61.722	ENSPMGG00000017421	ddx56	99	61.722	Periophthalmus_magnuspinnatus
ENSPPAG00000029147	DDX56	75	92.208	ENSPEMG00000018351	-	96	80.315	Peromyscus_maniculatus_bairdii
ENSPPAG00000029147	DDX56	100	81.105	ENSPCIG00000009336	DDX56	100	81.105	Phascolarctos_cinereus
ENSPPAG00000029147	DDX56	97	61.828	ENSPFOG00000018658	ddx56	97	62.254	Poecilia_formosa
ENSPPAG00000029147	DDX56	97	61.828	ENSPLAG00000019208	ddx56	97	62.254	Poecilia_latipinna
ENSPPAG00000029147	DDX56	97	61.828	ENSPMEG00000001775	ddx56	97	62.254	Poecilia_mexicana
ENSPPAG00000029147	DDX56	97	61.792	ENSPREG00000015142	ddx56	97	61.792	Poecilia_reticulata
ENSPPAG00000029147	DDX56	100	95.144	ENSPPYG00000017591	DDX56	100	95.144	Pongo_abelii
ENSPPAG00000029147	DDX56	96	86.567	ENSPCAG00000011499	DDX56	100	86.567	Procavia_capensis
ENSPPAG00000029147	DDX56	100	91.906	ENSPCOG00000024864	DDX56	100	91.906	Propithecus_coquereli
ENSPPAG00000029147	DDX56	89	83.482	ENSPVAG00000000791	DDX56	88	83.482	Pteropus_vampyrus
ENSPPAG00000029147	DDX56	98	61.348	ENSPNYG00000019212	ddx56	98	61.879	Pundamilia_nyererei
ENSPPAG00000029147	DDX56	98	61.243	ENSPNAG00000025446	ddx56	99	61.609	Pygocentrus_nattereri
ENSPPAG00000029147	DDX56	100	87.410	ENSRNOG00000004670	Ddx56	100	87.410	Rattus_norvegicus
ENSPPAG00000029147	DDX56	100	98.058	ENSRBIG00000030140	DDX56	100	98.058	Rhinopithecus_bieti
ENSPPAG00000029147	DDX56	100	97.087	ENSRROG00000044428	DDX56	100	97.087	Rhinopithecus_roxellana
ENSPPAG00000029147	DDX56	97	40.978	YLR276C	-	98	41.315	Saccharomyces_cerevisiae
ENSPPAG00000029147	DDX56	100	92.806	ENSSBOG00000034339	DDX56	100	92.806	Saimiri_boliviensis_boliviensis
ENSPPAG00000029147	DDX56	85	80.462	ENSSHAG00000016615	DDX56	98	80.462	Sarcophilus_harrisii
ENSPPAG00000029147	DDX56	98	62.724	ENSSFOG00015012795	ddx56	98	62.724	Scleropages_formosus
ENSPPAG00000029147	DDX56	97	61.676	ENSSMAG00000011280	ddx56	98	61.854	Scophthalmus_maximus
ENSPPAG00000029147	DDX56	98	61.131	ENSSDUG00000023597	ddx56	98	62.367	Seriola_dumerili
ENSPPAG00000029147	DDX56	98	61.131	ENSSLDG00000018369	ddx56	98	62.367	Seriola_lalandi_dorsalis
ENSPPAG00000029147	DDX56	74	89.714	ENSSARG00000014363	DDX56	79	88.398	Sorex_araneus
ENSPPAG00000029147	DDX56	99	65.771	ENSSPUG00000000784	DDX56	96	65.771	Sphenodon_punctatus
ENSPPAG00000029147	DDX56	92	64.299	ENSSPAG00000009392	ddx56	96	63.771	Stegastes_partitus
ENSPPAG00000029147	DDX56	100	87.634	ENSSSCG00000016745	DDX56	100	88.351	Sus_scrofa
ENSPPAG00000029147	DDX56	66	69.118	ENSTGUG00000016252	-	99	69.118	Taeniopygia_guttata
ENSPPAG00000029147	DDX56	99	61.733	ENSTRUG00000018623	ddx56	99	61.733	Takifugu_rubripes
ENSPPAG00000029147	DDX56	98	59.194	ENSTNIG00000013593	ddx56	99	59.545	Tetraodon_nigroviridis
ENSPPAG00000029147	DDX56	100	89.029	ENSTBEG00000007119	DDX56	100	89.029	Tupaia_belangeri
ENSPPAG00000029147	DDX56	87	86.722	ENSTTRG00000010552	DDX56	100	86.722	Tursiops_truncatus
ENSPPAG00000029147	DDX56	100	87.410	ENSUAMG00000014194	DDX56	100	87.410	Ursus_americanus
ENSPPAG00000029147	DDX56	100	87.410	ENSUMAG00000009666	DDX56	100	87.410	Ursus_maritimus
ENSPPAG00000029147	DDX56	72	97.297	ENSVPAG00000000136	-	58	97.297	Vicugna_pacos
ENSPPAG00000029147	DDX56	100	86.511	ENSVVUG00000011905	DDX56	100	86.511	Vulpes_vulpes
ENSPPAG00000029147	DDX56	98	62.903	ENSXETG00000019000	ddx56	99	63.978	Xenopus_tropicalis
ENSPPAG00000029147	DDX56	97	61.439	ENSXCOG00000017413	ddx56	97	61.439	Xiphophorus_couchianus
ENSPPAG00000029147	DDX56	97	61.441	ENSXMAG00000018749	ddx56	97	61.441	Xiphophorus_maculatus