EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000029572 (Gene tree)
Gene ID: 100970578
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 94526 bases
Position: chr8:92939535-93034060
Accession: 100970231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000012803	ResIII	PF04851.15	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000035476	-	354	-	ENSPPAP00000012810	117 (aa)	-	A0A2R9A7D8
ENSPPAT00000035475	-	5393	XM_003821103	ENSPPAP00000012809	299 (aa)	XP_003821151	A0A2R9A673
ENSPPAT00000035469	-	2691	XM_003821102	ENSPPAP00000012803	896 (aa)	XP_003821150	A0A2R9A683

Gene Model

Click here to download ENSPPAG00000029572's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000029572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000029572	-	63	46.010	ENSPPAG00000031222	RAD54L	77	46.010
ENSPPAG00000029572	-	53	31.507	ENSPPAG00000001726	HELLS	67	31.507
ENSPPAG00000029572	-	59	31.115	ENSPPAG00000035061	ERCC6L2	82	31.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000029572	-	100	97.582	ENSG00000197275	RAD54B	100	97.600	Homo_sapiens
ENSPPAG00000029572	-	79	97.383	ENSG00000265817	FSBP	100	97.383	Homo_sapiens
ENSPPAG00000029572	-	99	86.044	ENSAMEG00000005834	-	99	86.044	Ailuropoda_melanoleuca
ENSPPAG00000029572	-	99	54.039	ENSACIG00000013005	rad54b	99	54.039	Amphilophus_citrinellus
ENSPPAG00000029572	-	99	53.575	ENSAOCG00000008523	rad54b	99	53.575	Amphiprion_ocellaris
ENSPPAG00000029572	-	99	53.493	ENSAPEG00000001673	rad54b	99	53.603	Amphiprion_percula
ENSPPAG00000029572	-	99	52.890	ENSATEG00000001527	rad54b	99	52.890	Anabas_testudineus
ENSPPAG00000029572	-	99	68.702	ENSAPLG00000014366	-	99	68.702	Anas_platyrhynchos
ENSPPAG00000029572	-	87	69.849	ENSACAG00000003671	-	99	69.849	Anolis_carolinensis
ENSPPAG00000029572	-	71	92.604	ENSANAG00000019528	-	100	92.604	Aotus_nancymaae
ENSPPAG00000029572	-	99	53.057	ENSACLG00000007826	rad54b	99	53.057	Astatotilapia_calliptera
ENSPPAG00000029572	-	86	55.501	ENSAMXG00000039985	rad54b	97	55.270	Astyanax_mexicanus
ENSPPAG00000029572	-	99	84.048	ENSBTAG00000000632	RAD54B	99	84.048	Bos_taurus
ENSPPAG00000029572	-	79	34.037	WBGene00013792	Y116A8C.13	98	32.448	Caenorhabditis_elegans
ENSPPAG00000029572	-	100	93.194	ENSCJAG00000000080	-	100	94.490	Callithrix_jacchus
ENSPPAG00000029572	-	99	83.736	ENSCAFG00000009179	RAD54B	99	83.736	Canis_familiaris
ENSPPAG00000029572	-	99	83.626	ENSCAFG00020012084	-	99	83.626	Canis_lupus_dingo
ENSPPAG00000029572	-	99	83.498	ENSCHIG00000008230	-	99	83.498	Capra_hircus
ENSPPAG00000029572	-	99	88.229	ENSTSYG00000013234	-	99	88.229	Carlito_syrichta
ENSPPAG00000029572	-	99	83.150	ENSCPOG00000011643	-	99	83.150	Cavia_porcellus
ENSPPAG00000029572	-	100	92.975	ENSCCAG00000011754	-	100	94.353	Cebus_capucinus
ENSPPAG00000029572	-	100	95.714	ENSCATG00000030661	-	100	96.281	Cercocebus_atys
ENSPPAG00000029572	-	100	83.205	ENSCLAG00000010476	-	100	83.205	Chinchilla_lanigera
ENSPPAG00000029572	-	100	95.275	ENSCSAG00000012712	-	100	95.275	Chlorocebus_sabaeus
ENSPPAG00000029572	-	100	69.631	ENSCPBG00000003204	-	99	70.130	Chrysemys_picta_bellii
ENSPPAG00000029572	-	100	95.495	ENSCANG00000017939	-	100	95.868	Colobus_angolensis_palliatus
ENSPPAG00000029572	-	99	78.218	ENSCGRG00001020184	Rad54b	99	78.218	Cricetulus_griseus_chok1gshd
ENSPPAG00000029572	-	99	76.788	ENSCGRG00000016752	Rad54b	99	76.788	Cricetulus_griseus_crigri
ENSPPAG00000029572	-	95	55.774	ENSCSEG00000001601	rad54b	99	55.774	Cynoglossus_semilaevis
ENSPPAG00000029572	-	99	54.902	ENSCVAG00000009200	rad54b	99	54.902	Cyprinodon_variegatus
ENSPPAG00000029572	-	99	52.136	ENSDARG00000092134	rad54b	99	58.769	Danio_rerio
ENSPPAG00000029572	-	99	83.680	ENSDNOG00000015535	-	99	83.680	Dasypus_novemcinctus
ENSPPAG00000029572	-	99	83.407	ENSDORG00000002492	Rad54b	99	83.407	Dipodomys_ordii
ENSPPAG00000029572	-	86	80.735	ENSETEG00000010605	-	100	80.735	Echinops_telfairi
ENSPPAG00000029572	-	99	45.590	ENSEBUG00000009104	rad54b	99	45.668	Eptatretus_burgeri
ENSPPAG00000029572	-	97	85.051	ENSEASG00005004021	-	99	85.051	Equus_asinus_asinus
ENSPPAG00000029572	-	99	85.714	ENSECAG00000021949	-	99	85.714	Equus_caballus
ENSPPAG00000029572	-	84	81.132	ENSEEUG00000008056	-	83	81.132	Erinaceus_europaeus
ENSPPAG00000029572	-	99	52.660	ENSELUG00000009287	rad54b	99	52.503	Esox_lucius
ENSPPAG00000029572	-	99	85.809	ENSFCAG00000015513	-	99	88.674	Felis_catus
ENSPPAG00000029572	-	99	67.609	ENSFALG00000005467	-	99	67.609	Ficedula_albicollis
ENSPPAG00000029572	-	99	84.268	ENSFDAG00000020541	-	100	84.268	Fukomys_damarensis
ENSPPAG00000029572	-	89	55.502	ENSFHEG00000014382	rad54b	90	55.609	Fundulus_heteroclitus
ENSPPAG00000029572	-	86	54.637	ENSGMOG00000014774	rad54b	98	54.637	Gadus_morhua
ENSPPAG00000029572	-	100	67.283	ENSGALG00000043597	RAD54B	99	67.283	Gallus_gallus
ENSPPAG00000029572	-	99	53.384	ENSGAFG00000007901	rad54b	99	53.384	Gambusia_affinis
ENSPPAG00000029572	-	99	53.548	ENSGACG00000009128	rad54b	99	53.548	Gasterosteus_aculeatus
ENSPPAG00000029572	-	100	69.750	ENSGAGG00000018747	-	99	69.750	Gopherus_agassizii
ENSPPAG00000029572	-	99	97.030	ENSGGOG00000023516	-	99	97.030	Gorilla_gorilla
ENSPPAG00000029572	-	99	52.401	ENSHBUG00000016017	rad54b	99	52.401	Haplochromis_burtoni
ENSPPAG00000029572	-	99	83.060	ENSHGLG00000008263	RAD54B	99	83.060	Heterocephalus_glaber_female
ENSPPAG00000029572	-	99	82.302	ENSHGLG00100008108	-	99	82.302	Heterocephalus_glaber_male
ENSPPAG00000029572	-	99	50.911	ENSHCOG00000004764	rad54b	98	54.007	Hippocampus_comes
ENSPPAG00000029572	-	99	51.468	ENSIPUG00000018531	rad54b	99	51.468	Ictalurus_punctatus
ENSPPAG00000029572	-	99	83.554	ENSSTOG00000010791	-	99	83.646	Ictidomys_tridecemlineatus
ENSPPAG00000029572	-	99	80.858	ENSJJAG00000010314	Rad54b	99	80.858	Jaculus_jaculus
ENSPPAG00000029572	-	99	52.017	ENSKMAG00000004744	rad54b	99	52.017	Kryptolebias_marmoratus
ENSPPAG00000029572	-	81	68.097	ENSLACG00000000859	-	100	68.097	Latimeria_chalumnae
ENSPPAG00000029572	-	99	56.038	ENSLOCG00000010100	rad54b	96	61.172	Lepisosteus_oculatus
ENSPPAG00000029572	-	89	84.158	ENSLAFG00000015315	-	100	84.158	Loxodonta_africana
ENSPPAG00000029572	-	100	95.604	ENSMFAG00000031629	-	100	96.006	Macaca_fascicularis
ENSPPAG00000029572	-	100	95.604	ENSMMUG00000005659	-	100	95.604	Macaca_mulatta
ENSPPAG00000029572	-	100	95.604	ENSMNEG00000016408	-	100	95.604	Macaca_nemestrina
ENSPPAG00000029572	-	100	95.824	ENSMLEG00000006946	-	100	95.824	Mandrillus_leucophaeus
ENSPPAG00000029572	-	99	54.104	ENSMAMG00000012269	rad54b	99	54.104	Mastacembelus_armatus
ENSPPAG00000029572	-	99	52.401	ENSMZEG00005005281	rad54b	95	57.431	Maylandia_zebra
ENSPPAG00000029572	-	100	67.204	ENSMGAG00000012024	-	99	67.204	Meleagris_gallopavo
ENSPPAG00000029572	-	99	77.778	ENSMAUG00000013586	Rad54b	99	77.778	Mesocricetus_auratus
ENSPPAG00000029572	-	99	83.388	ENSMICG00000000754	-	99	83.388	Microcebus_murinus
ENSPPAG00000029572	-	99	76.044	ENSMOCG00000020035	Rad54b	99	76.044	Microtus_ochrogaster
ENSPPAG00000029572	-	99	52.826	ENSMMOG00000003394	rad54b	99	52.826	Mola_mola
ENSPPAG00000029572	-	88	75.592	ENSMODG00000007343	-	99	75.592	Monodelphis_domestica
ENSPPAG00000029572	-	70	57.364	ENSMALG00000001520	rad54b	99	57.364	Monopterus_albus
ENSPPAG00000029572	-	99	77.008	MGP_CAROLIEiJ_G0025810	Rad54b	99	77.008	Mus_caroli
ENSPPAG00000029572	-	99	76.762	ENSMUSG00000078773	Rad54b	99	76.762	Mus_musculus
ENSPPAG00000029572	-	99	77.203	MGP_PahariEiJ_G0023933	Rad54b	99	77.203	Mus_pahari
ENSPPAG00000029572	-	99	77.668	MGP_SPRETEiJ_G0026758	Rad54b	99	77.668	Mus_spretus
ENSPPAG00000029572	-	89	86.403	ENSMPUG00000008878	-	99	86.403	Mustela_putorius_furo
ENSPPAG00000029572	-	100	83.224	ENSMLUG00000008953	-	100	83.224	Myotis_lucifugus
ENSPPAG00000029572	-	99	81.729	ENSNGAG00000017537	Rad54b	99	81.729	Nannospalax_galili
ENSPPAG00000029572	-	99	53.384	ENSNBRG00000013394	rad54b	99	53.384	Neolamprologus_brichardi
ENSPPAG00000029572	-	100	96.813	ENSNLEG00000003062	-	99	96.970	Nomascus_leucogenys
ENSPPAG00000029572	-	82	68.852	ENSMEUG00000012426	-	82	68.852	Notamacropus_eugenii
ENSPPAG00000029572	-	78	84.877	ENSODEG00000002650	-	95	84.877	Octodon_degus
ENSPPAG00000029572	-	99	82.398	ENSODEG00000019564	-	99	82.398	Octodon_degus
ENSPPAG00000029572	-	99	53.556	ENSONIG00000006067	rad54b	99	53.556	Oreochromis_niloticus
ENSPPAG00000029572	-	82	76.165	ENSOANG00000011348	-	99	76.165	Ornithorhynchus_anatinus
ENSPPAG00000029572	-	99	84.286	ENSOCUG00000016478	-	99	84.286	Oryctolagus_cuniculus
ENSPPAG00000029572	-	99	53.291	ENSORLG00000008918	rad54b	99	60.278	Oryzias_latipes
ENSPPAG00000029572	-	70	60.433	ENSORLG00020012171	rad54b	99	60.433	Oryzias_latipes_hni
ENSPPAG00000029572	-	99	53.095	ENSORLG00015018536	rad54b	99	53.095	Oryzias_latipes_hsok
ENSPPAG00000029572	-	84	57.806	ENSOMEG00000004345	rad54b	99	57.806	Oryzias_melastigma
ENSPPAG00000029572	-	99	85.604	ENSOGAG00000007854	-	99	85.604	Otolemur_garnettii
ENSPPAG00000029572	-	89	85.943	ENSOARG00000007691	-	99	85.943	Ovis_aries
ENSPPAG00000029572	-	99	85.919	ENSPPRG00000007571	-	99	88.812	Panthera_pardus
ENSPPAG00000029572	-	79	88.812	ENSPTIG00000012670	-	99	88.812	Panthera_tigris_altaica
ENSPPAG00000029572	-	100	98.022	ENSPTRG00000020427	-	100	98.022	Pan_troglodytes
ENSPPAG00000029572	-	100	95.934	ENSPANG00000019566	-	100	95.934	Papio_anubis
ENSPPAG00000029572	-	99	56.972	ENSPKIG00000014974	rad54b	99	56.972	Paramormyrops_kingsleyae
ENSPPAG00000029572	-	100	68.444	ENSPSIG00000002383	-	98	72.547	Pelodiscus_sinensis
ENSPPAG00000029572	-	99	78.218	ENSPEMG00000012133	Rad54b	99	78.218	Peromyscus_maniculatus_bairdii
ENSPPAG00000029572	-	87	57.428	ENSPMAG00000002916	rad54b	99	57.428	Petromyzon_marinus
ENSPPAG00000029572	-	89	76.449	ENSPCIG00000020151	-	94	76.551	Phascolarctos_cinereus
ENSPPAG00000029572	-	99	53.404	ENSPFOG00000023411	rad54b	99	53.404	Poecilia_formosa
ENSPPAG00000029572	-	99	53.298	ENSPLAG00000010430	rad54b	99	53.298	Poecilia_latipinna
ENSPPAG00000029572	-	99	53.731	ENSPMEG00000016873	rad54b	95	58.220	Poecilia_mexicana
ENSPPAG00000029572	-	99	54.072	ENSPREG00000018443	rad54b	99	54.072	Poecilia_reticulata
ENSPPAG00000029572	-	100	96.703	ENSPPYG00000018750	-	100	96.703	Pongo_abelii
ENSPPAG00000029572	-	99	88.791	ENSPCOG00000026845	-	99	89.655	Propithecus_coquereli
ENSPPAG00000029572	-	87	88.394	ENSPVAG00000000261	-	92	88.394	Pteropus_vampyrus
ENSPPAG00000029572	-	86	57.396	ENSPNYG00000018303	rad54b	96	57.396	Pundamilia_nyererei
ENSPPAG00000029572	-	100	53.162	ENSPNAG00000000295	rad54b	99	53.162	Pygocentrus_nattereri
ENSPPAG00000029572	-	99	74.449	ENSRNOG00000039949	Rad54b	99	74.449	Rattus_norvegicus
ENSPPAG00000029572	-	100	94.835	ENSRBIG00000020419	-	100	94.835	Rhinopithecus_bieti
ENSPPAG00000029572	-	100	94.835	ENSRROG00000039897	-	100	94.835	Rhinopithecus_roxellana
ENSPPAG00000029572	-	81	36.597	YBR073W	RDH54	82	37.073	Saccharomyces_cerevisiae
ENSPPAG00000029572	-	100	93.085	ENSSBOG00000028501	-	100	93.085	Saimiri_boliviensis_boliviensis
ENSPPAG00000029572	-	99	73.765	ENSSHAG00000017038	-	99	73.765	Sarcophilus_harrisii
ENSPPAG00000029572	-	63	63.478	ENSSFOG00015008483	rad54b	89	63.478	Scleropages_formosus
ENSPPAG00000029572	-	99	52.169	ENSSMAG00000018659	rad54b	99	52.793	Scophthalmus_maximus
ENSPPAG00000029572	-	99	52.804	ENSSDUG00000001122	rad54b	98	52.598	Seriola_dumerili
ENSPPAG00000029572	-	99	52.571	ENSSLDG00000013787	rad54b	99	52.731	Seriola_lalandi_dorsalis
ENSPPAG00000029572	-	100	67.287	ENSSPUG00000016497	-	99	67.287	Sphenodon_punctatus
ENSPPAG00000029572	-	99	53.896	ENSSPAG00000012800	rad54b	99	53.896	Stegastes_partitus
ENSPPAG00000029572	-	100	83.736	ENSSSCG00000006101	-	99	86.875	Sus_scrofa
ENSPPAG00000029572	-	99	66.921	ENSTGUG00000011880	-	99	66.921	Taeniopygia_guttata
ENSPPAG00000029572	-	99	51.420	ENSTRUG00000010015	rad54b	99	51.623	Takifugu_rubripes
ENSPPAG00000029572	-	99	81.738	ENSTTRG00000006312	-	99	81.738	Tursiops_truncatus
ENSPPAG00000029572	-	99	86.264	ENSUMAG00000016401	-	99	86.264	Ursus_maritimus
ENSPPAG00000029572	-	99	83.040	ENSVPAG00000003157	-	99	83.040	Vicugna_pacos
ENSPPAG00000029572	-	99	54.258	ENSXETG00000025924	rad54b	99	59.269	Xenopus_tropicalis
ENSPPAG00000029572	-	99	53.384	ENSXMAG00000013141	rad54b	99	53.384	Xiphophorus_maculatus