EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPPAG00000029933 (Gene tree)
Gene ID
100971348
Gene Symbol
PUF60
Alias
-
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Pan_paniscus
Status
putative
Strand
Minus strand
Length
13949 bases
Position
chr8:143583451-143597399
Accession
100971348
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPAP00000013762RRM_1PF00076.222.8e-4312
ENSPPAP00000013762RRM_1PF00076.222.8e-4322
ENSPPAP00000013765RRM_1PF00076.223e-4312
ENSPPAP00000013765RRM_1PF00076.223e-4322
ENSPPAP00000013776RRM_1PF00076.223.1e-4312
ENSPPAP00000013776RRM_1PF00076.223.1e-4322
ENSPPAP00000013761RRM_1PF00076.223.2e-4312
ENSPPAP00000013761RRM_1PF00076.223.2e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPAT00000036439PUF60-2031814XM_008972770ENSPPAP00000013765530 (aa)XP_008971018A0A2R9A919
ENSPPAT00000036451PUF60-2041596-ENSPPAP00000013776531 (aa)-A0A2R9AA58
ENSPPAT00000036436PUF60-2022557XM_003819446ENSPPAP00000013762542 (aa)XP_003819494A0A2R9AEA5
ENSPPAT00000036435PUF60-2012611XM_003819445ENSPPAP00000013761559 (aa)XP_003819493A0A2R9AA46
Gene Model
Click here to download ENSPPAG00000029933's gene model file
Pathways
Pathway IDPathway NameSource
pps03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000029933's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPPAG00000029933PUF605135.294ENSPPAG00000039782U2AF26037.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPAG00000029933PUF60100100.000ENSG00000179950PUF60100100.000Homo_sapiens
ENSPPAG00000029933PUF609984.615ENSAPOG00000001713puf60b9985.417Acanthochromis_polyacanthus
ENSPPAG00000029933PUF609996.953ENSAMEG00000006406PUF609996.953Ailuropoda_melanoleuca
ENSPPAG00000029933PUF609777.159ENSACIG00000003263-9977.586Amphilophus_citrinellus
ENSPPAG00000029933PUF609785.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSPPAG00000029933PUF609984.615ENSAOCG00000005395puf60b10086.180Amphiprion_ocellaris
ENSPPAG00000029933PUF6010080.712ENSAOCG00000015558-10081.273Amphiprion_ocellaris
ENSPPAG00000029933PUF609879.886ENSAPEG00000011923puf60b9982.583Amphiprion_percula
ENSPPAG00000029933PUF609772.553ENSAPEG00000001836-9976.471Amphiprion_percula
ENSPPAG00000029933PUF609984.615ENSATEG00000001730puf60b9985.227Anabas_testudineus
ENSPPAG00000029933PUF609980.414ENSATEG00000006303-9981.333Anabas_testudineus
ENSPPAG00000029933PUF609898.084ENSAPLG00000010150PUF6010098.084Anas_platyrhynchos
ENSPPAG00000029933PUF609996.198ENSACAG00000001645PUF609896.023Anolis_carolinensis
ENSPPAG00000029933PUF6010099.623ENSANAG00000018626PUF6010099.623Aotus_nancymaae
ENSPPAG00000029933PUF609785.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSPPAG00000029933PUF609884.299ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSPPAG00000029933PUF609776.449ENSAMXG00000041030puf60b10076.735Astyanax_mexicanus
ENSPPAG00000029933PUF6010099.245ENSBTAG00000037493PUF6010099.245Bos_taurus
ENSPPAG00000029933PUF608050.162WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSPPAG00000029933PUF6010099.811ENSCJAG00000021485PUF6010099.811Callithrix_jacchus
ENSPPAG00000029933PUF6010099.448ENSCAFG00000001400PUF6010099.448Canis_familiaris
ENSPPAG00000029933PUF6010099.623ENSCAFG00020018754PUF6010099.623Canis_lupus_dingo
ENSPPAG00000029933PUF609999.093ENSCHIG00000001618PUF609299.093Capra_hircus
ENSPPAG00000029933PUF6010099.434ENSTSYG00000011912PUF6010099.612Carlito_syrichta
ENSPPAG00000029933PUF609992.844ENSCPOG00000014613PUF609993.023Cavia_porcellus
ENSPPAG00000029933PUF6010099.623ENSCCAG00000007744PUF6010099.623Cebus_capucinus
ENSPPAG00000029933PUF60100100.000ENSCATG00000035405PUF60100100.000Cercocebus_atys
ENSPPAG00000029933PUF6010098.582ENSCLAG00000009154PUF6010098.582Chinchilla_lanigera
ENSPPAG00000029933PUF6097100.000ENSCSAG00000008878PUF60100100.000Chlorocebus_sabaeus
ENSPPAG00000029933PUF609997.727ENSCPBG00000005595PUF609997.727Chrysemys_picta_bellii
ENSPPAG00000029933PUF606259.882ENSCING00000002156-8763.043Ciona_intestinalis
ENSPPAG00000029933PUF6010048.175ENSCING00000008436-9948.603Ciona_intestinalis
ENSPPAG00000029933PUF609555.364ENSCSAVG00000001385-9955.000Ciona_savignyi
ENSPPAG00000029933PUF609549.109ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSPPAG00000029933PUF6080100.000ENSCANG00000041843PUF60100100.000Colobus_angolensis_palliatus
ENSPPAG00000029933PUF6010097.872ENSCGRG00001017442Puf6010097.872Cricetulus_griseus_chok1gshd
ENSPPAG00000029933PUF609898.659ENSCGRG00000003717Puf609997.302Cricetulus_griseus_crigri
ENSPPAG00000029933PUF609971.269ENSCSEG00000014845-8977.273Cynoglossus_semilaevis
ENSPPAG00000029933PUF609884.630ENSCSEG00000019887puf60b9384.440Cynoglossus_semilaevis
ENSPPAG00000029933PUF608979.789ENSCVAG00000001560-9879.536Cyprinodon_variegatus
ENSPPAG00000029933PUF609784.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSPPAG00000029933PUF609778.759ENSDARG00000001241puf60b9996.032Danio_rerio
ENSPPAG00000029933PUF609787.146ENSDARG00000032175puf60a9994.043Danio_rerio
ENSPPAG00000029933PUF609981.622ENSDNOG00000043278PUF609881.622Dasypus_novemcinctus
ENSPPAG00000029933PUF609999.274ENSDORG00000004585Puf6010099.274Dipodomys_ordii
ENSPPAG00000029933PUF609548.797FBgn0028577hfp9949.644Drosophila_melanogaster
ENSPPAG00000029933PUF609860.672ENSEBUG00000014291puf60b8565.739Eptatretus_burgeri
ENSPPAG00000029933PUF609569.841ENSEBUG00000005470-8872.016Eptatretus_burgeri
ENSPPAG00000029933PUF6010099.623ENSEASG00005009695PUF6010099.623Equus_asinus_asinus
ENSPPAG00000029933PUF609999.277ENSECAG00000024681PUF609999.277Equus_caballus
ENSPPAG00000029933PUF609982.397ENSELUG00000006507puf60b10079.286Esox_lucius
ENSPPAG00000029933PUF6010084.387ENSELUG00000018443-9985.602Esox_lucius
ENSPPAG00000029933PUF6010099.245ENSFCAG00000001045PUF6010099.245Felis_catus
ENSPPAG00000029933PUF609985.496ENSFALG00000001136PUF609986.667Ficedula_albicollis
ENSPPAG00000029933PUF6010098.227ENSFDAG00000017177PUF6010098.227Fukomys_damarensis
ENSPPAG00000029933PUF6010083.364ENSFHEG00000020046puf60b10085.988Fundulus_heteroclitus
ENSPPAG00000029933PUF609379.116ENSFHEG00000021687PUF6010079.959Fundulus_heteroclitus
ENSPPAG00000029933PUF609871.429ENSGMOG00000006392puf60b10070.677Gadus_morhua
ENSPPAG00000029933PUF606597.965ENSGALG00000039901PUF609497.965Gallus_gallus
ENSPPAG00000029933PUF609779.344ENSGAFG00000004334-9978.842Gambusia_affinis
ENSPPAG00000029933PUF6010082.617ENSGAFG00000021040puf60b10085.413Gambusia_affinis
ENSPPAG00000029933PUF609969.450ENSGACG00000001484-10069.231Gasterosteus_aculeatus
ENSPPAG00000029933PUF6010073.184ENSGACG00000004717puf60b10072.523Gasterosteus_aculeatus
ENSPPAG00000029933PUF609997.727ENSGAGG00000013289PUF609397.727Gopherus_agassizii
ENSPPAG00000029933PUF60100100.000ENSGGOG00000004646PUF60100100.000Gorilla_gorilla
ENSPPAG00000029933PUF609981.051ENSHBUG00000009634-10082.540Haplochromis_burtoni
ENSPPAG00000029933PUF609884.630ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSPPAG00000029933PUF6010098.227ENSHGLG00000006111PUF6010098.227Heterocephalus_glaber_female
ENSPPAG00000029933PUF6010098.227ENSHGLG00100012362PUF6010098.227Heterocephalus_glaber_male
ENSPPAG00000029933PUF609666.601ENSHCOG00000000378-9964.850Hippocampus_comes
ENSPPAG00000029933PUF609881.952ENSHCOG00000015541puf60b10081.550Hippocampus_comes
ENSPPAG00000029933PUF609778.571ENSIPUG00000004660puf60b9978.343Ictalurus_punctatus
ENSPPAG00000029933PUF609782.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSPPAG00000029933PUF6010099.284ENSSTOG00000025037PUF6010099.284Ictidomys_tridecemlineatus
ENSPPAG00000029933PUF6010098.577ENSJJAG00000001076Puf6010098.577Jaculus_jaculus
ENSPPAG00000029933PUF609778.261ENSKMAG00000010106-10075.746Kryptolebias_marmoratus
ENSPPAG00000029933PUF609784.837ENSKMAG00000016745puf60b10085.988Kryptolebias_marmoratus
ENSPPAG00000029933PUF609983.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSPPAG00000029933PUF606891.185ENSLACG00000005456PUF6010090.710Latimeria_chalumnae
ENSPPAG00000029933PUF6010089.681ENSLOCG00000010106puf60b10088.555Lepisosteus_oculatus
ENSPPAG00000029933PUF609897.893ENSLAFG00000022929PUF6010096.057Loxodonta_africana
ENSPPAG00000029933PUF60100100.000ENSMFAG00000043373PUF60100100.000Macaca_fascicularis
ENSPPAG00000029933PUF60100100.000ENSMMUG00000013558PUF60100100.000Macaca_mulatta
ENSPPAG00000029933PUF60100100.000ENSMNEG00000031099PUF60100100.000Macaca_nemestrina
ENSPPAG00000029933PUF6097100.000ENSMLEG00000040009PUF60100100.000Mandrillus_leucophaeus
ENSPPAG00000029933PUF609981.989ENSMAMG00000019476-9981.973Mastacembelus_armatus
ENSPPAG00000029933PUF609984.270ENSMAMG00000010394puf60b10083.551Mastacembelus_armatus
ENSPPAG00000029933PUF609981.238ENSMZEG00005019425-9981.784Maylandia_zebra
ENSPPAG00000029933PUF609785.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSPPAG00000029933PUF609997.714ENSMGAG00000013070PUF609997.714Meleagris_gallopavo
ENSPPAG00000029933PUF6010076.822ENSMAUG00000018549-10076.822Mesocricetus_auratus
ENSPPAG00000029933PUF607297.549ENSMAUG00000014267-10097.549Mesocricetus_auratus
ENSPPAG00000029933PUF6010099.623ENSMICG00000012226PUF6010099.623Microcebus_murinus
ENSPPAG00000029933PUF6010098.050ENSMOCG00000018780Puf6010098.050Microtus_ochrogaster
ENSPPAG00000029933PUF609872.658ENSMMOG00000018059-9976.484Mola_mola
ENSPPAG00000029933PUF609785.605ENSMMOG00000004217puf60b10085.605Mola_mola
ENSPPAG00000029933PUF6010097.601ENSMODG00000009161PUF6010097.601Monodelphis_domestica
ENSPPAG00000029933PUF609877.609ENSMALG00000006797puf60b9977.652Monopterus_albus
ENSPPAG00000029933PUF609979.887ENSMALG00000000200-9979.057Monopterus_albus
ENSPPAG00000029933PUF6010097.872MGP_CAROLIEiJ_G0019910Puf6010097.872Mus_caroli
ENSPPAG00000029933PUF6010097.872ENSMUSG00000002524Puf6010097.872Mus_musculus
ENSPPAG00000029933PUF6010097.872MGP_PahariEiJ_G0019920Puf6010097.872Mus_pahari
ENSPPAG00000029933PUF6010097.872MGP_SPRETEiJ_G0020812Puf6010097.872Mus_spretus
ENSPPAG00000029933PUF609998.911ENSMPUG00000008137PUF609798.911Mustela_putorius_furo
ENSPPAG00000029933PUF6010091.509ENSMLUG00000013032-9895.050Myotis_lucifugus
ENSPPAG00000029933PUF609998.367ENSMLUG00000000238-9898.367Myotis_lucifugus
ENSPPAG00000029933PUF6010098.227ENSNGAG00000000712Puf6010099.031Nannospalax_galili
ENSPPAG00000029933PUF609981.426ENSNBRG00000017223-9981.939Neolamprologus_brichardi
ENSPPAG00000029933PUF608281.236ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSPPAG00000029933PUF60100100.000ENSNLEG00000002156PUF60100100.000Nomascus_leucogenys
ENSPPAG00000029933PUF607399.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSPPAG00000029933PUF6074100.000ENSODEG00000014024-100100.000Octodon_degus
ENSPPAG00000029933PUF609573.964ENSODEG00000015513-9971.186Octodon_degus
ENSPPAG00000029933PUF609984.181ENSONIG00000006247puf60b9984.659Oreochromis_niloticus
ENSPPAG00000029933PUF609981.579ENSONIG00000014030-9982.008Oreochromis_niloticus
ENSPPAG00000029933PUF609678.278ENSOANG00000006962PUF609978.405Ornithorhynchus_anatinus
ENSPPAG00000029933PUF609778.598ENSORLG00000028655-9978.707Oryzias_latipes
ENSPPAG00000029933PUF609983.865ENSORLG00000012279puf60b10084.837Oryzias_latipes
ENSPPAG00000029933PUF609983.865ENSORLG00020007333puf6010084.837Oryzias_latipes_hni
ENSPPAG00000029933PUF609977.985ENSORLG00020018144-9978.090Oryzias_latipes_hni
ENSPPAG00000029933PUF609982.991ENSORLG00015007718puf60b10084.704Oryzias_latipes_hsok
ENSPPAG00000029933PUF609978.067ENSORLG00015016833-9978.172Oryzias_latipes_hsok
ENSPPAG00000029933PUF609978.987ENSOMEG00000022185-9978.987Oryzias_melastigma
ENSPPAG00000029933PUF609981.618ENSOMEG00000001643puf60b9983.030Oryzias_melastigma
ENSPPAG00000029933PUF609899.425ENSOGAG00000006259PUF609998.387Otolemur_garnettii
ENSPPAG00000029933PUF609896.743ENSOARG00000016235PUF609996.750Ovis_aries
ENSPPAG00000029933PUF6010099.245ENSPPRG00000003257PUF6010099.245Panthera_pardus
ENSPPAG00000029933PUF609998.692ENSPTIG00000009795PUF609996.935Panthera_tigris_altaica
ENSPPAG00000029933PUF609999.819ENSPTRG00000043963-9999.819Pan_troglodytes
ENSPPAG00000029933PUF6010099.821ENSPTRG00000020670PUF6010099.821Pan_troglodytes
ENSPPAG00000029933PUF60100100.000ENSPANG00000021936PUF60100100.000Papio_anubis
ENSPPAG00000029933PUF6010085.102ENSPKIG00000004295puf60a9992.059Paramormyrops_kingsleyae
ENSPPAG00000029933PUF6010086.517ENSPKIG00000012204puf60b10087.885Paramormyrops_kingsleyae
ENSPPAG00000029933PUF609897.893ENSPSIG00000004679PUF609997.897Pelodiscus_sinensis
ENSPPAG00000029933PUF609784.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSPPAG00000029933PUF6010098.050ENSPEMG00000008820Puf6010098.050Peromyscus_maniculatus_bairdii
ENSPPAG00000029933PUF609999.044ENSPCIG00000020270PUF609999.232Phascolarctos_cinereus
ENSPPAG00000029933PUF609979.473ENSPFOG00000011118-9979.811Poecilia_formosa
ENSPPAG00000029933PUF6010083.364ENSPFOG00000019217puf60b10084.630Poecilia_formosa
ENSPPAG00000029933PUF609979.473ENSPLAG00000017025-9279.434Poecilia_latipinna
ENSPPAG00000029933PUF609784.837ENSPLAG00000010754puf60b10085.988Poecilia_latipinna
ENSPPAG00000029933PUF6010083.364ENSPMEG00000000838puf60b10085.988Poecilia_mexicana
ENSPPAG00000029933PUF609979.473ENSPMEG00000009767-9279.811Poecilia_mexicana
ENSPPAG00000029933PUF6010080.692ENSPREG00000005440puf60b10083.730Poecilia_reticulata
ENSPPAG00000029933PUF607998.321ENSPPYG00000018951-9598.321Pongo_abelii
ENSPPAG00000029933PUF607999.281ENSPCAG00000014837PUF6010099.281Procavia_capensis
ENSPPAG00000029933PUF6010099.434ENSPCOG00000027981PUF6010099.434Propithecus_coquereli
ENSPPAG00000029933PUF6097100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSPPAG00000029933PUF609785.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSPPAG00000029933PUF609981.238ENSPNYG00000004273-9981.784Pundamilia_nyererei
ENSPPAG00000029933PUF609976.836ENSPNAG00000019415puf60b9178.794Pygocentrus_nattereri
ENSPPAG00000029933PUF609982.075ENSPNAG00000019909puf60a9984.766Pygocentrus_nattereri
ENSPPAG00000029933PUF6010097.806ENSRNOG00000009960Puf6010097.806Rattus_norvegicus
ENSPPAG00000029933PUF60100100.000ENSRBIG00000035274PUF60100100.000Rhinopithecus_bieti
ENSPPAG00000029933PUF60100100.000ENSRROG00000029360PUF60100100.000Rhinopithecus_roxellana
ENSPPAG00000029933PUF609998.282ENSSBOG00000027089PUF609997.921Saimiri_boliviensis_boliviensis
ENSPPAG00000029933PUF609196.844ENSSHAG00000006668PUF609696.844Sarcophilus_harrisii
ENSPPAG00000029933PUF609386.235ENSSFOG00015019619puf60b9986.235Scleropages_formosus
ENSPPAG00000029933PUF6010080.536ENSSFOG00015019371puf60a9886.922Scleropages_formosus
ENSPPAG00000029933PUF607391.638ENSSMAG00000016381puf60b7491.638Scophthalmus_maximus
ENSPPAG00000029933PUF609979.434ENSSDUG00000007048-9979.811Seriola_dumerili
ENSPPAG00000029933PUF609983.302ENSSDUG00000009935puf60b10083.302Seriola_dumerili
ENSPPAG00000029933PUF609885.361ENSSLDG00000024011puf60b10083.738Seriola_lalandi_dorsalis
ENSPPAG00000029933PUF609780.228ENSSLDG00000007366-9980.645Seriola_lalandi_dorsalis
ENSPPAG00000029933PUF606486.136ENSSPUG00000013518PUF609485.460Sphenodon_punctatus
ENSPPAG00000029933PUF609781.870ENSSPAG00000020285-10082.443Stegastes_partitus
ENSPPAG00000029933PUF609981.901ENSSPAG00000012144puf60b10083.925Stegastes_partitus
ENSPPAG00000029933PUF609998.025ENSSSCG00000038800PUF609898.812Sus_scrofa
ENSPPAG00000029933PUF609894.828ENSTGUG00000012797-10094.828Taeniopygia_guttata
ENSPPAG00000029933PUF609777.519ENSTRUG00000008843-10080.160Takifugu_rubripes
ENSPPAG00000029933PUF609884.061ENSTRUG00000005420puf60b10082.617Takifugu_rubripes
ENSPPAG00000029933PUF609877.778ENSTNIG00000003069-10077.820Tetraodon_nigroviridis
ENSPPAG00000029933PUF609884.061ENSTNIG00000013675puf60b10083.902Tetraodon_nigroviridis
ENSPPAG00000029933PUF607981.214ENSTBEG00000001899-10081.503Tupaia_belangeri
ENSPPAG00000029933PUF606095.608ENSTBEG00000002751-9995.593Tupaia_belangeri
ENSPPAG00000029933PUF609798.643ENSTTRG00000017088PUF6010098.643Tursiops_truncatus
ENSPPAG00000029933PUF6010099.623ENSUAMG00000024917PUF6010099.623Ursus_americanus
ENSPPAG00000029933PUF609894.828ENSUMAG00000000272PUF609994.192Ursus_maritimus
ENSPPAG00000029933PUF609999.457ENSVVUG00000022527PUF6010099.612Vulpes_vulpes
ENSPPAG00000029933PUF609894.242ENSXETG00000012469puf609994.246Xenopus_tropicalis
ENSPPAG00000029933PUF609781.574ENSXCOG00000012355puf60b10085.516Xiphophorus_couchianus
ENSPPAG00000029933PUF6010083.364ENSXMAG00000001862puf60b10085.988Xiphophorus_maculatus
ENSPPAG00000029933PUF609977.419ENSXMAG00000010507-9979.528Xiphophorus_maculatus

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