EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000030253 (Gene tree)
Gene ID: 100985536
Gene Symbol: RAB1A
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 43482 bases
Position: chr2A:66274809-66318290
Accession: 100985536
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000014240	MMR_HSR1	PF01926.23	2.1e-05	1	1
ENSPPAP00000014221	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000036925	RAB1A-203	498	-	ENSPPAP00000014245	165 (aa)	-	A0A2R9AAG0
ENSPPAT00000036926	RAB1A-204	462	-	ENSPPAP00000014246	153 (aa)	-	A0A2R9ABH6
ENSPPAT00000036932	RAB1A-206	366	-	ENSPPAP00000014252	121 (aa)	-	A0A2R9AFY8
ENSPPAT00000036920	RAB1A-202	609	-	ENSPPAP00000014240	202 (aa)	-	A0A2R9AAF4
ENSPPAT00000036930	RAB1A-205	402	-	ENSPPAP00000014250	133 (aa)	-	A0A2R9AAG5
ENSPPAT00000036901	RAB1A-201	2752	XM_003830905	ENSPPAP00000014221	202 (aa)	XP_003830953	A0A2R9ABF0

Gene Model

Click here to download ENSPPAG00000030253's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000030253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000030253	RAB1A	99	46.411	ENSPPAG00000028589	-	96	46.411
ENSPPAG00000030253	RAB1A	85	35.028	ENSPPAG00000028620	HRAS	93	35.028
ENSPPAG00000030253	RAB1A	85	35.632	ENSPPAG00000036377	MRAS	83	35.632
ENSPPAG00000030253	RAB1A	96	39.086	ENSPPAG00000030833	RAB22A	97	39.086
ENSPPAG00000030253	RAB1A	77	39.623	ENSPPAG00000002892	RAB9B	79	39.623
ENSPPAG00000030253	RAB1A	78	39.752	ENSPPAG00000037180	RAB34	62	39.752
ENSPPAG00000030253	RAB1A	58	34.746	ENSPPAG00000031562	ARL8A	61	34.746
ENSPPAG00000030253	RAB1A	81	47.619	ENSPPAG00000038245	RAB33A	71	47.619
ENSPPAG00000030253	RAB1A	84	44.253	ENSPPAG00000043376	RAB33B	76	44.253
ENSPPAG00000030253	RAB1A	81	38.415	ENSPPAG00000037915	NRAS	91	38.650
ENSPPAG00000030253	RAB1A	96	38.384	ENSPPAG00000011436	RAB6A	94	38.384
ENSPPAG00000030253	RAB1A	58	31.933	ENSPPAG00000022226	ARL4A	59	31.933
ENSPPAG00000030253	RAB1A	96	36.410	ENSPPAG00000042439	RAB6B	94	36.410
ENSPPAG00000030253	RAB1A	58	32.203	ENSPPAG00000043156	ARL8B	61	32.203
ENSPPAG00000030253	RAB1A	86	33.526	ENSPPAG00000010023	RAB23	73	33.526
ENSPPAG00000030253	RAB1A	82	50.602	ENSPPAG00000031604	RAB30	82	50.602
ENSPPAG00000030253	RAB1A	75	32.450	ENSPPAG00000033987	-	81	32.450
ENSPPAG00000030253	RAB1A	90	46.703	ENSPPAG00000041625	RAB18	93	45.876
ENSPPAG00000030253	RAB1A	98	40.284	ENSPPAG00000031759	RAB14	97	40.284
ENSPPAG00000030253	RAB1A	87	43.820	ENSPPAG00000041186	RAB39B	84	43.820
ENSPPAG00000030253	RAB1A	77	39.623	ENSPPAG00000024656	RAB9A	79	39.623
ENSPPAG00000030253	RAB1A	58	33.058	ENSPPAG00000041696	ARL2	61	33.058
ENSPPAG00000030253	RAB1A	79	30.303	ENSPPAG00000031678	DNAJC27	89	30.380
ENSPPAG00000030253	RAB1A	84	52.663	ENSPPAG00000030195	-	78	53.571
ENSPPAG00000030253	RAB1A	53	57.944	ENSPPAG00000037423	-	90	57.944
ENSPPAG00000030253	RAB1A	98	51.269	ENSPPAG00000028435	-	97	51.269
ENSPPAG00000030253	RAB1A	81	37.805	ENSPPAG00000038418	KRAS	95	35.912
ENSPPAG00000030253	RAB1A	96	43.590	ENSPPAG00000037206	RAB5C	89	43.590
ENSPPAG00000030253	RAB1A	58	31.092	ENSPPAG00000002191	ARL4C	61	31.092
ENSPPAG00000030253	RAB1A	83	32.544	ENSPPAG00000031857	-	91	32.544
ENSPPAG00000030253	RAB1A	96	43.367	ENSPPAG00000035431	RAB5B	90	43.367
ENSPPAG00000030253	RAB1A	100	93.069	ENSPPAG00000041445	RAB1B	100	93.069
ENSPPAG00000030253	RAB1A	96	43.878	ENSPPAG00000041763	RAB5A	90	43.878
ENSPPAG00000030253	RAB1A	82	46.386	ENSPPAG00000031127	RAB25	78	46.386
ENSPPAG00000030253	RAB1A	92	48.649	ENSPPAG00000035840	RAB2B	86	48.649
ENSPPAG00000030253	RAB1A	89	32.973	ENSPPAG00000004422	RERG	90	32.973
ENSPPAG00000030253	RAB1A	85	50.000	ENSPPAG00000009152	RAB12	91	46.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000030253	RAB1A	100	100.000	ENSG00000138069	RAB1A	99	100.000	Homo_sapiens
ENSPPAG00000030253	RAB1A	100	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSPPAG00000030253	RAB1A	100	100.000	ENSAMEG00000001127	RAB1A	99	100.000	Ailuropoda_melanoleuca
ENSPPAG00000030253	RAB1A	100	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSPPAG00000030253	RAB1A	100	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSPPAG00000030253	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	99	100.000	Aotus_nancymaae
ENSPPAG00000030253	RAB1A	100	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSPPAG00000030253	RAB1A	100	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSPPAG00000030253	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	99	100.000	Bos_taurus
ENSPPAG00000030253	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	99	100.000	Callithrix_jacchus
ENSPPAG00000030253	RAB1A	100	100.000	ENSCAFG00000003187	RAB1A	99	100.000	Canis_familiaris
ENSPPAG00000030253	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	99	100.000	Canis_lupus_dingo
ENSPPAG00000030253	RAB1A	98	100.000	ENSCHIG00000014060	RAB1A	98	99.000	Capra_hircus
ENSPPAG00000030253	RAB1A	100	98.515	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSPPAG00000030253	RAB1A	100	100.000	ENSCPOG00000015437	RAB1A	99	100.000	Cavia_porcellus
ENSPPAG00000030253	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	100	99.020	Cebus_capucinus
ENSPPAG00000030253	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	99	100.000	Cercocebus_atys
ENSPPAG00000030253	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	99	100.000	Chinchilla_lanigera
ENSPPAG00000030253	RAB1A	100	99.505	ENSCPBG00000013243	RAB1A	99	99.505	Chrysemys_picta_bellii
ENSPPAG00000030253	RAB1A	100	97.525	ENSCANG00000035916	RAB1A	100	97.525	Colobus_angolensis_palliatus
ENSPPAG00000030253	RAB1A	100	100.000	ENSCGRG00001012691	-	99	100.000	Cricetulus_griseus_chok1gshd
ENSPPAG00000030253	RAB1A	100	100.000	ENSCGRG00000008456	-	99	100.000	Cricetulus_griseus_crigri
ENSPPAG00000030253	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	99	100.000	Dasypus_novemcinctus
ENSPPAG00000030253	RAB1A	100	100.000	ENSDORG00000028628	-	99	100.000	Dipodomys_ordii
ENSPPAG00000030253	RAB1A	100	84.236	FBgn0285937	Rab1	99	84.236	Drosophila_melanogaster
ENSPPAG00000030253	RAB1A	100	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSPPAG00000030253	RAB1A	100	100.000	ENSEASG00005007298	RAB1A	99	100.000	Equus_asinus_asinus
ENSPPAG00000030253	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	99	100.000	Equus_caballus
ENSPPAG00000030253	RAB1A	100	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSPPAG00000030253	RAB1A	100	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSPPAG00000030253	RAB1A	100	100.000	ENSFCAG00000002536	RAB1A	99	100.000	Felis_catus
ENSPPAG00000030253	RAB1A	100	97.525	ENSFALG00000013624	RAB1A	99	97.525	Ficedula_albicollis
ENSPPAG00000030253	RAB1A	100	100.000	ENSFDAG00000019505	-	99	100.000	Fukomys_damarensis
ENSPPAG00000030253	RAB1A	100	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSPPAG00000030253	RAB1A	100	99.505	ENSGALG00000031582	RAB1A	99	99.505	Gallus_gallus
ENSPPAG00000030253	RAB1A	100	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSPPAG00000030253	RAB1A	100	99.505	ENSGAGG00000006802	RAB1A	99	99.505	Gopherus_agassizii
ENSPPAG00000030253	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSPPAG00000030253	RAB1A	100	100.000	ENSHGLG00000013585	RAB1A	99	100.000	Heterocephalus_glaber_female
ENSPPAG00000030253	RAB1A	100	98.515	ENSHGLG00100007994	RAB1A	100	98.039	Heterocephalus_glaber_male
ENSPPAG00000030253	RAB1A	100	100.000	ENSSTOG00000020693	-	99	100.000	Ictidomys_tridecemlineatus
ENSPPAG00000030253	RAB1A	98	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSPPAG00000030253	RAB1A	98	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSPPAG00000030253	RAB1A	100	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSPPAG00000030253	RAB1A	100	99.010	ENSLACG00000012869	RAB1A	99	99.010	Latimeria_chalumnae
ENSPPAG00000030253	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	99	100.000	Loxodonta_africana
ENSPPAG00000030253	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	99	100.000	Macaca_fascicularis
ENSPPAG00000030253	RAB1A	98	100.000	ENSMMUG00000021721	RAB1A	92	99.495	Macaca_mulatta
ENSPPAG00000030253	RAB1A	95	99.476	ENSMNEG00000028414	-	96	99.476	Macaca_nemestrina
ENSPPAG00000030253	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	99	100.000	Mandrillus_leucophaeus
ENSPPAG00000030253	RAB1A	100	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSPPAG00000030253	RAB1A	98	99.492	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSPPAG00000030253	RAB1A	100	99.505	ENSMAUG00000012156	Rab1a	99	99.505	Mesocricetus_auratus
ENSPPAG00000030253	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	99	100.000	Microcebus_murinus
ENSPPAG00000030253	RAB1A	100	99.505	ENSMOCG00000017022	Rab1a	99	99.505	Microtus_ochrogaster
ENSPPAG00000030253	RAB1A	100	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSPPAG00000030253	RAB1A	100	99.505	ENSMODG00000003340	RAB1A	99	99.505	Monodelphis_domestica
ENSPPAG00000030253	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	99	100.000	Mus_caroli
ENSPPAG00000030253	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSPPAG00000030253	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	99	100.000	Mus_pahari
ENSPPAG00000030253	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSPPAG00000030253	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	80	100.000	Mustela_putorius_furo
ENSPPAG00000030253	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	99	100.000	Myotis_lucifugus
ENSPPAG00000030253	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	99	100.000	Nannospalax_galili
ENSPPAG00000030253	RAB1A	100	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSPPAG00000030253	RAB1A	98	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSPPAG00000030253	RAB1A	95	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSPPAG00000030253	RAB1A	100	94.059	ENSONIG00000006819	-	99	94.059	Oreochromis_niloticus
ENSPPAG00000030253	RAB1A	100	99.505	ENSOANG00000012438	RAB1A	99	99.505	Ornithorhynchus_anatinus
ENSPPAG00000030253	RAB1A	100	100.000	ENSOCUG00000017003	RAB1A	99	100.000	Oryctolagus_cuniculus
ENSPPAG00000030253	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	99	100.000	Otolemur_garnettii
ENSPPAG00000030253	RAB1A	98	100.000	ENSOARG00000019997	RAB1A	98	99.495	Ovis_aries
ENSPPAG00000030253	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	99	100.000	Panthera_pardus
ENSPPAG00000030253	RAB1A	98	100.000	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSPPAG00000030253	RAB1A	100	100.000	ENSPTRG00000011989	RAB1A	100	100.000	Pan_troglodytes
ENSPPAG00000030253	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	99	100.000	Papio_anubis
ENSPPAG00000030253	RAB1A	100	97.030	ENSPSIG00000008028	RAB1A	99	97.030	Pelodiscus_sinensis
ENSPPAG00000030253	RAB1A	100	96.040	ENSPMGG00000021015	-	99	96.040	Periophthalmus_magnuspinnatus
ENSPPAG00000030253	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	99	100.000	Peromyscus_maniculatus_bairdii
ENSPPAG00000030253	RAB1A	100	99.505	ENSPCIG00000023212	RAB1A	99	99.505	Phascolarctos_cinereus
ENSPPAG00000030253	RAB1A	100	94.059	ENSPFOG00000000498	-	98	94.059	Poecilia_formosa
ENSPPAG00000030253	RAB1A	100	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSPPAG00000030253	RAB1A	100	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSPPAG00000030253	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	99	100.000	Pongo_abelii
ENSPPAG00000030253	RAB1A	100	100.000	ENSPCOG00000017244	RAB1A	99	100.000	Propithecus_coquereli
ENSPPAG00000030253	RAB1A	100	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSPPAG00000030253	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	99	100.000	Rattus_norvegicus
ENSPPAG00000030253	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	99	100.000	Saimiri_boliviensis_boliviensis
ENSPPAG00000030253	RAB1A	99	98.500	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSPPAG00000030253	RAB1A	100	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSPPAG00000030253	RAB1A	100	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSPPAG00000030253	RAB1A	100	99.505	ENSSPUG00000012822	RAB1A	99	99.505	Sphenodon_punctatus
ENSPPAG00000030253	RAB1A	100	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSPPAG00000030253	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSPPAG00000030253	RAB1A	100	97.525	ENSTGUG00000002328	RAB1A	99	97.525	Taeniopygia_guttata
ENSPPAG00000030253	RAB1A	100	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSPPAG00000030253	RAB1A	99	99.497	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSPPAG00000030253	RAB1A	98	100.000	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSPPAG00000030253	RAB1A	100	100.000	ENSVVUG00000027588	RAB1A	99	100.000	Vulpes_vulpes
ENSPPAG00000030253	RAB1A	100	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus