EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000030439 (Gene tree)
Gene ID: 100986595
Gene Symbol: LARP1B
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 145748 bases
Position: chr4:131533028-131678775
Accession: 100986595
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000014572	La	PF05383.17	4.5e-22	1	1
ENSPPAP00000014582	La	PF05383.17	5.2e-22	1	1
ENSPPAP00000014579	La	PF05383.17	1e-21	1	1
ENSPPAP00000014568	La	PF05383.17	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000037269	LARP1B-204	1074	-	ENSPPAP00000014582	357 (aa)	-	A0A2R9AH29
ENSPPAT00000037255	LARP1B-201	4473	XM_003823108	ENSPPAP00000014568	914 (aa)	XP_003823156	A0A2R9AGA0
ENSPPAT00000037259	LARP1B-202	2650	XM_008976709	ENSPPAP00000014572	335 (aa)	XP_008974957	A0A2R9AH18
ENSPPAT00000037266	LARP1B-203	1557	-	ENSPPAP00000014579	518 (aa)	-	A0A2R9ABD9

Gene Model

Click here to download ENSPPAG00000030439's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000030439's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000030439	LARP1B	96	59.670	ENSPPAG00000042993	LARP1	87	59.539

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000030439	LARP1B	100	99.701	ENSG00000138709	LARP1B	100	99.701	Homo_sapiens
ENSPPAG00000030439	LARP1B	97	56.850	ENSAPOG00000020101	larp1b	83	56.923	Acanthochromis_polyacanthus
ENSPPAG00000030439	LARP1B	100	91.343	ENSAMEG00000002748	LARP1B	100	91.343	Ailuropoda_melanoleuca
ENSPPAG00000030439	LARP1B	96	55.055	ENSACIG00000023890	larp1b	82	54.457	Amphilophus_citrinellus
ENSPPAG00000030439	LARP1B	97	48.106	ENSAOCG00000014268	larp1b	84	54.436	Amphiprion_ocellaris
ENSPPAG00000030439	LARP1B	98	57.484	ENSAPEG00000004126	larp1b	84	56.503	Amphiprion_percula
ENSPPAG00000030439	LARP1B	99	56.064	ENSATEG00000017849	larp1b	84	56.183	Anabas_testudineus
ENSPPAG00000030439	LARP1B	96	68.392	ENSAPLG00000010129	LARP1B	98	68.357	Anas_platyrhynchos
ENSPPAG00000030439	LARP1B	98	74.125	ENSACAG00000011338	LARP1B	86	77.230	Anolis_carolinensis
ENSPPAG00000030439	LARP1B	99	86.940	ENSANAG00000034618	LARP1B	100	77.871	Aotus_nancymaae
ENSPPAG00000030439	LARP1B	96	56.304	ENSACLG00000011948	larp1b	82	56.713	Astatotilapia_calliptera
ENSPPAG00000030439	LARP1B	84	56.127	ENSAMXG00000006805	larp1b	81	52.508	Astyanax_mexicanus
ENSPPAG00000030439	LARP1B	100	89.192	ENSBTAG00000012135	LARP1B	99	87.500	Bos_taurus
ENSPPAG00000030439	LARP1B	100	95.560	ENSCJAG00000003338	LARP1B	100	95.560	Callithrix_jacchus
ENSPPAG00000030439	LARP1B	100	90.949	ENSCAFG00000003831	LARP1B	100	90.949	Canis_familiaris
ENSPPAG00000030439	LARP1B	100	91.940	ENSCAFG00020018899	LARP1B	100	91.940	Canis_lupus_dingo
ENSPPAG00000030439	LARP1B	100	88.988	ENSCHIG00000023144	LARP1B	100	88.988	Capra_hircus
ENSPPAG00000030439	LARP1B	98	84.802	ENSTSYG00000002037	-	100	81.461	Carlito_syrichta
ENSPPAG00000030439	LARP1B	76	91.071	ENSCPOG00000034668	-	93	91.071	Cavia_porcellus
ENSPPAG00000030439	LARP1B	100	96.332	ENSCCAG00000021948	LARP1B	100	96.332	Cebus_capucinus
ENSPPAG00000030439	LARP1B	100	96.389	ENSCATG00000013541	LARP1B	100	96.389	Cercocebus_atys
ENSPPAG00000030439	LARP1B	100	86.567	ENSCLAG00000006448	-	100	86.567	Chinchilla_lanigera
ENSPPAG00000030439	LARP1B	100	97.052	ENSCSAG00000003582	LARP1B	100	97.052	Chlorocebus_sabaeus
ENSPPAG00000030439	LARP1B	100	81.332	ENSCHOG00000005354	LARP1B	99	81.223	Choloepus_hoffmanni
ENSPPAG00000030439	LARP1B	99	76.393	ENSCPBG00000017480	LARP1B	86	76.612	Chrysemys_picta_bellii
ENSPPAG00000030439	LARP1B	100	91.739	ENSCANG00000026958	LARP1B	100	91.739	Colobus_angolensis_palliatus
ENSPPAG00000030439	LARP1B	100	89.254	ENSCGRG00001004660	-	100	89.254	Cricetulus_griseus_chok1gshd
ENSPPAG00000030439	LARP1B	100	88.955	ENSCGRG00000001914	-	100	88.955	Cricetulus_griseus_crigri
ENSPPAG00000030439	LARP1B	96	54.565	ENSCSEG00000013519	larp1b	85	53.734	Cynoglossus_semilaevis
ENSPPAG00000030439	LARP1B	97	55.484	ENSCVAG00000005046	larp1b	84	55.111	Cyprinodon_variegatus
ENSPPAG00000030439	LARP1B	97	53.564	ENSDARG00000061169	larp1b	78	54.252	Danio_rerio
ENSPPAG00000030439	LARP1B	98	89.666	ENSDNOG00000018765	-	100	87.280	Dasypus_novemcinctus
ENSPPAG00000030439	LARP1B	89	83.193	ENSETEG00000012497	LARP1B	89	83.193	Echinops_telfairi
ENSPPAG00000030439	LARP1B	94	51.676	ENSEBUG00000003668	larp1b	87	51.404	Eptatretus_burgeri
ENSPPAG00000030439	LARP1B	99	92.515	ENSEASG00005018106	LARP1B	99	92.515	Equus_asinus_asinus
ENSPPAG00000030439	LARP1B	98	92.401	ENSECAG00000001088	LARP1B	81	88.743	Equus_caballus
ENSPPAG00000030439	LARP1B	70	52.648	ENSELUG00000023774	larp1b	72	52.799	Esox_lucius
ENSPPAG00000030439	LARP1B	100	91.343	ENSFCAG00000014650	-	100	91.343	Felis_catus
ENSPPAG00000030439	LARP1B	100	68.152	ENSFALG00000008098	LARP1B	99	69.348	Ficedula_albicollis
ENSPPAG00000030439	LARP1B	97	56.022	ENSFHEG00000010264	larp1b	79	56.189	Fundulus_heteroclitus
ENSPPAG00000030439	LARP1B	75	66.418	ENSGMOG00000005207	larp1b	62	68.027	Gadus_morhua
ENSPPAG00000030439	LARP1B	98	69.605	ENSGALG00000010207	LARP1B	87	69.121	Gallus_gallus
ENSPPAG00000030439	LARP1B	91	58.333	ENSGAFG00000012012	larp1b	93	58.324	Gambusia_affinis
ENSPPAG00000030439	LARP1B	97	52.299	ENSGACG00000004609	larp1b	83	54.439	Gasterosteus_aculeatus
ENSPPAG00000030439	LARP1B	99	76.227	ENSGAGG00000017209	LARP1B	85	76.445	Gopherus_agassizii
ENSPPAG00000030439	LARP1B	100	99.104	ENSGGOG00000015900	LARP1B	100	99.104	Gorilla_gorilla
ENSPPAG00000030439	LARP1B	96	56.427	ENSHBUG00000009730	larp1b	82	56.835	Haplochromis_burtoni
ENSPPAG00000030439	LARP1B	97	74.540	ENSHGLG00000013922	-	96	73.700	Heterocephalus_glaber_female
ENSPPAG00000030439	LARP1B	100	85.251	ENSHGLG00000006728	-	99	85.546	Heterocephalus_glaber_female
ENSPPAG00000030439	LARP1B	100	85.970	ENSHGLG00100014041	-	99	85.886	Heterocephalus_glaber_male
ENSPPAG00000030439	LARP1B	97	74.540	ENSHGLG00100016491	-	96	73.700	Heterocephalus_glaber_male
ENSPPAG00000030439	LARP1B	76	59.773	ENSHCOG00000000918	larp1b	96	60.340	Hippocampus_comes
ENSPPAG00000030439	LARP1B	86	59.080	ENSIPUG00000012138	larp1b	80	54.797	Ictalurus_punctatus
ENSPPAG00000030439	LARP1B	100	88.690	ENSSTOG00000008596	-	100	88.690	Ictidomys_tridecemlineatus
ENSPPAG00000030439	LARP1B	91	66.013	ENSSTOG00000033183	-	97	65.101	Ictidomys_tridecemlineatus
ENSPPAG00000030439	LARP1B	99	80.665	ENSSTOG00000021917	-	94	80.665	Ictidomys_tridecemlineatus
ENSPPAG00000030439	LARP1B	96	74.143	ENSSTOG00000034510	-	91	70.201	Ictidomys_tridecemlineatus
ENSPPAG00000030439	LARP1B	99	85.285	ENSJJAG00000022360	Larp1b	99	85.285	Jaculus_jaculus
ENSPPAG00000030439	LARP1B	96	54.167	ENSKMAG00000011589	larp1b	84	55.098	Kryptolebias_marmoratus
ENSPPAG00000030439	LARP1B	97	56.189	ENSLBEG00000005655	larp1b	85	54.943	Labrus_bergylta
ENSPPAG00000030439	LARP1B	99	71.429	ENSLACG00000015247	LARP1B	100	68.448	Latimeria_chalumnae
ENSPPAG00000030439	LARP1B	99	63.368	ENSLOCG00000010684	larp1b	93	64.947	Lepisosteus_oculatus
ENSPPAG00000030439	LARP1B	99	91.369	ENSLAFG00000008473	-	99	91.867	Loxodonta_africana
ENSPPAG00000030439	LARP1B	70	93.103	ENSMFAG00000003306	-	94	93.103	Macaca_fascicularis
ENSPPAG00000030439	LARP1B	100	97.910	ENSMFAG00000002218	LARP1B	100	97.910	Macaca_fascicularis
ENSPPAG00000030439	LARP1B	100	97.910	ENSMMUG00000021347	LARP1B	100	97.910	Macaca_mulatta
ENSPPAG00000030439	LARP1B	91	98.333	ENSMNEG00000030406	LARP1B	100	98.333	Macaca_nemestrina
ENSPPAG00000030439	LARP1B	65	93.706	ENSMNEG00000027747	-	94	93.706	Macaca_nemestrina
ENSPPAG00000030439	LARP1B	100	93.545	ENSMLEG00000009306	LARP1B	100	93.545	Mandrillus_leucophaeus
ENSPPAG00000030439	LARP1B	99	55.966	ENSMAMG00000000081	larp1b	85	56.072	Mastacembelus_armatus
ENSPPAG00000030439	LARP1B	76	62.267	ENSMZEG00005002545	larp1b	94	60.733	Maylandia_zebra
ENSPPAG00000030439	LARP1B	94	62.930	ENSMGAG00000004809	LARP1B	98	62.804	Meleagris_gallopavo
ENSPPAG00000030439	LARP1B	100	88.358	ENSMAUG00000007879	-	100	88.358	Mesocricetus_auratus
ENSPPAG00000030439	LARP1B	100	93.134	ENSMICG00000036111	LARP1B	100	93.134	Microcebus_murinus
ENSPPAG00000030439	LARP1B	99	76.536	ENSMICG00000037883	-	97	76.257	Microcebus_murinus
ENSPPAG00000030439	LARP1B	98	70.196	ENSMICG00000028052	-	99	70.553	Microcebus_murinus
ENSPPAG00000030439	LARP1B	79	90.494	ENSMOCG00000001490	Larp1b	95	90.494	Microtus_ochrogaster
ENSPPAG00000030439	LARP1B	99	85.060	ENSMODG00000012300	LARP1B	81	85.605	Monodelphis_domestica
ENSPPAG00000030439	LARP1B	99	55.732	ENSMALG00000003638	larp1b	84	56.526	Monopterus_albus
ENSPPAG00000030439	LARP1B	100	87.164	MGP_CAROLIEiJ_G0024962	Larp1b	100	87.164	Mus_caroli
ENSPPAG00000030439	LARP1B	100	88.358	ENSMUSG00000025762	Larp1b	100	88.358	Mus_musculus
ENSPPAG00000030439	LARP1B	100	88.060	MGP_PahariEiJ_G0026403	Larp1b	100	88.060	Mus_pahari
ENSPPAG00000030439	LARP1B	100	88.358	MGP_SPRETEiJ_G0025897	Larp1b	100	88.358	Mus_spretus
ENSPPAG00000030439	LARP1B	98	92.401	ENSMPUG00000017365	LARP1B	81	89.727	Mustela_putorius_furo
ENSPPAG00000030439	LARP1B	96	82.547	ENSMLUG00000010229	LARP1B	97	82.547	Myotis_lucifugus
ENSPPAG00000030439	LARP1B	76	56.815	ENSNBRG00000023846	larp1b	77	56.550	Neolamprologus_brichardi
ENSPPAG00000030439	LARP1B	100	98.209	ENSNLEG00000013819	LARP1B	100	98.209	Nomascus_leucogenys
ENSPPAG00000030439	LARP1B	87	81.731	ENSMEUG00000010308	LARP1B	88	81.731	Notamacropus_eugenii
ENSPPAG00000030439	LARP1B	98	73.252	ENSOPRG00000005478	LARP1B	99	71.507	Ochotona_princeps
ENSPPAG00000030439	LARP1B	100	86.866	ENSODEG00000001292	-	100	86.866	Octodon_degus
ENSPPAG00000030439	LARP1B	96	55.603	ENSONIG00000012386	larp1b	93	55.460	Oreochromis_niloticus
ENSPPAG00000030439	LARP1B	98	91.185	ENSOCUG00000013330	LARP1B	98	87.432	Oryctolagus_cuniculus
ENSPPAG00000030439	LARP1B	97	55.952	ENSORLG00000017954	larp1b	82	56.074	Oryzias_latipes
ENSPPAG00000030439	LARP1B	97	55.844	ENSORLG00020013081	larp1b	82	55.965	Oryzias_latipes_hni
ENSPPAG00000030439	LARP1B	97	56.074	ENSORLG00015009580	larp1b	82	56.074	Oryzias_latipes_hsok
ENSPPAG00000030439	LARP1B	97	55.748	ENSOMEG00000004210	larp1b	82	55.857	Oryzias_melastigma
ENSPPAG00000030439	LARP1B	98	89.697	ENSOGAG00000005771	LARP1B	98	88.800	Otolemur_garnettii
ENSPPAG00000030439	LARP1B	100	88.974	ENSOARG00000015300	LARP1B	100	88.974	Ovis_aries
ENSPPAG00000030439	LARP1B	100	91.343	ENSPPRG00000002743	-	100	91.343	Panthera_pardus
ENSPPAG00000030439	LARP1B	100	91.343	ENSPTIG00000011225	LARP1B	100	91.343	Panthera_tigris_altaica
ENSPPAG00000030439	LARP1B	100	99.720	ENSPTRG00000016437	LARP1B	100	99.720	Pan_troglodytes
ENSPPAG00000030439	LARP1B	100	97.812	ENSPANG00000012488	LARP1B	100	97.812	Papio_anubis
ENSPPAG00000030439	LARP1B	96	51.007	ENSPKIG00000014360	larp1b	88	53.222	Paramormyrops_kingsleyae
ENSPPAG00000030439	LARP1B	96	77.324	ENSPSIG00000012885	LARP1B	93	76.871	Pelodiscus_sinensis
ENSPPAG00000030439	LARP1B	79	60.276	ENSPMGG00000007207	larp1b	84	60.138	Periophthalmus_magnuspinnatus
ENSPPAG00000030439	LARP1B	94	52.323	ENSPMAG00000002700	larp1b	94	53.254	Petromyzon_marinus
ENSPPAG00000030439	LARP1B	99	84.113	ENSPCIG00000026516	LARP1B	98	84.646	Phascolarctos_cinereus
ENSPPAG00000030439	LARP1B	97	56.092	ENSPFOG00000019519	larp1b	82	55.987	Poecilia_formosa
ENSPPAG00000030439	LARP1B	98	51.009	ENSPFOG00000022837	-	78	50.549	Poecilia_formosa
ENSPPAG00000030439	LARP1B	97	57.143	ENSPLAG00000007115	larp1b	82	56.926	Poecilia_latipinna
ENSPPAG00000030439	LARP1B	97	56.926	ENSPMEG00000001224	larp1b	81	56.710	Poecilia_mexicana
ENSPPAG00000030439	LARP1B	80	55.245	ENSPREG00000005955	-	93	53.199	Poecilia_reticulata
ENSPPAG00000030439	LARP1B	100	84.809	ENSPCAG00000007546	LARP1B	99	84.809	Procavia_capensis
ENSPPAG00000030439	LARP1B	100	92.239	ENSPCOG00000021874	LARP1B	99	93.793	Propithecus_coquereli
ENSPPAG00000030439	LARP1B	100	82.713	ENSPVAG00000005373	LARP1B	99	82.495	Pteropus_vampyrus
ENSPPAG00000030439	LARP1B	76	62.554	ENSPNYG00000017357	larp1b	94	61.206	Pundamilia_nyererei
ENSPPAG00000030439	LARP1B	96	55.740	ENSPNAG00000008823	larp1b	84	55.437	Pygocentrus_nattereri
ENSPPAG00000030439	LARP1B	100	89.552	ENSRNOG00000038366	Larp1b	100	89.552	Rattus_norvegicus
ENSPPAG00000030439	LARP1B	100	95.946	ENSRBIG00000039982	-	100	95.946	Rhinopithecus_bieti
ENSPPAG00000030439	LARP1B	100	88.060	ENSRBIG00000038568	-	92	88.060	Rhinopithecus_bieti
ENSPPAG00000030439	LARP1B	100	97.910	ENSRROG00000030771	LARP1B	100	97.910	Rhinopithecus_roxellana
ENSPPAG00000030439	LARP1B	100	78.507	ENSRROG00000038525	-	96	78.507	Rhinopithecus_roxellana
ENSPPAG00000030439	LARP1B	98	86.364	ENSSHAG00000014474	LARP1B	100	84.328	Sarcophilus_harrisii
ENSPPAG00000030439	LARP1B	96	56.048	ENSSMAG00000006347	larp1b	92	55.263	Scophthalmus_maximus
ENSPPAG00000030439	LARP1B	96	56.863	ENSSDUG00000004182	larp1b	82	56.284	Seriola_dumerili
ENSPPAG00000030439	LARP1B	78	60.055	ENSSLDG00000014613	larp1b	73	58.589	Seriola_lalandi_dorsalis
ENSPPAG00000030439	LARP1B	98	73.099	ENSSPUG00000011837	LARP1B	97	67.617	Sphenodon_punctatus
ENSPPAG00000030439	LARP1B	97	56.405	ENSSPAG00000017772	larp1b	82	56.297	Stegastes_partitus
ENSPPAG00000030439	LARP1B	73	55.967	ENSSSCG00000040491	-	99	75.862	Sus_scrofa
ENSPPAG00000030439	LARP1B	98	90.578	ENSSSCG00000034280	LARP1B	99	93.814	Sus_scrofa
ENSPPAG00000030439	LARP1B	89	69.819	ENSTGUG00000002098	-	96	66.818	Taeniopygia_guttata
ENSPPAG00000030439	LARP1B	98	52.293	ENSTRUG00000005612	larp1b	82	53.930	Takifugu_rubripes
ENSPPAG00000030439	LARP1B	96	53.291	ENSTNIG00000012398	larp1b	94	54.516	Tetraodon_nigroviridis
ENSPPAG00000030439	LARP1B	87	88.462	ENSTBEG00000004177	LARP1B	88	82.692	Tupaia_belangeri
ENSPPAG00000030439	LARP1B	100	79.694	ENSTTRG00000012984	LARP1B	99	79.476	Tursiops_truncatus
ENSPPAG00000030439	LARP1B	100	81.493	ENSUAMG00000016938	-	100	81.250	Ursus_americanus
ENSPPAG00000030439	LARP1B	100	90.273	ENSUMAG00000007373	LARP1B	98	90.273	Ursus_maritimus
ENSPPAG00000030439	LARP1B	99	78.711	ENSVPAG00000007223	LARP1B	99	77.949	Vicugna_pacos
ENSPPAG00000030439	LARP1B	100	90.492	ENSVVUG00000011307	LARP1B	100	90.000	Vulpes_vulpes
ENSPPAG00000030439	LARP1B	97	60.288	ENSXETG00000022512	larp1b	87	60.177	Xenopus_tropicalis
ENSPPAG00000030439	LARP1B	73	59.024	ENSXCOG00000004435	larp1b	68	59.375	Xiphophorus_couchianus
ENSPPAG00000030439	LARP1B	97	56.606	ENSXMAG00000008150	larp1b	81	56.742	Xiphophorus_maculatus