EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000031438 (Gene tree)
Gene ID: 100986002
Gene Symbol: PARN
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 189906 bases
Position: chr16:14787881-14977786
Accession: 100986002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000016771	R3H	PF01424.22	5.7e-05	1	1
ENSPPAP00000016759	R3H	PF01424.22	6.3e-05	1	1
ENSPPAP00000016773	RNA_bind	PF08675.11	1e-33	1	1
ENSPPAP00000016771	RNA_bind	PF08675.11	1.4e-33	1	1
ENSPPAP00000016776	RNA_bind	PF08675.11	1.5e-33	1	1
ENSPPAP00000016759	RNA_bind	PF08675.11	1.5e-33	1	1
ENSPPAP00000016759	CAF1	PF04857.20	3.8e-89	1	1
ENSPPAP00000016776	CAF1	PF04857.20	4.7e-78	1	1
ENSPPAP00000016771	CAF1	PF04857.20	5.5e-68	1	2
ENSPPAP00000016771	CAF1	PF04857.20	5.5e-68	2	2
ENSPPAP00000016773	CAF1	PF04857.20	1.9e-52	1	2
ENSPPAP00000016773	CAF1	PF04857.20	1.9e-52	2	2
ENSPPAP00000016780	CAF1	PF04857.20	8.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000039469	PARN-202	1782	-	ENSPPAP00000016771	593 (aa)	-	A0A2R9AHD7
ENSPPAT00000039478	PARN-205	198	-	ENSPPAP00000016780	65 (aa)	-	A0A2R9AM68
ENSPPAT00000039457	PARN-201	3064	XM_003832684	ENSPPAP00000016759	639 (aa)	XP_003832732	A0A2R9APG9
ENSPPAT00000039471	PARN-203	1395	-	ENSPPAP00000016773	464 (aa)	-	A0A2R9AIA9
ENSPPAT00000039474	PARN-204	1851	-	ENSPPAP00000016776	616 (aa)	-	A0A2R9AHE5

Gene Model

Click here to download ENSPPAG00000031438's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000031438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000031438	PARN	100	100.000	ENSG00000140694	PARN	100	100.000	Homo_sapiens
ENSPPAG00000031438	PARN	92	80.000	ENSAPOG00000019730	-	100	69.231	Acanthochromis_polyacanthus
ENSPPAG00000031438	PARN	100	96.610	ENSAMEG00000011208	PARN	100	92.500	Ailuropoda_melanoleuca
ENSPPAG00000031438	PARN	92	78.333	ENSACIG00000000619	parn	83	76.306	Amphilophus_citrinellus
ENSPPAG00000031438	PARN	91	77.966	ENSAOCG00000003465	parn	84	73.604	Amphiprion_ocellaris
ENSPPAG00000031438	PARN	74	77.568	ENSAPEG00000010661	parn	91	77.568	Amphiprion_percula
ENSPPAG00000031438	PARN	94	76.271	ENSATEG00000004661	parn	88	72.052	Anabas_testudineus
ENSPPAG00000031438	PARN	99	87.037	ENSAPLG00000013914	PARN	99	84.858	Anas_platyrhynchos
ENSPPAG00000031438	PARN	100	89.831	ENSACAG00000004973	PARN	100	78.769	Anolis_carolinensis
ENSPPAG00000031438	PARN	100	100.000	ENSANAG00000031516	PARN	100	100.000	Aotus_nancymaae
ENSPPAG00000031438	PARN	91	77.966	ENSACLG00000004742	parn	84	74.701	Astatotilapia_calliptera
ENSPPAG00000031438	PARN	91	79.661	ENSAMXG00000012390	parn	100	66.816	Astyanax_mexicanus
ENSPPAG00000031438	PARN	100	98.305	ENSBTAG00000018097	PARN	100	93.599	Bos_taurus
ENSPPAG00000031438	PARN	100	100.000	ENSCJAG00000015866	PARN	100	100.000	Callithrix_jacchus
ENSPPAG00000031438	PARN	100	94.915	ENSCAFG00000018795	PARN	100	92.645	Canis_familiaris
ENSPPAG00000031438	PARN	100	96.610	ENSCAFG00020024126	PARN	100	92.645	Canis_lupus_dingo
ENSPPAG00000031438	PARN	100	98.305	ENSCHIG00000018143	PARN	100	94.053	Capra_hircus
ENSPPAG00000031438	PARN	60	77.500	ENSCAPG00000007984	PARN	78	65.284	Cavia_aperea
ENSPPAG00000031438	PARN	100	98.305	ENSCPOG00000002263	PARN	100	91.080	Cavia_porcellus
ENSPPAG00000031438	PARN	100	100.000	ENSCCAG00000030367	PARN	100	100.000	Cebus_capucinus
ENSPPAG00000031438	PARN	52	35.862	ENSCATG00000033196	PNLDC1	70	35.862	Cercocebus_atys
ENSPPAG00000031438	PARN	91	100.000	ENSCATG00000041368	PARN	100	100.000	Cercocebus_atys
ENSPPAG00000031438	PARN	100	96.610	ENSCLAG00000015406	PARN	99	90.923	Chinchilla_lanigera
ENSPPAG00000031438	PARN	100	100.000	ENSCSAG00000008142	PARN	100	98.592	Chlorocebus_sabaeus
ENSPPAG00000031438	PARN	98	98.077	ENSCHOG00000007014	PARN	100	76.582	Choloepus_hoffmanni
ENSPPAG00000031438	PARN	89	85.283	ENSCPBG00000006609	PARN	97	86.059	Chrysemys_picta_bellii
ENSPPAG00000031438	PARN	88	47.368	ENSCING00000010142	-	99	44.465	Ciona_intestinalis
ENSPPAG00000031438	PARN	100	100.000	ENSCANG00000028849	-	100	100.000	Colobus_angolensis_palliatus
ENSPPAG00000031438	PARN	91	100.000	ENSCANG00000023734	-	100	86.818	Colobus_angolensis_palliatus
ENSPPAG00000031438	PARN	100	96.610	ENSCGRG00001012096	Parn	100	85.514	Cricetulus_griseus_chok1gshd
ENSPPAG00000031438	PARN	100	96.610	ENSCGRG00000004939	Parn	100	85.514	Cricetulus_griseus_crigri
ENSPPAG00000031438	PARN	94	79.661	ENSCSEG00000002064	parn	100	64.706	Cynoglossus_semilaevis
ENSPPAG00000031438	PARN	91	77.966	ENSCVAG00000014848	parn	83	73.630	Cyprinodon_variegatus
ENSPPAG00000031438	PARN	100	71.186	ENSDARG00000102634	parn	100	64.286	Danio_rerio
ENSPPAG00000031438	PARN	100	98.305	ENSDNOG00000000833	PARN	100	92.958	Dasypus_novemcinctus
ENSPPAG00000031438	PARN	91	96.610	ENSDORG00000027812	-	100	87.727	Dipodomys_ordii
ENSPPAG00000031438	PARN	92	95.000	ENSETEG00000014828	-	78	94.297	Echinops_telfairi
ENSPPAG00000031438	PARN	76	52.394	ENSEBUG00000007052	PARN	70	70.982	Eptatretus_burgeri
ENSPPAG00000031438	PARN	56	30.086	ENSEBUG00000008118	PNLDC1	61	30.086	Eptatretus_burgeri
ENSPPAG00000031438	PARN	100	98.305	ENSEASG00005011400	PARN	100	92.488	Equus_asinus_asinus
ENSPPAG00000031438	PARN	100	96.610	ENSECAG00000017792	PARN	100	92.332	Equus_caballus
ENSPPAG00000031438	PARN	92	96.667	ENSEEUG00000010370	PARN	86	84.163	Erinaceus_europaeus
ENSPPAG00000031438	PARN	91	79.661	ENSELUG00000013139	parn	77	72.344	Esox_lucius
ENSPPAG00000031438	PARN	100	96.610	ENSFCAG00000044961	PARN	100	96.610	Felis_catus
ENSPPAG00000031438	PARN	98	88.462	ENSFALG00000003911	PARN	98	83.703	Ficedula_albicollis
ENSPPAG00000031438	PARN	100	98.305	ENSFDAG00000009234	PARN	100	90.610	Fukomys_damarensis
ENSPPAG00000031438	PARN	98	71.875	ENSFHEG00000013738	parn	100	71.875	Fundulus_heteroclitus
ENSPPAG00000031438	PARN	91	77.966	ENSGMOG00000003231	parn	97	77.239	Gadus_morhua
ENSPPAG00000031438	PARN	100	91.525	ENSGALG00000003091	PARN	100	82.582	Gallus_gallus
ENSPPAG00000031438	PARN	91	79.661	ENSGAFG00000011061	parn	84	72.819	Gambusia_affinis
ENSPPAG00000031438	PARN	91	74.576	ENSGACG00000019501	parn	100	68.567	Gasterosteus_aculeatus
ENSPPAG00000031438	PARN	70	79.755	ENSGAGG00000023281	PARN	83	81.818	Gopherus_agassizii
ENSPPAG00000031438	PARN	100	100.000	ENSGGOG00000025224	PARN	100	100.000	Gorilla_gorilla
ENSPPAG00000031438	PARN	91	77.966	ENSHBUG00000017906	parn	90	77.467	Haplochromis_burtoni
ENSPPAG00000031438	PARN	100	98.305	ENSHGLG00000010886	PARN	100	90.923	Heterocephalus_glaber_female
ENSPPAG00000031438	PARN	100	98.305	ENSHGLG00100014659	PARN	100	90.923	Heterocephalus_glaber_male
ENSPPAG00000031438	PARN	80	84.615	ENSHCOG00000008683	parn	91	73.724	Hippocampus_comes
ENSPPAG00000031438	PARN	91	69.492	ENSIPUG00000012401	parn	84	62.995	Ictalurus_punctatus
ENSPPAG00000031438	PARN	100	96.610	ENSSTOG00000007519	PARN	100	91.236	Ictidomys_tridecemlineatus
ENSPPAG00000031438	PARN	100	98.305	ENSJJAG00000023049	Parn	100	87.793	Jaculus_jaculus
ENSPPAG00000031438	PARN	91	76.271	ENSKMAG00000009462	parn	84	73.891	Kryptolebias_marmoratus
ENSPPAG00000031438	PARN	91	77.966	ENSLBEG00000009167	parn	90	72.835	Labrus_bergylta
ENSPPAG00000031438	PARN	79	78.770	ENSLACG00000004207	PARN	100	77.830	Latimeria_chalumnae
ENSPPAG00000031438	PARN	91	81.356	ENSLOCG00000000715	parn	87	73.849	Lepisosteus_oculatus
ENSPPAG00000031438	PARN	100	98.305	ENSLAFG00000015036	PARN	100	92.801	Loxodonta_africana
ENSPPAG00000031438	PARN	100	100.000	ENSMFAG00000044852	PARN	100	100.000	Macaca_fascicularis
ENSPPAG00000031438	PARN	100	100.000	ENSMMUG00000018849	PARN	100	100.000	Macaca_mulatta
ENSPPAG00000031438	PARN	100	100.000	ENSMNEG00000045108	PARN	100	100.000	Macaca_nemestrina
ENSPPAG00000031438	PARN	100	100.000	ENSMLEG00000031743	PARN	100	100.000	Mandrillus_leucophaeus
ENSPPAG00000031438	PARN	91	77.966	ENSMAMG00000006939	parn	84	72.819	Mastacembelus_armatus
ENSPPAG00000031438	PARN	91	77.966	ENSMZEG00005013590	parn	90	77.239	Maylandia_zebra
ENSPPAG00000031438	PARN	94	100.000	ENSMGAG00000001004	PARN	95	82.708	Meleagris_gallopavo
ENSPPAG00000031438	PARN	95	94.286	ENSMAUG00000008025	Parn	100	80.247	Mesocricetus_auratus
ENSPPAG00000031438	PARN	100	98.462	ENSMICG00000016053	PARN	100	98.462	Microcebus_murinus
ENSPPAG00000031438	PARN	91	94.915	ENSMOCG00000022211	Parn	100	90.891	Microtus_ochrogaster
ENSPPAG00000031438	PARN	91	79.661	ENSMMOG00000011333	parn	87	76.262	Mola_mola
ENSPPAG00000031438	PARN	92	90.000	ENSMODG00000004915	PARN	99	94.556	Monodelphis_domestica
ENSPPAG00000031438	PARN	91	76.667	ENSMALG00000019426	parn	91	79.143	Monopterus_albus
ENSPPAG00000031438	PARN	100	94.915	MGP_CAROLIEiJ_G0020466	Parn	100	86.228	Mus_caroli
ENSPPAG00000031438	PARN	100	93.220	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSPPAG00000031438	PARN	100	96.610	MGP_PahariEiJ_G0016172	Parn	100	86.072	Mus_pahari
ENSPPAG00000031438	PARN	100	94.915	MGP_SPRETEiJ_G0021361	Parn	100	86.228	Mus_spretus
ENSPPAG00000031438	PARN	100	98.305	ENSMPUG00000014464	PARN	100	92.645	Mustela_putorius_furo
ENSPPAG00000031438	PARN	91	94.915	ENSMLUG00000005414	PARN	100	94.534	Myotis_lucifugus
ENSPPAG00000031438	PARN	91	98.305	ENSNGAG00000024082	-	100	88.182	Nannospalax_galili
ENSPPAG00000031438	PARN	91	77.966	ENSNBRG00000006805	parn	90	76.966	Neolamprologus_brichardi
ENSPPAG00000031438	PARN	100	100.000	ENSNLEG00000010241	PARN	100	100.000	Nomascus_leucogenys
ENSPPAG00000031438	PARN	93	92.308	ENSMEUG00000008178	-	100	60.918	Notamacropus_eugenii
ENSPPAG00000031438	PARN	98	98.077	ENSOPRG00000012187	PARN	100	86.076	Ochotona_princeps
ENSPPAG00000031438	PARN	100	98.305	ENSODEG00000001617	PARN	100	82.087	Octodon_degus
ENSPPAG00000031438	PARN	100	77.966	ENSONIG00000000151	parn	100	69.892	Oreochromis_niloticus
ENSPPAG00000031438	PARN	82	82.415	ENSOANG00000020155	-	97	82.940	Ornithorhynchus_anatinus
ENSPPAG00000031438	PARN	99	91.352	ENSOCUG00000000322	PARN	100	91.352	Oryctolagus_cuniculus
ENSPPAG00000031438	PARN	100	76.923	ENSORLG00000024893	-	100	67.873	Oryzias_latipes
ENSPPAG00000031438	PARN	93	79.661	ENSORLG00020010313	parn	88	70.820	Oryzias_latipes_hni
ENSPPAG00000031438	PARN	93	79.661	ENSORLG00015000300	parn	88	70.820	Oryzias_latipes_hsok
ENSPPAG00000031438	PARN	91	79.661	ENSOMEG00000019555	parn	97	67.421	Oryzias_melastigma
ENSPPAG00000031438	PARN	92	98.333	ENSOGAG00000014626	PARN	100	94.343	Otolemur_garnettii
ENSPPAG00000031438	PARN	91	98.305	ENSOARG00000007574	PARN	100	97.773	Ovis_aries
ENSPPAG00000031438	PARN	100	96.610	ENSPPRG00000018583	PARN	100	96.610	Panthera_pardus
ENSPPAG00000031438	PARN	100	96.610	ENSPTIG00000012135	PARN	100	96.610	Panthera_tigris_altaica
ENSPPAG00000031438	PARN	100	100.000	ENSPTRG00000007792	PARN	100	100.000	Pan_troglodytes
ENSPPAG00000031438	PARN	100	100.000	ENSPANG00000020099	PARN	100	100.000	Papio_anubis
ENSPPAG00000031438	PARN	96	79.661	ENSPKIG00000022807	parn	95	67.370	Paramormyrops_kingsleyae
ENSPPAG00000031438	PARN	98	89.831	ENSPSIG00000014804	PARN	100	83.737	Pelodiscus_sinensis
ENSPPAG00000031438	PARN	91	76.271	ENSPMGG00000014431	parn	75	74.770	Periophthalmus_magnuspinnatus
ENSPPAG00000031438	PARN	100	94.915	ENSPEMG00000018439	Parn	100	83.568	Peromyscus_maniculatus_bairdii
ENSPPAG00000031438	PARN	91	57.627	ENSPMAG00000003956	parn	99	67.500	Petromyzon_marinus
ENSPPAG00000031438	PARN	100	92.308	ENSPCIG00000001259	PARN	100	92.308	Phascolarctos_cinereus
ENSPPAG00000031438	PARN	91	79.661	ENSPFOG00000012823	parn	84	72.727	Poecilia_formosa
ENSPPAG00000031438	PARN	91	79.661	ENSPLAG00000006395	parn	84	72.896	Poecilia_latipinna
ENSPPAG00000031438	PARN	91	79.661	ENSPMEG00000007711	parn	84	73.064	Poecilia_mexicana
ENSPPAG00000031438	PARN	91	79.661	ENSPREG00000000147	parn	84	72.727	Poecilia_reticulata
ENSPPAG00000031438	PARN	100	98.771	ENSPPYG00000007123	PARN	100	98.752	Pongo_abelii
ENSPPAG00000031438	PARN	93	96.154	ENSPCAG00000001741	PARN	100	82.673	Procavia_capensis
ENSPPAG00000031438	PARN	100	98.462	ENSPCOG00000019292	PARN	100	98.462	Propithecus_coquereli
ENSPPAG00000031438	PARN	98	98.077	ENSPVAG00000002547	PARN	100	89.557	Pteropus_vampyrus
ENSPPAG00000031438	PARN	91	77.966	ENSPNYG00000006835	parn	90	74.488	Pundamilia_nyererei
ENSPPAG00000031438	PARN	84	73.371	ENSPNAG00000018905	parn	86	73.371	Pygocentrus_nattereri
ENSPPAG00000031438	PARN	100	93.220	ENSRNOG00000002912	Parn	98	87.879	Rattus_norvegicus
ENSPPAG00000031438	PARN	72	98.198	ENSRBIG00000018726	PARN	100	98.198	Rhinopithecus_bieti
ENSPPAG00000031438	PARN	92	98.333	ENSRROG00000020116	-	86	98.361	Rhinopithecus_roxellana
ENSPPAG00000031438	PARN	72	98.198	ENSRROG00000011162	-	100	98.198	Rhinopithecus_roxellana
ENSPPAG00000031438	PARN	100	100.000	ENSSBOG00000034726	PARN	100	100.000	Saimiri_boliviensis_boliviensis
ENSPPAG00000031438	PARN	83	88.889	ENSSHAG00000008493	PARN	94	93.780	Sarcophilus_harrisii
ENSPPAG00000031438	PARN	94	79.661	ENSSFOG00015014165	parn	94	73.208	Scleropages_formosus
ENSPPAG00000031438	PARN	91	76.271	ENSSMAG00000000685	parn	100	63.134	Scophthalmus_maximus
ENSPPAG00000031438	PARN	91	76.271	ENSSDUG00000014555	parn	83	73.379	Seriola_dumerili
ENSPPAG00000031438	PARN	91	76.271	ENSSLDG00000007603	-	100	64.253	Seriola_lalandi_dorsalis
ENSPPAG00000031438	PARN	91	80.172	ENSSARG00000014339	PARN	100	80.172	Sorex_araneus
ENSPPAG00000031438	PARN	100	89.831	ENSSPUG00000007719	PARN	100	85.133	Sphenodon_punctatus
ENSPPAG00000031438	PARN	91	77.966	ENSSPAG00000007095	parn	86	74.719	Stegastes_partitus
ENSPPAG00000031438	PARN	100	98.305	ENSSSCG00000007878	PARN	89	92.488	Sus_scrofa
ENSPPAG00000031438	PARN	99	87.037	ENSTGUG00000004971	PARN	99	83.438	Taeniopygia_guttata
ENSPPAG00000031438	PARN	55	30.556	ENSTGUG00000011418	PNLDC1	68	30.556	Taeniopygia_guttata
ENSPPAG00000031438	PARN	100	71.212	ENSTRUG00000015208	-	94	71.212	Takifugu_rubripes
ENSPPAG00000031438	PARN	100	79.661	ENSTNIG00000008252	parn	100	69.397	Tetraodon_nigroviridis
ENSPPAG00000031438	PARN	91	79.483	ENSTBEG00000010407	PARN	100	79.483	Tupaia_belangeri
ENSPPAG00000031438	PARN	98	98.077	ENSTTRG00000002843	PARN	100	88.766	Tursiops_truncatus
ENSPPAG00000031438	PARN	67	85.782	ENSUAMG00000008283	PARN	94	82.297	Ursus_americanus
ENSPPAG00000031438	PARN	100	98.305	ENSUMAG00000004527	PARN	100	92.958	Ursus_maritimus
ENSPPAG00000031438	PARN	95	98.077	ENSVPAG00000008968	PARN	100	89.577	Vicugna_pacos
ENSPPAG00000031438	PARN	100	96.610	ENSVVUG00000019509	PARN	100	93.114	Vulpes_vulpes
ENSPPAG00000031438	PARN	100	81.967	ENSXETG00000010994	parn	100	82.890	Xenopus_tropicalis
ENSPPAG00000031438	PARN	91	79.661	ENSXCOG00000015990	parn	96	69.036	Xiphophorus_couchianus
ENSPPAG00000031438	PARN	91	79.661	ENSXMAG00000014783	parn	84	73.064	Xiphophorus_maculatus