EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000031619 (Gene tree)
Gene ID: 100993466
Gene Symbol: SMG7
Alias: -
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 82924 bases
Position: chr1:163159362-163242285
Accession: 100993466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000017222	EST1	PF10374.9	1e-24	1	1
ENSPPAP00000017210	EST1	PF10374.9	1.1e-24	1	1
ENSPPAP00000017240	EST1	PF10374.9	2.8e-22	1	1
ENSPPAP00000017222	EST1_DNA_bind	PF10373.9	2.8e-55	1	1
ENSPPAP00000017210	EST1_DNA_bind	PF10373.9	2.9e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000039911	SMG7-201	7563	XM_003815613	ENSPPAP00000017210	1145 (aa)	XP_003815661	A0A2R9ANF7
ENSPPAT00000039926	SMG7-203	219	-	ENSPPAP00000017224	73 (aa)	-	A0A2R9AQR6
ENSPPAT00000039942	SMG7-204	555	-	ENSPPAP00000017240	184 (aa)	-	A0A2R9ANI5
ENSPPAT00000039923	SMG7-202	5948	XM_003815611	ENSPPAP00000017222	1137 (aa)	XP_003815659	A0A2R9AIN4

Gene Model

Click here to download ENSPPAG00000031619's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000031619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000031619	SMG7	100	99.825	ENSG00000116698	SMG7	100	99.825	Homo_sapiens
ENSPPAG00000031619	SMG7	86	93.038	ENSAPOG00000009611	smg7	95	74.735	Acanthochromis_polyacanthus
ENSPPAG00000031619	SMG7	100	97.031	ENSAMEG00000002357	SMG7	100	97.031	Ailuropoda_melanoleuca
ENSPPAG00000031619	SMG7	70	94.574	ENSACIG00000015152	smg7	100	65.062	Amphilophus_citrinellus
ENSPPAG00000031619	SMG7	90	89.697	ENSAOCG00000013538	smg7	99	67.009	Amphiprion_ocellaris
ENSPPAG00000031619	SMG7	90	89.697	ENSAPEG00000007851	smg7	99	66.866	Amphiprion_percula
ENSPPAG00000031619	SMG7	90	90.303	ENSATEG00000006931	smg7	99	66.384	Anabas_testudineus
ENSPPAG00000031619	SMG7	100	89.151	ENSAPLG00000015811	SMG7	100	88.976	Anas_platyrhynchos
ENSPPAG00000031619	SMG7	100	87.706	ENSACAG00000014989	SMG7	96	88.225	Anolis_carolinensis
ENSPPAG00000031619	SMG7	100	99.457	ENSANAG00000028114	SMG7	100	99.457	Aotus_nancymaae
ENSPPAG00000031619	SMG7	89	90.798	ENSACLG00000022079	smg7	99	66.495	Astatotilapia_calliptera
ENSPPAG00000031619	SMG7	89	91.411	ENSAMXG00000020809	smg7	99	68.202	Astyanax_mexicanus
ENSPPAG00000031619	SMG7	100	96.306	ENSBTAG00000008003	SMG7	100	96.306	Bos_taurus
ENSPPAG00000031619	SMG7	100	98.515	ENSCJAG00000005135	SMG7	100	98.505	Callithrix_jacchus
ENSPPAG00000031619	SMG7	100	93.537	ENSCAFG00000013276	SMG7	94	93.537	Canis_familiaris
ENSPPAG00000031619	SMG7	100	97.293	ENSCAFG00020015475	SMG7	98	98.333	Canis_lupus_dingo
ENSPPAG00000031619	SMG7	100	92.664	ENSCHIG00000018192	SMG7	96	92.664	Capra_hircus
ENSPPAG00000031619	SMG7	100	97.625	ENSTSYG00000002667	SMG7	100	97.625	Carlito_syrichta
ENSPPAG00000031619	SMG7	100	93.712	ENSCPOG00000008906	SMG7	97	93.712	Cavia_porcellus
ENSPPAG00000031619	SMG7	100	98.865	ENSCCAG00000028596	SMG7	100	98.865	Cebus_capucinus
ENSPPAG00000031619	SMG7	100	99.651	ENSCATG00000011063	SMG7	100	99.651	Cercocebus_atys
ENSPPAG00000031619	SMG7	100	96.834	ENSCLAG00000010751	SMG7	100	96.834	Chinchilla_lanigera
ENSPPAG00000031619	SMG7	100	95.459	ENSCSAG00000012654	SMG7	94	95.459	Chlorocebus_sabaeus
ENSPPAG00000031619	SMG7	95	85.819	ENSCHOG00000010522	SMG7	93	86.185	Choloepus_hoffmanni
ENSPPAG00000031619	SMG7	100	92.080	ENSCPBG00000015724	SMG7	100	91.674	Chrysemys_picta_bellii
ENSPPAG00000031619	SMG7	85	51.829	ENSCING00000006953	-	94	53.746	Ciona_intestinalis
ENSPPAG00000031619	SMG7	100	99.563	ENSCANG00000015680	SMG7	100	99.563	Colobus_angolensis_palliatus
ENSPPAG00000031619	SMG7	100	95.251	ENSCGRG00001013705	Smg7	100	95.251	Cricetulus_griseus_chok1gshd
ENSPPAG00000031619	SMG7	99	95.209	ENSCGRG00000018401	Smg7	100	95.209	Cricetulus_griseus_crigri
ENSPPAG00000031619	SMG7	85	89.172	ENSCSEG00000007392	-	89	89.172	Cynoglossus_semilaevis
ENSPPAG00000031619	SMG7	80	88.000	ENSCVAG00000011842	smg7	98	69.500	Cyprinodon_variegatus
ENSPPAG00000031619	SMG7	89	91.411	ENSDARG00000060767	smg7	99	67.934	Danio_rerio
ENSPPAG00000031619	SMG7	100	92.751	ENSDORG00000007331	Smg7	100	88.880	Dipodomys_ordii
ENSPPAG00000031619	SMG7	97	92.238	ENSETEG00000002654	SMG7	100	88.348	Echinops_telfairi
ENSPPAG00000031619	SMG7	100	93.974	ENSEASG00005006524	SMG7	100	90.059	Equus_asinus_asinus
ENSPPAG00000031619	SMG7	100	94.061	ENSECAG00000004313	SMG7	99	93.966	Equus_caballus
ENSPPAG00000031619	SMG7	97	92.876	ENSEEUG00000002024	SMG7	91	92.876	Erinaceus_europaeus
ENSPPAG00000031619	SMG7	89	91.463	ENSELUG00000010293	smg7	99	66.048	Esox_lucius
ENSPPAG00000031619	SMG7	100	93.712	ENSFCAG00000010900	SMG7	99	93.408	Felis_catus
ENSPPAG00000031619	SMG7	100	86.285	ENSFALG00000003047	SMG7	98	86.198	Ficedula_albicollis
ENSPPAG00000031619	SMG7	100	93.450	ENSFDAG00000012121	SMG7	97	93.450	Fukomys_damarensis
ENSPPAG00000031619	SMG7	90	86.667	ENSFHEG00000011073	smg7	99	64.055	Fundulus_heteroclitus
ENSPPAG00000031619	SMG7	90	87.273	ENSGMOG00000004916	smg7	85	73.673	Gadus_morhua
ENSPPAG00000031619	SMG7	100	89.510	ENSGALG00000004667	SMG7	100	89.336	Gallus_gallus
ENSPPAG00000031619	SMG7	95	85.475	ENSGAFG00000019000	smg7	99	64.569	Gambusia_affinis
ENSPPAG00000031619	SMG7	85	91.720	ENSGACG00000001634	smg7	99	63.357	Gasterosteus_aculeatus
ENSPPAG00000031619	SMG7	97	87.363	ENSGAGG00000024208	-	94	87.363	Gopherus_agassizii
ENSPPAG00000031619	SMG7	100	99.738	ENSGGOG00000002342	SMG7	100	99.738	Gorilla_gorilla
ENSPPAG00000031619	SMG7	89	90.798	ENSHBUG00000003726	smg7	94	72.589	Haplochromis_burtoni
ENSPPAG00000031619	SMG7	100	97.361	ENSHGLG00000009353	SMG7	100	97.361	Heterocephalus_glaber_female
ENSPPAG00000031619	SMG7	100	83.144	ENSHGLG00100004878	-	100	82.140	Heterocephalus_glaber_male
ENSPPAG00000031619	SMG7	100	97.449	ENSHGLG00100009637	-	100	97.449	Heterocephalus_glaber_male
ENSPPAG00000031619	SMG7	96	79.096	ENSHCOG00000012804	-	89	84.337	Hippocampus_comes
ENSPPAG00000031619	SMG7	84	94.194	ENSIPUG00000016997	smg7	99	68.674	Ictalurus_punctatus
ENSPPAG00000031619	SMG7	100	94.148	ENSSTOG00000000401	SMG7	100	94.107	Ictidomys_tridecemlineatus
ENSPPAG00000031619	SMG7	96	85.311	ENSJJAG00000000309	-	100	85.311	Jaculus_jaculus
ENSPPAG00000031619	SMG7	100	91.790	ENSJJAG00000012351	Smg7	100	87.869	Jaculus_jaculus
ENSPPAG00000031619	SMG7	72	93.182	ENSKMAG00000004900	smg7	96	70.500	Kryptolebias_marmoratus
ENSPPAG00000031619	SMG7	88	90.062	ENSLBEG00000002983	smg7	99	66.523	Labrus_bergylta
ENSPPAG00000031619	SMG7	52	63.000	ENSLBEG00000005220	-	75	63.000	Labrus_bergylta
ENSPPAG00000031619	SMG7	90	90.964	ENSLACG00000000972	SMG7	99	75.608	Latimeria_chalumnae
ENSPPAG00000031619	SMG7	88	93.827	ENSLOCG00000002010	smg7	99	66.998	Lepisosteus_oculatus
ENSPPAG00000031619	SMG7	100	93.624	ENSLAFG00000008186	SMG7	96	93.624	Loxodonta_africana
ENSPPAG00000031619	SMG7	100	99.563	ENSMFAG00000031653	SMG7	100	99.563	Macaca_fascicularis
ENSPPAG00000031619	SMG7	100	99.651	ENSMMUG00000018458	SMG7	99	98.760	Macaca_mulatta
ENSPPAG00000031619	SMG7	100	99.651	ENSMNEG00000034798	SMG7	100	99.651	Macaca_nemestrina
ENSPPAG00000031619	SMG7	100	99.651	ENSMLEG00000037170	SMG7	100	99.651	Mandrillus_leucophaeus
ENSPPAG00000031619	SMG7	89	90.184	ENSMAMG00000018733	smg7	85	65.571	Mastacembelus_armatus
ENSPPAG00000031619	SMG7	89	90.798	ENSMZEG00005015247	smg7	99	66.068	Maylandia_zebra
ENSPPAG00000031619	SMG7	97	89.398	ENSMGAG00000001561	SMG7	98	89.218	Meleagris_gallopavo
ENSPPAG00000031619	SMG7	100	95.515	ENSMAUG00000019484	Smg7	100	95.515	Mesocricetus_auratus
ENSPPAG00000031619	SMG7	100	98.593	ENSMICG00000007145	SMG7	100	98.593	Microcebus_murinus
ENSPPAG00000031619	SMG7	100	95.515	ENSMOCG00000020748	Smg7	100	95.515	Microtus_ochrogaster
ENSPPAG00000031619	SMG7	88	89.441	ENSMMOG00000001524	smg7	99	64.589	Mola_mola
ENSPPAG00000031619	SMG7	92	93.359	ENSMODG00000007139	SMG7	99	93.359	Monodelphis_domestica
ENSPPAG00000031619	SMG7	90	89.697	ENSMALG00000000061	smg7	93	66.352	Monopterus_albus
ENSPPAG00000031619	SMG7	100	95.163	MGP_CAROLIEiJ_G0014704	Smg7	100	94.811	Mus_caroli
ENSPPAG00000031619	SMG7	100	95.075	ENSMUSG00000042772	Smg7	100	95.075	Mus_musculus
ENSPPAG00000031619	SMG7	100	95.251	MGP_PahariEiJ_G0027940	Smg7	100	95.251	Mus_pahari
ENSPPAG00000031619	SMG7	100	95.163	MGP_SPRETEiJ_G0015511	Smg7	100	95.163	Mus_spretus
ENSPPAG00000031619	SMG7	100	93.537	ENSMPUG00000011732	SMG7	95	93.537	Mustela_putorius_furo
ENSPPAG00000031619	SMG7	100	92.926	ENSMLUG00000015417	SMG7	96	92.926	Myotis_lucifugus
ENSPPAG00000031619	SMG7	100	96.394	ENSNGAG00000009836	Smg7	100	96.394	Nannospalax_galili
ENSPPAG00000031619	SMG7	98	61.478	ENSNBRG00000024343	smg7	96	70.476	Neolamprologus_brichardi
ENSPPAG00000031619	SMG7	100	99.825	ENSNLEG00000018018	SMG7	100	99.825	Nomascus_leucogenys
ENSPPAG00000031619	SMG7	71	92.683	ENSMEUG00000004681	SMG7	73	92.683	Notamacropus_eugenii
ENSPPAG00000031619	SMG7	85	96.178	ENSOPRG00000013942	SMG7	96	78.002	Ochotona_princeps
ENSPPAG00000031619	SMG7	100	97.361	ENSODEG00000010390	SMG7	100	97.361	Octodon_degus
ENSPPAG00000031619	SMG7	89	90.798	ENSONIG00000000277	smg7	99	66.096	Oreochromis_niloticus
ENSPPAG00000031619	SMG7	100	87.391	ENSOANG00000000994	SMG7	98	87.652	Ornithorhynchus_anatinus
ENSPPAG00000031619	SMG7	100	86.288	ENSOCUG00000005887	SMG7	90	86.463	Oryctolagus_cuniculus
ENSPPAG00000031619	SMG7	96	84.181	ENSORLG00000007314	smg7	80	84.181	Oryzias_latipes
ENSPPAG00000031619	SMG7	85	91.083	ENSORLG00020015779	smg7	81	83.333	Oryzias_latipes_hni
ENSPPAG00000031619	SMG7	88	88.889	ENSORLG00015012289	smg7	99	63.801	Oryzias_latipes_hsok
ENSPPAG00000031619	SMG7	85	91.083	ENSOMEG00000002328	smg7	99	62.331	Oryzias_melastigma
ENSPPAG00000031619	SMG7	97	92.870	ENSOGAG00000003107	SMG7	90	92.780	Otolemur_garnettii
ENSPPAG00000031619	SMG7	100	92.402	ENSOARG00000001352	SMG7	100	92.315	Ovis_aries
ENSPPAG00000031619	SMG7	100	97.977	ENSPPRG00000011222	SMG7	100	97.977	Panthera_pardus
ENSPPAG00000031619	SMG7	100	97.904	ENSPTIG00000007242	SMG7	100	97.904	Panthera_tigris_altaica
ENSPPAG00000031619	SMG7	100	100.000	ENSPTRG00000001764	SMG7	100	100.000	Pan_troglodytes
ENSPPAG00000031619	SMG7	100	99.648	ENSPANG00000004520	SMG7	100	99.648	Papio_anubis
ENSPPAG00000031619	SMG7	89	89.024	ENSPKIG00000007242	smg7	99	65.993	Paramormyrops_kingsleyae
ENSPPAG00000031619	SMG7	98	90.804	ENSPSIG00000012201	SMG7	100	90.536	Pelodiscus_sinensis
ENSPPAG00000031619	SMG7	59	57.000	ENSPMGG00000021833	smg7	89	57.500	Periophthalmus_magnuspinnatus
ENSPPAG00000031619	SMG7	86	86.076	ENSPMGG00000002179	-	90	83.951	Periophthalmus_magnuspinnatus
ENSPPAG00000031619	SMG7	100	91.441	ENSPEMG00000011315	Smg7	99	92.110	Peromyscus_maniculatus_bairdii
ENSPPAG00000031619	SMG7	100	93.717	ENSPCIG00000003786	SMG7	100	93.497	Phascolarctos_cinereus
ENSPPAG00000031619	SMG7	90	87.273	ENSPFOG00000019219	smg7	99	61.932	Poecilia_formosa
ENSPPAG00000031619	SMG7	90	87.273	ENSPLAG00000001446	smg7	99	64.686	Poecilia_latipinna
ENSPPAG00000031619	SMG7	90	87.273	ENSPMEG00000005218	smg7	99	63.968	Poecilia_mexicana
ENSPPAG00000031619	SMG7	90	86.667	ENSPREG00000019039	smg7	91	61.858	Poecilia_reticulata
ENSPPAG00000031619	SMG7	100	99.912	ENSPPYG00000000427	SMG7	100	99.912	Pongo_abelii
ENSPPAG00000031619	SMG7	97	81.966	ENSPCAG00000008360	SMG7	92	81.966	Procavia_capensis
ENSPPAG00000031619	SMG7	98	98.889	ENSPCOG00000011996	SMG7	100	94.547	Propithecus_coquereli
ENSPPAG00000031619	SMG7	85	98.077	ENSPVAG00000000851	SMG7	86	87.464	Pteropus_vampyrus
ENSPPAG00000031619	SMG7	89	90.798	ENSPNYG00000007643	smg7	99	66.266	Pundamilia_nyererei
ENSPPAG00000031619	SMG7	87	93.750	ENSPNAG00000011374	smg7	99	68.398	Pygocentrus_nattereri
ENSPPAG00000031619	SMG7	100	95.288	ENSRNOG00000027962	Smg7	100	95.288	Rattus_norvegicus
ENSPPAG00000031619	SMG7	100	99.563	ENSRBIG00000036316	SMG7	100	99.563	Rhinopithecus_bieti
ENSPPAG00000031619	SMG7	100	99.563	ENSRROG00000035719	SMG7	100	99.563	Rhinopithecus_roxellana
ENSPPAG00000031619	SMG7	100	98.777	ENSSBOG00000023454	SMG7	100	98.777	Saimiri_boliviensis_boliviensis
ENSPPAG00000031619	SMG7	100	93.152	ENSSHAG00000013147	SMG7	100	92.888	Sarcophilus_harrisii
ENSPPAG00000031619	SMG7	89	89.571	ENSSFOG00015017252	smg7	96	76.842	Scleropages_formosus
ENSPPAG00000031619	SMG7	90	89.697	ENSSMAG00000006067	smg7	99	66.150	Scophthalmus_maximus
ENSPPAG00000031619	SMG7	89	90.798	ENSSDUG00000017543	smg7	99	66.019	Seriola_dumerili
ENSPPAG00000031619	SMG7	90	89.759	ENSSLDG00000003750	-	95	94.304	Seriola_lalandi_dorsalis
ENSPPAG00000031619	SMG7	99	90.548	ENSSPUG00000002064	SMG7	99	90.371	Sphenodon_punctatus
ENSPPAG00000031619	SMG7	78	93.007	ENSSPAG00000008733	smg7	100	66.064	Stegastes_partitus
ENSPPAG00000031619	SMG7	100	93.755	ENSSSCG00000015558	SMG7	100	93.755	Sus_scrofa
ENSPPAG00000031619	SMG7	99	89.427	ENSTGUG00000003928	SMG7	100	89.339	Taeniopygia_guttata
ENSPPAG00000031619	SMG7	95	82.857	ENSTRUG00000003612	-	95	82.857	Takifugu_rubripes
ENSPPAG00000031619	SMG7	84	89.103	ENSTNIG00000002802	smg7	99	59.299	Tetraodon_nigroviridis
ENSPPAG00000031619	SMG7	78	96.610	ENSTBEG00000003220	SMG7	72	96.610	Tupaia_belangeri
ENSPPAG00000031619	SMG7	97	93.321	ENSTTRG00000014778	SMG7	91	93.321	Tursiops_truncatus
ENSPPAG00000031619	SMG7	96	93.516	ENSUAMG00000017473	SMG7	100	93.516	Ursus_americanus
ENSPPAG00000031619	SMG7	100	93.624	ENSUMAG00000016389	SMG7	100	93.624	Ursus_maritimus
ENSPPAG00000031619	SMG7	100	93.668	ENSVVUG00000008976	SMG7	100	93.668	Vulpes_vulpes
ENSPPAG00000031619	SMG7	88	89.506	ENSXETG00000012528	smg7	100	71.032	Xenopus_tropicalis
ENSPPAG00000031619	SMG7	90	87.879	ENSXMAG00000007123	smg7	99	64.635	Xiphophorus_maculatus