EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000032109 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 13904 bases
Position: chr19:766490-780393
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000017984	RRM_5	PF13893.6	4.6e-44	1	2
ENSPPAP00000017984	RRM_5	PF13893.6	4.6e-44	2	2
ENSPPAP00000017985	RRM_5	PF13893.6	4.8e-38	1	2
ENSPPAP00000017985	RRM_5	PF13893.6	4.8e-38	2	2
ENSPPAP00000017984	RRM_1	PF00076.22	1.5e-17	1	2
ENSPPAP00000017984	RRM_1	PF00076.22	1.5e-17	2	2
ENSPPAP00000017985	RRM_1	PF00076.22	2.1e-14	1	2
ENSPPAP00000017985	RRM_1	PF00076.22	2.1e-14	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000040706	-	594	-	ENSPPAP00000017984	197 (aa)	-	A0A2R9ASX9
ENSPPAT00000040707	-	570	-	ENSPPAP00000017985	189 (aa)	-	A0A2R9AQF5

Gene Model

Click here to download ENSPPAG00000032109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000032109's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000032109	-	59	31.897	ENSPPAG00000032487	NONO	63	31.481
ENSPPAG00000032109	-	100	79.899	ENSPPAG00000011962	-	100	79.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000032109	-	100	100.000	ENSG00000011304	PTBP1	100	100.000	Homo_sapiens
ENSPPAG00000032109	-	100	72.632	ENSACLG00000001885	ptbp2b	99	77.596	Astatotilapia_calliptera
ENSPPAG00000032109	-	94	99.459	ENSCJAG00000020162	-	89	99.459	Callithrix_jacchus
ENSPPAG00000032109	-	87	83.636	ENSCAPG00000009749	-	51	83.636	Cavia_aperea
ENSPPAG00000032109	-	90	30.526	ENSCAPG00000013604	HNRNPLL	62	30.526	Cavia_aperea
ENSPPAG00000032109	-	100	99.492	ENSCCAG00000025811	-	100	99.492	Cebus_capucinus
ENSPPAG00000032109	-	100	100.000	ENSCATG00000033337	-	100	100.000	Cercocebus_atys
ENSPPAG00000032109	-	94	65.405	ENSCING00000002002	-	92	65.405	Ciona_intestinalis
ENSPPAG00000032109	-	100	95.939	ENSCANG00000005173	-	100	95.939	Colobus_angolensis_palliatus
ENSPPAG00000032109	-	98	87.113	ENSCANG00000040666	-	98	87.113	Colobus_angolensis_palliatus
ENSPPAG00000032109	-	98	100.000	ENSCANG00000038259	PTBP1	100	100.000	Colobus_angolensis_palliatus
ENSPPAG00000032109	-	98	88.083	ENSCGRG00000006229	-	98	88.083	Cricetulus_griseus_crigri
ENSPPAG00000032109	-	92	72.254	ENSCVAG00000021593	-	97	72.254	Cyprinodon_variegatus
ENSPPAG00000032109	-	94	81.622	ENSDARG00000031907	ptbp1b	64	81.119	Danio_rerio
ENSPPAG00000032109	-	93	78.689	ENSDARG00000101947	ptbp2a	99	78.689	Danio_rerio
ENSPPAG00000032109	-	82	30.952	FBgn0003435	sm	64	30.952	Drosophila_melanogaster
ENSPPAG00000032109	-	95	77.128	ENSEBUG00000001730	ptbp1a	61	77.128	Eptatretus_burgeri
ENSPPAG00000032109	-	62	30.400	ENSEBUG00000008335	-	62	30.400	Eptatretus_burgeri
ENSPPAG00000032109	-	80	94.702	ENSEASG00005021535	-	100	94.702	Equus_asinus_asinus
ENSPPAG00000032109	-	100	97.462	ENSFCAG00000001219	PTBP1	100	97.462	Felis_catus
ENSPPAG00000032109	-	97	74.054	ENSGACG00000015446	ptbp3	65	74.595	Gasterosteus_aculeatus
ENSPPAG00000032109	-	94	77.528	ENSGGOG00000026783	-	92	73.077	Gorilla_gorilla
ENSPPAG00000032109	-	100	90.576	ENSGGOG00000005090	-	100	90.576	Gorilla_gorilla
ENSPPAG00000032109	-	80	82.119	ENSHBUG00000000040	-	100	82.119	Haplochromis_burtoni
ENSPPAG00000032109	-	75	99.291	ENSHGLG00100004890	-	100	99.291	Heterocephalus_glaber_male
ENSPPAG00000032109	-	100	72.081	ENSHCOG00000015622	-	87	75.132	Hippocampus_comes
ENSPPAG00000032109	-	99	74.866	ENSHCOG00000013349	ptbp2a	77	79.459	Hippocampus_comes
ENSPPAG00000032109	-	100	100.000	ENSMFAG00000038325	-	100	100.000	Macaca_fascicularis
ENSPPAG00000032109	-	100	100.000	ENSMMUG00000016450	-	100	100.000	Macaca_mulatta
ENSPPAG00000032109	-	100	100.000	ENSMNEG00000028851	PTBP1	100	100.000	Macaca_nemestrina
ENSPPAG00000032109	-	98	100.000	ENSMLEG00000013865	PTBP1	100	100.000	Mandrillus_leucophaeus
ENSPPAG00000032109	-	100	98.477	ENSMICG00000007131	PTBP1	100	98.477	Microcebus_murinus
ENSPPAG00000032109	-	93	76.404	ENSMALG00000013144	ptbp3	95	76.243	Monopterus_albus
ENSPPAG00000032109	-	100	72.632	ENSNBRG00000001492	-	84	75.661	Neolamprologus_brichardi
ENSPPAG00000032109	-	98	100.000	ENSNLEG00000000864	PTBP1	100	100.000	Nomascus_leucogenys
ENSPPAG00000032109	-	93	96.739	ENSOPRG00000000964	PTBP1	52	96.739	Ochotona_princeps
ENSPPAG00000032109	-	59	34.211	ENSODEG00000018742	-	55	34.211	Octodon_degus
ENSPPAG00000032109	-	94	83.616	ENSOANG00000008979	-	99	83.333	Ornithorhynchus_anatinus
ENSPPAG00000032109	-	90	31.053	ENSOANG00000013257	-	80	31.053	Ornithorhynchus_anatinus
ENSPPAG00000032109	-	88	76.506	ENSOMEG00000009759	ptbp2a	100	76.506	Oryzias_melastigma
ENSPPAG00000032109	-	100	96.954	ENSPPRG00000006787	PTBP1	100	96.954	Panthera_pardus
ENSPPAG00000032109	-	100	100.000	ENSPTRG00000010165	PTBP1	100	100.000	Pan_troglodytes
ENSPPAG00000032109	-	100	100.000	ENSPANG00000007281	PTBP1	100	100.000	Papio_anubis
ENSPPAG00000032109	-	94	82.703	ENSPMGG00000020540	-	100	80.978	Periophthalmus_magnuspinnatus
ENSPPAG00000032109	-	76	62.937	ENSPMAG00000007617	-	88	62.937	Petromyzon_marinus
ENSPPAG00000032109	-	75	82.270	ENSPREG00000000963	-	100	82.270	Poecilia_reticulata
ENSPPAG00000032109	-	100	98.477	ENSPCOG00000015093	PTBP1	100	98.477	Propithecus_coquereli
ENSPPAG00000032109	-	90	73.684	ENSPNYG00000005126	-	98	70.879	Pundamilia_nyererei
ENSPPAG00000032109	-	83	30.000	ENSRNOG00000020235	Hnrnpl	69	30.000	Rattus_norvegicus
ENSPPAG00000032109	-	100	100.000	ENSRBIG00000044228	PTBP1	100	100.000	Rhinopithecus_bieti
ENSPPAG00000032109	-	98	86.598	ENSRBIG00000007193	-	98	86.598	Rhinopithecus_bieti
ENSPPAG00000032109	-	100	76.142	ENSRBIG00000026293	-	100	76.142	Rhinopithecus_bieti
ENSPPAG00000032109	-	100	77.665	ENSRROG00000044920	-	100	77.665	Rhinopithecus_roxellana
ENSPPAG00000032109	-	100	100.000	ENSRROG00000016534	PTBP1	100	100.000	Rhinopithecus_roxellana
ENSPPAG00000032109	-	98	75.258	ENSRROG00000021572	-	98	75.258	Rhinopithecus_roxellana
ENSPPAG00000032109	-	98	99.485	ENSSBOG00000034376	-	100	99.485	Saimiri_boliviensis_boliviensis
ENSPPAG00000032109	-	61	73.504	ENSSLDG00000009104	-	90	73.504	Seriola_lalandi_dorsalis
ENSPPAG00000032109	-	75	64.583	ENSSPAG00000008968	-	84	64.583	Stegastes_partitus
ENSPPAG00000032109	-	80	78.808	ENSTRUG00000000761	ptbp2a	100	78.808	Takifugu_rubripes
ENSPPAG00000032109	-	75	81.560	ENSUAMG00000011687	-	100	81.560	Ursus_americanus
ENSPPAG00000032109	-	77	94.483	ENSUMAG00000005396	-	99	94.483	Ursus_maritimus
ENSPPAG00000032109	-	89	33.333	ENSXETG00000033350	HNRNPLL	68	33.333	Xenopus_tropicalis
ENSPPAG00000032109	-	94	72.973	ENSXCOG00000007998	ptbp2b	96	71.579	Xiphophorus_couchianus