EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000032886 (Gene tree)
Gene ID: 100976848
Gene Symbol: CHD3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 22472 bases
Position: chr17:7910644-7933115
Accession: 100976848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000019815	ResIII	PF04851.15	2.8e-08	1	1
ENSPPAP00000019804	ResIII	PF04851.15	2.8e-08	1	1
ENSPPAP00000019785	ResIII	PF04851.15	2.9e-08	1	1
ENSPPAP00000019799	ResIII	PF04851.15	3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000042592	CHD3-204	5502	-	ENSPPAP00000019815	1833 (aa)	-	A0A2R9AVK1
ENSPPAT00000042576	CHD3-202	5991	-	ENSPPAP00000019799	1996 (aa)	-	A0A2R9AXN6
ENSPPAT00000042562	CHD3-201	6039	XM_008962425	ENSPPAP00000019785	2012 (aa)	XP_008960673	A0A2R9AVH2
ENSPPAT00000042581	CHD3-203	5937	-	ENSPPAP00000019804	1978 (aa)	-	A0A2R9AXP0

Gene Model

Click here to download ENSPPAG00000032886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000032886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000032886	CHD3	95	68.235	ENSPPAG00000029007	-	95	68.371
ENSPPAG00000032886	CHD3	98	66.070	ENSPPAG00000034048	CHD5	99	67.050

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000032886	CHD3	100	97.536	ENSG00000170004	CHD3	100	97.536	Homo_sapiens
ENSPPAG00000032886	CHD3	85	80.208	ENSAPOG00000005614	chd3	94	80.208	Acanthochromis_polyacanthus
ENSPPAG00000032886	CHD3	74	93.037	ENSAMEG00000003025	-	100	94.616	Ailuropoda_melanoleuca
ENSPPAG00000032886	CHD3	81	83.516	ENSACIG00000019671	chd3	99	83.516	Amphilophus_citrinellus
ENSPPAG00000032886	CHD3	91	79.125	ENSAOCG00000023784	chd3	97	81.250	Amphiprion_ocellaris
ENSPPAG00000032886	CHD3	91	78.788	ENSAPEG00000006341	chd3	96	71.928	Amphiprion_percula
ENSPPAG00000032886	CHD3	99	71.532	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSPPAG00000032886	CHD3	99	82.409	ENSACAG00000004276	CHD3	96	82.803	Anolis_carolinensis
ENSPPAG00000032886	CHD3	99	95.912	ENSANAG00000034323	CHD3	99	97.008	Aotus_nancymaae
ENSPPAG00000032886	CHD3	94	77.370	ENSACLG00000009222	chd3	99	73.013	Astatotilapia_calliptera
ENSPPAG00000032886	CHD3	98	96.048	ENSBTAG00000014377	CHD3	97	95.998	Bos_taurus
ENSPPAG00000032886	CHD3	99	97.088	ENSCJAG00000014766	CHD3	99	97.088	Callithrix_jacchus
ENSPPAG00000032886	CHD3	100	95.665	ENSCAFG00000016859	CHD3	100	95.665	Canis_familiaris
ENSPPAG00000032886	CHD3	99	94.839	ENSCAFG00020007422	CHD3	100	96.026	Canis_lupus_dingo
ENSPPAG00000032886	CHD3	99	96.315	ENSCHIG00000016737	CHD3	100	96.315	Capra_hircus
ENSPPAG00000032886	CHD3	100	96.643	ENSTSYG00000035658	CHD3	100	96.643	Carlito_syrichta
ENSPPAG00000032886	CHD3	99	92.631	ENSCAPG00000014864	CHD3	99	92.631	Cavia_aperea
ENSPPAG00000032886	CHD3	99	95.104	ENSCPOG00000022653	CHD3	99	95.104	Cavia_porcellus
ENSPPAG00000032886	CHD3	100	96.895	ENSCCAG00000034792	CHD3	100	96.895	Cebus_capucinus
ENSPPAG00000032886	CHD3	100	97.293	ENSCATG00000041717	CHD3	100	97.293	Cercocebus_atys
ENSPPAG00000032886	CHD3	98	96.192	ENSCLAG00000010523	CHD3	100	96.192	Chinchilla_lanigera
ENSPPAG00000032886	CHD3	98	97.047	ENSCSAG00000011122	CHD3	100	97.047	Chlorocebus_sabaeus
ENSPPAG00000032886	CHD3	92	83.324	ENSCPBG00000011966	CHD3	99	85.554	Chrysemys_picta_bellii
ENSPPAG00000032886	CHD3	100	98.530	ENSCANG00000037641	CHD3	100	98.530	Colobus_angolensis_palliatus
ENSPPAG00000032886	CHD3	98	95.262	ENSCGRG00001011306	Chd3	100	95.262	Cricetulus_griseus_chok1gshd
ENSPPAG00000032886	CHD3	93	97.794	ENSCGRG00000007878	Chd3	99	97.794	Cricetulus_griseus_crigri
ENSPPAG00000032886	CHD3	92	78.457	ENSCSEG00000004489	chd3	99	74.481	Cynoglossus_semilaevis
ENSPPAG00000032886	CHD3	89	81.349	ENSCVAG00000007293	chd3	95	82.258	Cyprinodon_variegatus
ENSPPAG00000032886	CHD3	98	73.479	ENSDARG00000021405	chd3	99	74.790	Danio_rerio
ENSPPAG00000032886	CHD3	98	81.705	ENSDNOG00000047846	CHD3	98	81.555	Dasypus_novemcinctus
ENSPPAG00000032886	CHD3	98	95.665	ENSDORG00000010713	Chd3	100	95.665	Dipodomys_ordii
ENSPPAG00000032886	CHD3	98	89.615	ENSETEG00000017733	CHD3	100	89.826	Echinops_telfairi
ENSPPAG00000032886	CHD3	58	73.393	ENSEBUG00000008310	chd3	99	68.342	Eptatretus_burgeri
ENSPPAG00000032886	CHD3	99	95.108	ENSEASG00005019360	CHD3	100	96.294	Equus_asinus_asinus
ENSPPAG00000032886	CHD3	99	95.161	ENSECAG00000010051	CHD3	100	96.348	Equus_caballus
ENSPPAG00000032886	CHD3	92	98.305	ENSEEUG00000015205	CHD3	93	98.305	Erinaceus_europaeus
ENSPPAG00000032886	CHD3	83	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSPPAG00000032886	CHD3	98	95.996	ENSFCAG00000009629	CHD3	96	95.996	Felis_catus
ENSPPAG00000032886	CHD3	99	94.731	ENSFDAG00000008220	CHD3	99	93.340	Fukomys_damarensis
ENSPPAG00000032886	CHD3	89	77.579	ENSGMOG00000013599	chd3	91	78.175	Gadus_morhua
ENSPPAG00000032886	CHD3	58	76.781	ENSGAFG00000004055	chd3	99	76.239	Gambusia_affinis
ENSPPAG00000032886	CHD3	99	69.687	ENSGACG00000019275	chd3	100	69.756	Gasterosteus_aculeatus
ENSPPAG00000032886	CHD3	81	81.878	ENSGAGG00000013164	CHD3	98	84.693	Gopherus_agassizii
ENSPPAG00000032886	CHD3	100	98.857	ENSGGOG00000013496	CHD3	100	98.857	Gorilla_gorilla
ENSPPAG00000032886	CHD3	99	95.217	ENSHGLG00000012017	CHD3	100	95.217	Heterocephalus_glaber_female
ENSPPAG00000032886	CHD3	88	90.119	ENSHGLG00100013902	CHD3	99	89.189	Heterocephalus_glaber_male
ENSPPAG00000032886	CHD3	96	71.720	ENSHCOG00000010170	chd3	96	72.093	Hippocampus_comes
ENSPPAG00000032886	CHD3	92	75.390	ENSIPUG00000003271	chd3	96	78.720	Ictalurus_punctatus
ENSPPAG00000032886	CHD3	99	96.347	ENSSTOG00000025907	CHD3	100	96.647	Ictidomys_tridecemlineatus
ENSPPAG00000032886	CHD3	100	94.433	ENSJJAG00000017633	Chd3	100	95.413	Jaculus_jaculus
ENSPPAG00000032886	CHD3	86	92.574	ENSKMAG00000019292	chd3	97	74.098	Kryptolebias_marmoratus
ENSPPAG00000032886	CHD3	89	82.800	ENSLBEG00000028485	chd3	92	81.890	Labrus_bergylta
ENSPPAG00000032886	CHD3	98	72.458	ENSLACG00000008031	CHD3	99	72.570	Latimeria_chalumnae
ENSPPAG00000032886	CHD3	99	75.157	ENSLOCG00000013965	chd3	97	75.353	Lepisosteus_oculatus
ENSPPAG00000032886	CHD3	94	92.461	ENSLAFG00000000572	CHD3	100	92.461	Loxodonta_africana
ENSPPAG00000032886	CHD3	100	97.655	ENSMFAG00000020113	CHD3	100	97.655	Macaca_fascicularis
ENSPPAG00000032886	CHD3	100	95.693	ENSMMUG00000022221	CHD3	100	95.693	Macaca_mulatta
ENSPPAG00000032886	CHD3	100	97.243	ENSMNEG00000001728	CHD3	100	97.243	Macaca_nemestrina
ENSPPAG00000032886	CHD3	100	97.293	ENSMLEG00000032249	CHD3	100	97.293	Mandrillus_leucophaeus
ENSPPAG00000032886	CHD3	92	72.372	ENSMAMG00000000564	chd3	95	80.729	Mastacembelus_armatus
ENSPPAG00000032886	CHD3	99	94.734	ENSMAUG00000013873	Chd3	99	92.097	Mesocricetus_auratus
ENSPPAG00000032886	CHD3	98	96.697	ENSMICG00000008741	CHD3	100	93.366	Microcebus_murinus
ENSPPAG00000032886	CHD3	98	95.403	ENSMOCG00000004848	Chd3	100	95.403	Microtus_ochrogaster
ENSPPAG00000032886	CHD3	98	72.414	ENSMMOG00000012699	chd3	99	72.283	Mola_mola
ENSPPAG00000032886	CHD3	99	89.361	ENSMODG00000007509	CHD3	100	92.127	Monodelphis_domestica
ENSPPAG00000032886	CHD3	98	95.069	MGP_CAROLIEiJ_G0016564	Chd3	100	95.091	Mus_caroli
ENSPPAG00000032886	CHD3	98	95.170	ENSMUSG00000018474	Chd3	99	95.196	Mus_musculus
ENSPPAG00000032886	CHD3	98	95.270	MGP_PahariEiJ_G0017695	Chd3	100	95.298	Mus_pahari
ENSPPAG00000032886	CHD3	98	95.170	MGP_SPRETEiJ_G0017400	Chd3	100	95.196	Mus_spretus
ENSPPAG00000032886	CHD3	93	94.320	ENSMPUG00000008861	CHD3	100	95.582	Mustela_putorius_furo
ENSPPAG00000032886	CHD3	100	94.978	ENSMLUG00000014643	-	100	94.978	Myotis_lucifugus
ENSPPAG00000032886	CHD3	99	95.035	ENSNGAG00000000773	Chd3	99	95.035	Nannospalax_galili
ENSPPAG00000032886	CHD3	92	72.506	ENSNBRG00000000636	chd3	98	74.244	Neolamprologus_brichardi
ENSPPAG00000032886	CHD3	99	93.741	ENSNLEG00000009770	CHD3	100	94.629	Nomascus_leucogenys
ENSPPAG00000032886	CHD3	85	90.151	ENSMEUG00000005852	CHD3	87	90.151	Notamacropus_eugenii
ENSPPAG00000032886	CHD3	99	93.168	ENSOPRG00000011069	CHD3	100	94.477	Ochotona_princeps
ENSPPAG00000032886	CHD3	99	95.344	ENSODEG00000017785	CHD3	100	95.344	Octodon_degus
ENSPPAG00000032886	CHD3	98	73.247	ENSONIG00000009292	chd3	100	73.286	Oreochromis_niloticus
ENSPPAG00000032886	CHD3	98	91.625	ENSOCUG00000029299	CHD3	100	91.529	Oryctolagus_cuniculus
ENSPPAG00000032886	CHD3	84	68.461	ENSORLG00000007107	chd3	93	70.121	Oryzias_latipes
ENSPPAG00000032886	CHD3	56	75.121	ENSORLG00020008387	chd3	95	73.433	Oryzias_latipes_hni
ENSPPAG00000032886	CHD3	76	76.772	ENSOMEG00000013691	chd3	99	76.484	Oryzias_melastigma
ENSPPAG00000032886	CHD3	98	96.148	ENSOGAG00000003216	CHD3	100	96.148	Otolemur_garnettii
ENSPPAG00000032886	CHD3	99	93.553	ENSOARG00000017855	CHD3	99	93.553	Ovis_aries
ENSPPAG00000032886	CHD3	99	95.515	ENSPPRG00000000626	CHD3	99	95.515	Panthera_pardus
ENSPPAG00000032886	CHD3	100	99.075	ENSPTRG00000008714	CHD3	100	99.075	Pan_troglodytes
ENSPPAG00000032886	CHD3	100	97.550	ENSPANG00000023938	CHD3	100	97.550	Papio_anubis
ENSPPAG00000032886	CHD3	97	76.684	ENSPKIG00000006305	chd3	99	77.128	Paramormyrops_kingsleyae
ENSPPAG00000032886	CHD3	59	90.219	ENSPSIG00000010177	CHD3	98	90.494	Pelodiscus_sinensis
ENSPPAG00000032886	CHD3	99	94.732	ENSPEMG00000014262	Chd3	100	94.732	Peromyscus_maniculatus_bairdii
ENSPPAG00000032886	CHD3	99	90.982	ENSPCIG00000005442	CHD3	98	95.238	Phascolarctos_cinereus
ENSPPAG00000032886	CHD3	98	71.610	ENSPFOG00000012464	chd3	87	78.878	Poecilia_formosa
ENSPPAG00000032886	CHD3	89	82.869	ENSPLAG00000002887	chd3	96	82.869	Poecilia_latipinna
ENSPPAG00000032886	CHD3	53	80.792	ENSPMEG00000016725	chd3	94	72.900	Poecilia_mexicana
ENSPPAG00000032886	CHD3	91	82.310	ENSPREG00000011044	chd3	99	75.982	Poecilia_reticulata
ENSPPAG00000032886	CHD3	100	92.607	ENSPPYG00000007940	CHD3	100	92.607	Pongo_abelii
ENSPPAG00000032886	CHD3	96	96.000	ENSPCAG00000004350	CHD3	96	96.269	Procavia_capensis
ENSPPAG00000032886	CHD3	100	95.963	ENSPCOG00000020952	CHD3	100	95.963	Propithecus_coquereli
ENSPPAG00000032886	CHD3	86	98.031	ENSPVAG00000016344	CHD3	87	94.190	Pteropus_vampyrus
ENSPPAG00000032886	CHD3	96	76.354	ENSPNAG00000020393	chd3	98	79.383	Pygocentrus_nattereri
ENSPPAG00000032886	CHD3	99	92.915	ENSRNOG00000009722	Chd3	100	94.102	Rattus_norvegicus
ENSPPAG00000032886	CHD3	100	97.133	ENSRBIG00000033562	CHD3	100	97.133	Rhinopithecus_bieti
ENSPPAG00000032886	CHD3	100	98.663	ENSRROG00000029554	CHD3	100	98.663	Rhinopithecus_roxellana
ENSPPAG00000032886	CHD3	100	96.994	ENSSBOG00000020719	CHD3	100	96.994	Saimiri_boliviensis_boliviensis
ENSPPAG00000032886	CHD3	98	92.532	ENSSHAG00000014412	CHD3	100	92.532	Sarcophilus_harrisii
ENSPPAG00000032886	CHD3	94	77.786	ENSSFOG00015023123	chd3	98	73.124	Scleropages_formosus
ENSPPAG00000032886	CHD3	85	91.304	ENSSMAG00000006451	chd3	95	80.208	Scophthalmus_maximus
ENSPPAG00000032886	CHD3	54	74.625	ENSSDUG00000005792	chd3	95	73.168	Seriola_dumerili
ENSPPAG00000032886	CHD3	91	78.788	ENSSPAG00000013694	chd3	98	81.053	Stegastes_partitus
ENSPPAG00000032886	CHD3	99	96.052	ENSSSCG00000021363	CHD3	100	95.921	Sus_scrofa
ENSPPAG00000032886	CHD3	75	74.478	ENSTRUG00000014990	chd3	89	74.351	Takifugu_rubripes
ENSPPAG00000032886	CHD3	99	71.054	ENSTNIG00000012998	chd3	99	71.557	Tetraodon_nigroviridis
ENSPPAG00000032886	CHD3	67	97.391	ENSTBEG00000011454	-	71	97.608	Tupaia_belangeri
ENSPPAG00000032886	CHD3	99	100.000	ENSTTRG00000010295	CHD3	97	99.383	Tursiops_truncatus
ENSPPAG00000032886	CHD3	99	93.626	ENSUAMG00000005475	CHD3	99	94.855	Ursus_americanus
ENSPPAG00000032886	CHD3	60	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSPPAG00000032886	CHD3	99	94.839	ENSVVUG00000028011	CHD3	99	95.960	Vulpes_vulpes
ENSPPAG00000032886	CHD3	99	70.741	ENSXETG00000012991	chd3	92	71.872	Xenopus_tropicalis
ENSPPAG00000032886	CHD3	50	91.429	ENSXCOG00000000809	chd3	96	82.638	Xiphophorus_couchianus
ENSPPAG00000032886	CHD3	85	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus