EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000032998 (Gene tree)
Gene ID: 100973637
Gene Symbol: LIG4
Alias: -
Full Name: DNA ligase 4
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 2736 bases
Position: chr13:108475820-108478555
Accession: 100973637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000019573	RNA_ligase	PF09414.10	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000042341	LIG4-201	2736	XM_003832075	ENSPPAP00000019573	911 (aa)	XP_003832123	A0A2R9AQY6

Gene Model

Click here to download ENSPPAG00000032998's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000032998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000032998	LIG4	100	99.341	ENSG00000174405	LIG4	100	99.341	Homo_sapiens
ENSPPAG00000032998	LIG4	99	65.714	ENSAPOG00000000866	lig4	99	65.934	Acanthochromis_polyacanthus
ENSPPAG00000032998	LIG4	100	88.913	ENSAMEG00000019685	LIG4	99	88.913	Ailuropoda_melanoleuca
ENSPPAG00000032998	LIG4	99	66.557	ENSACIG00000018309	lig4	99	66.777	Amphilophus_citrinellus
ENSPPAG00000032998	LIG4	99	65.714	ENSAOCG00000011768	lig4	99	65.934	Amphiprion_ocellaris
ENSPPAG00000032998	LIG4	99	65.824	ENSAPEG00000017815	lig4	99	66.044	Amphiprion_percula
ENSPPAG00000032998	LIG4	99	65.859	ENSATEG00000005583	lig4	99	65.969	Anabas_testudineus
ENSPPAG00000032998	LIG4	97	75.568	ENSAPLG00000001673	LIG4	99	75.568	Anas_platyrhynchos
ENSPPAG00000032998	LIG4	99	76.523	ENSACAG00000014566	LIG4	99	76.523	Anolis_carolinensis
ENSPPAG00000032998	LIG4	100	95.499	ENSANAG00000012446	LIG4	100	95.499	Aotus_nancymaae
ENSPPAG00000032998	LIG4	99	65.787	ENSACLG00000027051	lig4	99	65.787	Astatotilapia_calliptera
ENSPPAG00000032998	LIG4	99	64.551	ENSAMXG00000008192	lig4	94	64.551	Astyanax_mexicanus
ENSPPAG00000032998	LIG4	100	88.804	ENSBTAG00000015868	LIG4	100	88.804	Bos_taurus
ENSPPAG00000032998	LIG4	100	94.621	ENSCJAG00000014689	LIG4	100	94.621	Callithrix_jacchus
ENSPPAG00000032998	LIG4	100	90.560	ENSCAFG00000006031	LIG4	100	90.560	Canis_familiaris
ENSPPAG00000032998	LIG4	100	90.560	ENSCAFG00020021230	LIG4	100	90.560	Canis_lupus_dingo
ENSPPAG00000032998	LIG4	100	88.584	ENSCHIG00000001019	LIG4	100	88.584	Capra_hircus
ENSPPAG00000032998	LIG4	99	88.151	ENSCAPG00000006284	LIG4	99	88.151	Cavia_aperea
ENSPPAG00000032998	LIG4	100	88.145	ENSCPOG00000014266	LIG4	100	88.145	Cavia_porcellus
ENSPPAG00000032998	LIG4	100	95.060	ENSCCAG00000019971	LIG4	100	95.060	Cebus_capucinus
ENSPPAG00000032998	LIG4	100	96.707	ENSCATG00000021075	LIG4	100	96.707	Cercocebus_atys
ENSPPAG00000032998	LIG4	100	89.243	ENSCLAG00000003376	LIG4	100	89.243	Chinchilla_lanigera
ENSPPAG00000032998	LIG4	100	96.817	ENSCSAG00000000211	LIG4	100	96.817	Chlorocebus_sabaeus
ENSPPAG00000032998	LIG4	99	79.691	ENSCPBG00000023291	LIG4	100	79.085	Chrysemys_picta_bellii
ENSPPAG00000032998	LIG4	68	44.992	ENSCING00000009536	-	95	44.992	Ciona_intestinalis
ENSPPAG00000032998	LIG4	83	45.204	ENSCSAVG00000010336	-	98	45.204	Ciona_savignyi
ENSPPAG00000032998	LIG4	100	96.817	ENSCANG00000005805	LIG4	100	96.817	Colobus_angolensis_palliatus
ENSPPAG00000032998	LIG4	100	86.732	ENSCGRG00001012072	Lig4	100	86.732	Cricetulus_griseus_chok1gshd
ENSPPAG00000032998	LIG4	100	86.732	ENSCGRG00000013417	Lig4	100	86.732	Cricetulus_griseus_crigri
ENSPPAG00000032998	LIG4	97	66.704	ENSCSEG00000013905	lig4	95	66.704	Cynoglossus_semilaevis
ENSPPAG00000032998	LIG4	99	66.334	ENSCVAG00000007896	lig4	99	66.334	Cyprinodon_variegatus
ENSPPAG00000032998	LIG4	99	64.341	ENSDARG00000060620	lig4	98	64.341	Danio_rerio
ENSPPAG00000032998	LIG4	100	90.132	ENSDNOG00000000513	LIG4	100	90.132	Dasypus_novemcinctus
ENSPPAG00000032998	LIG4	100	88.694	ENSDORG00000027303	Lig4	100	88.694	Dipodomys_ordii
ENSPPAG00000032998	LIG4	90	30.994	FBgn0030506	Lig4	91	30.994	Drosophila_melanogaster
ENSPPAG00000032998	LIG4	99	84.701	ENSETEG00000015563	LIG4	100	84.812	Echinops_telfairi
ENSPPAG00000032998	LIG4	99	43.816	ENSEBUG00000014243	lig4	99	43.816	Eptatretus_burgeri
ENSPPAG00000032998	LIG4	100	91.109	ENSEASG00005022073	LIG4	100	91.109	Equus_asinus_asinus
ENSPPAG00000032998	LIG4	100	90.670	ENSECAG00000003257	LIG4	100	90.670	Equus_caballus
ENSPPAG00000032998	LIG4	99	66.703	ENSELUG00000006787	lig4	99	66.814	Esox_lucius
ENSPPAG00000032998	LIG4	100	89.901	ENSFCAG00000031985	LIG4	100	89.901	Felis_catus
ENSPPAG00000032998	LIG4	89	76.138	ENSFALG00000004214	LIG4	98	76.138	Ficedula_albicollis
ENSPPAG00000032998	LIG4	100	89.243	ENSFDAG00000008973	LIG4	100	89.243	Fukomys_damarensis
ENSPPAG00000032998	LIG4	99	65.227	ENSFHEG00000007398	lig4	89	65.227	Fundulus_heteroclitus
ENSPPAG00000032998	LIG4	85	63.928	ENSGMOG00000012843	lig4	99	63.928	Gadus_morhua
ENSPPAG00000032998	LIG4	100	75.437	ENSGALG00000016854	LIG4	100	75.437	Gallus_gallus
ENSPPAG00000032998	LIG4	99	65.479	ENSGAFG00000019779	lig4	95	65.385	Gambusia_affinis
ENSPPAG00000032998	LIG4	99	63.566	ENSGACG00000014135	lig4	99	63.566	Gasterosteus_aculeatus
ENSPPAG00000032998	LIG4	100	99.232	ENSGGOG00000027771	LIG4	100	99.232	Gorilla_gorilla
ENSPPAG00000032998	LIG4	99	65.567	ENSHBUG00000006245	lig4	99	65.567	Haplochromis_burtoni
ENSPPAG00000032998	LIG4	100	89.352	ENSHGLG00000000718	LIG4	100	89.352	Heterocephalus_glaber_female
ENSPPAG00000032998	LIG4	100	89.352	ENSHGLG00100003265	LIG4	100	89.352	Heterocephalus_glaber_male
ENSPPAG00000032998	LIG4	99	64.615	ENSHCOG00000012010	lig4	99	64.615	Hippocampus_comes
ENSPPAG00000032998	LIG4	99	64.984	ENSIPUG00000013748	lig4	99	64.984	Ictalurus_punctatus
ENSPPAG00000032998	LIG4	100	90.231	ENSSTOG00000024303	LIG4	100	90.231	Ictidomys_tridecemlineatus
ENSPPAG00000032998	LIG4	100	87.377	ENSJJAG00000006750	Lig4	100	87.377	Jaculus_jaculus
ENSPPAG00000032998	LIG4	99	65.227	ENSKMAG00000001149	lig4	99	65.227	Kryptolebias_marmoratus
ENSPPAG00000032998	LIG4	91	66.106	ENSLBEG00000014578	lig4	100	66.346	Labrus_bergylta
ENSPPAG00000032998	LIG4	99	72.456	ENSLACG00000003282	LIG4	99	72.456	Latimeria_chalumnae
ENSPPAG00000032998	LIG4	99	70.724	ENSLOCG00000008901	lig4	98	70.724	Lepisosteus_oculatus
ENSPPAG00000032998	LIG4	100	88.061	ENSLAFG00000031152	LIG4	100	88.061	Loxodonta_africana
ENSPPAG00000032998	LIG4	100	96.926	ENSMFAG00000037235	LIG4	100	96.926	Macaca_fascicularis
ENSPPAG00000032998	LIG4	100	96.926	ENSMMUG00000008874	LIG4	100	96.926	Macaca_mulatta
ENSPPAG00000032998	LIG4	100	96.926	ENSMNEG00000023575	LIG4	100	96.926	Macaca_nemestrina
ENSPPAG00000032998	LIG4	100	96.597	ENSMLEG00000026720	LIG4	100	96.597	Mandrillus_leucophaeus
ENSPPAG00000032998	LIG4	99	65.934	ENSMAMG00000008472	lig4	99	66.154	Mastacembelus_armatus
ENSPPAG00000032998	LIG4	99	65.787	ENSMZEG00005001855	lig4	99	65.787	Maylandia_zebra
ENSPPAG00000032998	LIG4	99	76.070	ENSMGAG00000015532	LIG4	99	76.070	Meleagris_gallopavo
ENSPPAG00000032998	LIG4	100	84.523	ENSMOCG00000019000	Lig4	100	84.523	Microtus_ochrogaster
ENSPPAG00000032998	LIG4	99	65.449	ENSMMOG00000004390	lig4	99	65.449	Mola_mola
ENSPPAG00000032998	LIG4	100	84.193	ENSMODG00000025064	LIG4	100	84.649	Monodelphis_domestica
ENSPPAG00000032998	LIG4	99	65.891	ENSMALG00000008555	lig4	99	65.891	Monopterus_albus
ENSPPAG00000032998	LIG4	100	87.047	MGP_CAROLIEiJ_G0030809	Lig4	100	87.047	Mus_caroli
ENSPPAG00000032998	LIG4	100	86.828	ENSMUSG00000049717	Lig4	100	86.828	Mus_musculus
ENSPPAG00000032998	LIG4	100	86.828	MGP_PahariEiJ_G0021270	Lig4	100	86.828	Mus_pahari
ENSPPAG00000032998	LIG4	100	86.828	MGP_SPRETEiJ_G0031917	Lig4	100	86.828	Mus_spretus
ENSPPAG00000032998	LIG4	100	88.584	ENSMPUG00000018675	LIG4	100	88.584	Mustela_putorius_furo
ENSPPAG00000032998	LIG4	100	90.670	ENSMLUG00000001267	LIG4	100	90.670	Myotis_lucifugus
ENSPPAG00000032998	LIG4	100	87.047	ENSNGAG00000013258	Lig4	100	87.047	Nannospalax_galili
ENSPPAG00000032998	LIG4	99	66.007	ENSNBRG00000021252	lig4	99	66.007	Neolamprologus_brichardi
ENSPPAG00000032998	LIG4	100	97.256	ENSNLEG00000007888	LIG4	100	97.256	Nomascus_leucogenys
ENSPPAG00000032998	LIG4	100	88.035	ENSOPRG00000005765	LIG4	100	88.035	Ochotona_princeps
ENSPPAG00000032998	LIG4	100	87.267	ENSODEG00000019683	LIG4	100	87.267	Octodon_degus
ENSPPAG00000032998	LIG4	99	65.677	ENSONIG00000011969	lig4	98	65.897	Oreochromis_niloticus
ENSPPAG00000032998	LIG4	100	90.999	ENSOCUG00000015734	LIG4	100	90.999	Oryctolagus_cuniculus
ENSPPAG00000032998	LIG4	99	64.615	ENSORLG00000004041	lig4	99	64.615	Oryzias_latipes
ENSPPAG00000032998	LIG4	99	64.945	ENSORLG00020019607	lig4	99	64.945	Oryzias_latipes_hni
ENSPPAG00000032998	LIG4	99	64.505	ENSORLG00015017754	lig4	99	64.505	Oryzias_latipes_hsok
ENSPPAG00000032998	LIG4	74	70.266	ENSOMEG00000003459	lig4	98	70.266	Oryzias_melastigma
ENSPPAG00000032998	LIG4	100	91.447	ENSOGAG00000032120	LIG4	99	91.447	Otolemur_garnettii
ENSPPAG00000032998	LIG4	82	90.470	ENSOARG00000005590	LIG4	98	90.470	Ovis_aries
ENSPPAG00000032998	LIG4	100	90.121	ENSPPRG00000017804	LIG4	100	90.121	Panthera_pardus
ENSPPAG00000032998	LIG4	100	90.011	ENSPTIG00000010051	LIG4	100	90.011	Panthera_tigris_altaica
ENSPPAG00000032998	LIG4	100	99.890	ENSPTRG00000006025	LIG4	100	99.890	Pan_troglodytes
ENSPPAG00000032998	LIG4	100	96.817	ENSPANG00000007562	LIG4	100	96.817	Papio_anubis
ENSPPAG00000032998	LIG4	99	66.740	ENSPKIG00000011645	lig4	98	66.740	Paramormyrops_kingsleyae
ENSPPAG00000032998	LIG4	99	78.791	ENSPSIG00000001504	LIG4	99	78.791	Pelodiscus_sinensis
ENSPPAG00000032998	LIG4	99	63.556	ENSPMGG00000013486	lig4	99	63.117	Periophthalmus_magnuspinnatus
ENSPPAG00000032998	LIG4	100	86.732	ENSPEMG00000000076	Lig4	100	86.732	Peromyscus_maniculatus_bairdii
ENSPPAG00000032998	LIG4	100	84.430	ENSPCIG00000021882	LIG4	100	84.430	Phascolarctos_cinereus
ENSPPAG00000032998	LIG4	99	65.628	ENSPFOG00000000797	lig4	99	65.385	Poecilia_formosa
ENSPPAG00000032998	LIG4	99	65.517	ENSPLAG00000001196	lig4	99	65.275	Poecilia_latipinna
ENSPPAG00000032998	LIG4	99	65.628	ENSPMEG00000021353	lig4	99	65.495	Poecilia_mexicana
ENSPPAG00000032998	LIG4	99	65.406	ENSPREG00000007323	lig4	99	65.055	Poecilia_reticulata
ENSPPAG00000032998	LIG4	100	97.805	ENSPPYG00000005540	LIG4	100	97.805	Pongo_abelii
ENSPPAG00000032998	LIG4	100	90.450	ENSPVAG00000016403	LIG4	100	90.450	Pteropus_vampyrus
ENSPPAG00000032998	LIG4	99	65.677	ENSPNYG00000009660	lig4	99	65.677	Pundamilia_nyererei
ENSPPAG00000032998	LIG4	100	64.474	ENSPNAG00000028069	LIG4	100	64.474	Pygocentrus_nattereri
ENSPPAG00000032998	LIG4	100	64.474	ENSPNAG00000028056	lig4	100	64.474	Pygocentrus_nattereri
ENSPPAG00000032998	LIG4	100	85.950	ENSRNOG00000014605	Lig4	100	85.950	Rattus_norvegicus
ENSPPAG00000032998	LIG4	100	95.280	ENSRBIG00000039962	LIG4	100	95.280	Rhinopithecus_bieti
ENSPPAG00000032998	LIG4	100	96.268	ENSRROG00000006040	LIG4	100	96.268	Rhinopithecus_roxellana
ENSPPAG00000032998	LIG4	100	94.402	ENSSBOG00000019029	LIG4	100	94.402	Saimiri_boliviensis_boliviensis
ENSPPAG00000032998	LIG4	100	80.681	ENSSHAG00000009525	LIG4	100	81.250	Sarcophilus_harrisii
ENSPPAG00000032998	LIG4	100	65.611	ENSSFOG00015012835	lig4	100	65.611	Scleropages_formosus
ENSPPAG00000032998	LIG4	99	63.787	ENSSMAG00000011267	lig4	99	63.787	Scophthalmus_maximus
ENSPPAG00000032998	LIG4	99	66.962	ENSSDUG00000010343	lig4	98	66.962	Seriola_dumerili
ENSPPAG00000032998	LIG4	99	65.055	ENSSLDG00000003239	lig4	99	65.055	Seriola_lalandi_dorsalis
ENSPPAG00000032998	LIG4	100	83.370	ENSSARG00000006573	LIG4	100	83.370	Sorex_araneus
ENSPPAG00000032998	LIG4	93	77.488	ENSSPUG00000002444	LIG4	100	77.488	Sphenodon_punctatus
ENSPPAG00000032998	LIG4	99	65.714	ENSSPAG00000001609	lig4	99	65.714	Stegastes_partitus
ENSPPAG00000032998	LIG4	100	88.364	ENSSSCG00000009540	LIG4	100	88.364	Sus_scrofa
ENSPPAG00000032998	LIG4	99	75.442	ENSTGUG00000010795	LIG4	99	75.442	Taeniopygia_guttata
ENSPPAG00000032998	LIG4	99	65.275	ENSTRUG00000009984	lig4	99	65.275	Takifugu_rubripes
ENSPPAG00000032998	LIG4	99	65.165	ENSTNIG00000010348	lig4	99	65.385	Tetraodon_nigroviridis
ENSPPAG00000032998	LIG4	100	90.999	ENSTBEG00000017741	LIG4	100	90.999	Tupaia_belangeri
ENSPPAG00000032998	LIG4	100	89.133	ENSTTRG00000012660	LIG4	100	89.133	Tursiops_truncatus
ENSPPAG00000032998	LIG4	100	88.804	ENSUAMG00000003773	LIG4	100	88.804	Ursus_americanus
ENSPPAG00000032998	LIG4	99	72.907	ENSXETG00000002654	lig4	99	72.907	Xenopus_tropicalis
ENSPPAG00000032998	LIG4	99	65.406	ENSXCOG00000017401	lig4	99	64.945	Xiphophorus_couchianus
ENSPPAG00000032998	LIG4	99	65.667	ENSXMAG00000015142	lig4	99	65.203	Xiphophorus_maculatus