EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000034012 (Gene tree)
Gene ID: 100994365
Gene Symbol: VARS
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 17346 bases
Position: chr6:32325931-32343276
Accession: 100994365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000021593	tRNA-synt_1g	PF09334.11	2.4e-10	1	1
ENSPPAP00000021593	Anticodon_1	PF08264.13	2.7e-32	1	1
ENSPPAP00000021593	tRNA-synt_1	PF00133.22	4.9e-201	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000044396	VARS-201	4036	XM_003831551	ENSPPAP00000021593	1264 (aa)	XP_003831599	A0A2R9AWC1

Gene Model

Click here to download ENSPPAG00000034012's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000034012's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000034012	VARS	81	50.435	ENSPPAG00000041141	VARS2	91	51.762

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000034012	VARS	100	99.604	ENSG00000204394	VARS	100	99.604	Homo_sapiens
ENSPPAG00000034012	VARS	98	64.635	ENSAPOG00000020691	vars	99	64.395	Acanthochromis_polyacanthus
ENSPPAG00000034012	VARS	98	64.635	ENSAPOG00000020921	vars	99	64.395	Acanthochromis_polyacanthus
ENSPPAG00000034012	VARS	100	95.257	ENSAMEG00000006417	VARS	100	95.257	Ailuropoda_melanoleuca
ENSPPAG00000034012	VARS	100	65.569	ENSACIG00000013752	vars	100	65.330	Amphilophus_citrinellus
ENSPPAG00000034012	VARS	100	64.546	ENSAOCG00000002447	vars	100	64.201	Amphiprion_ocellaris
ENSPPAG00000034012	VARS	100	64.546	ENSAPEG00000010638	vars	99	64.564	Amphiprion_percula
ENSPPAG00000034012	VARS	100	64.460	ENSATEG00000020219	vars	100	64.224	Anabas_testudineus
ENSPPAG00000034012	VARS	90	70.512	ENSACAG00000029133	-	99	70.165	Anolis_carolinensis
ENSPPAG00000034012	VARS	100	97.864	ENSANAG00000015453	VARS	100	97.864	Aotus_nancymaae
ENSPPAG00000034012	VARS	100	64.884	ENSACLG00000025699	vars	97	64.646	Astatotilapia_calliptera
ENSPPAG00000034012	VARS	94	65.805	ENSAMXG00000017716	vars	95	65.805	Astyanax_mexicanus
ENSPPAG00000034012	VARS	100	95.253	ENSBTAG00000005631	VARS	100	95.253	Bos_taurus
ENSPPAG00000034012	VARS	100	97.943	ENSCJAG00000002604	VARS	100	97.943	Callithrix_jacchus
ENSPPAG00000034012	VARS	100	94.620	ENSCAFG00000000636	VARS	100	94.620	Canis_familiaris
ENSPPAG00000034012	VARS	94	94.510	ENSCAFG00020020790	VARS	96	94.510	Canis_lupus_dingo
ENSPPAG00000034012	VARS	100	95.491	ENSCHIG00000011008	VARS	100	95.491	Capra_hircus
ENSPPAG00000034012	VARS	100	96.282	ENSTSYG00000001567	VARS	100	96.282	Carlito_syrichta
ENSPPAG00000034012	VARS	91	90.571	ENSCAPG00000013736	VARS	99	90.571	Cavia_aperea
ENSPPAG00000034012	VARS	100	91.772	ENSCPOG00000000870	VARS	100	91.772	Cavia_porcellus
ENSPPAG00000034012	VARS	100	98.101	ENSCCAG00000035656	VARS	100	98.101	Cebus_capucinus
ENSPPAG00000034012	VARS	100	98.813	ENSCATG00000022394	VARS	100	98.813	Cercocebus_atys
ENSPPAG00000034012	VARS	88	89.676	ENSCLAG00000009470	VARS	92	89.676	Chinchilla_lanigera
ENSPPAG00000034012	VARS	100	99.288	ENSCSAG00000008784	VARS	100	99.288	Chlorocebus_sabaeus
ENSPPAG00000034012	VARS	77	74.435	ENSCPBG00000007943	VARS	96	74.538	Chrysemys_picta_bellii
ENSPPAG00000034012	VARS	100	98.972	ENSCANG00000033570	VARS	100	98.972	Colobus_angolensis_palliatus
ENSPPAG00000034012	VARS	100	93.354	ENSCGRG00001005686	Vars	100	93.354	Cricetulus_griseus_chok1gshd
ENSPPAG00000034012	VARS	92	88.191	ENSCGRG00000013352	Vars	78	88.191	Cricetulus_griseus_crigri
ENSPPAG00000034012	VARS	100	64.585	ENSCSEG00000019652	vars	100	64.427	Cynoglossus_semilaevis
ENSPPAG00000034012	VARS	100	65.035	ENSCVAG00000022398	vars	100	65.035	Cyprinodon_variegatus
ENSPPAG00000034012	VARS	100	64.806	ENSDARG00000044575	vars	100	64.802	Danio_rerio
ENSPPAG00000034012	VARS	84	93.321	ENSDORG00000016433	Vars	95	93.321	Dipodomys_ordii
ENSPPAG00000034012	VARS	69	86.438	ENSETEG00000003824	VARS	76	86.438	Echinops_telfairi
ENSPPAG00000034012	VARS	50	70.780	ENSEBUG00000007086	vars	84	69.808	Eptatretus_burgeri
ENSPPAG00000034012	VARS	57	61.951	ENSEBUG00000004637	vars	100	62.225	Eptatretus_burgeri
ENSPPAG00000034012	VARS	100	96.044	ENSEASG00005015673	VARS	100	96.044	Equus_asinus_asinus
ENSPPAG00000034012	VARS	100	95.020	ENSECAG00000014620	VARS	100	95.494	Equus_caballus
ENSPPAG00000034012	VARS	83	93.772	ENSEEUG00000004116	VARS	83	93.772	Erinaceus_europaeus
ENSPPAG00000034012	VARS	100	64.302	ENSELUG00000006550	vars	97	64.302	Esox_lucius
ENSPPAG00000034012	VARS	100	95.174	ENSFCAG00000004510	VARS	100	95.174	Felis_catus
ENSPPAG00000034012	VARS	82	91.753	ENSFDAG00000011401	VARS	100	91.753	Fukomys_damarensis
ENSPPAG00000034012	VARS	100	65.113	ENSFHEG00000010672	vars	100	65.113	Fundulus_heteroclitus
ENSPPAG00000034012	VARS	92	66.140	ENSGMOG00000014908	vars	97	66.140	Gadus_morhua
ENSPPAG00000034012	VARS	100	65.370	ENSGAFG00000021630	vars	100	65.370	Gambusia_affinis
ENSPPAG00000034012	VARS	92	66.332	ENSGACG00000009601	vars	98	66.000	Gasterosteus_aculeatus
ENSPPAG00000034012	VARS	50	65.300	ENSGAGG00000006508	-	91	64.826	Gopherus_agassizii
ENSPPAG00000034012	VARS	100	99.604	ENSGGOG00000011364	VARS	100	99.604	Gorilla_gorilla
ENSPPAG00000034012	VARS	100	64.806	ENSHBUG00000017151	vars	97	64.569	Haplochromis_burtoni
ENSPPAG00000034012	VARS	100	90.981	ENSHGLG00000011646	VARS	100	90.665	Heterocephalus_glaber_female
ENSPPAG00000034012	VARS	93	83.389	ENSHGLG00100018062	VARS	100	83.306	Heterocephalus_glaber_male
ENSPPAG00000034012	VARS	99	64.496	ENSHCOG00000012198	vars	99	64.514	Hippocampus_comes
ENSPPAG00000034012	VARS	100	65.214	ENSIPUG00000005218	vars	100	65.214	Ictalurus_punctatus
ENSPPAG00000034012	VARS	100	95.020	ENSSTOG00000013112	VARS	100	95.020	Ictidomys_tridecemlineatus
ENSPPAG00000034012	VARS	100	72.073	ENSJJAG00000015343	-	100	72.073	Jaculus_jaculus
ENSPPAG00000034012	VARS	100	91.535	ENSJJAG00000019749	-	100	90.902	Jaculus_jaculus
ENSPPAG00000034012	VARS	100	65.008	ENSKMAG00000009455	vars	100	64.771	Kryptolebias_marmoratus
ENSPPAG00000034012	VARS	100	64.585	ENSLBEG00000010341	vars	100	64.348	Labrus_bergylta
ENSPPAG00000034012	VARS	94	62.613	ENSLACG00000015232	VARS	99	62.951	Latimeria_chalumnae
ENSPPAG00000034012	VARS	100	66.641	ENSLOCG00000004240	vars	100	66.641	Lepisosteus_oculatus
ENSPPAG00000034012	VARS	100	93.987	ENSLAFG00000023090	VARS	100	93.592	Loxodonta_africana
ENSPPAG00000034012	VARS	100	99.209	ENSMFAG00000001032	VARS	100	99.209	Macaca_fascicularis
ENSPPAG00000034012	VARS	100	99.209	ENSMMUG00000006828	VARS	100	99.209	Macaca_mulatta
ENSPPAG00000034012	VARS	100	99.209	ENSMNEG00000042072	VARS	100	99.209	Macaca_nemestrina
ENSPPAG00000034012	VARS	100	98.972	ENSMLEG00000039307	VARS	100	98.972	Mandrillus_leucophaeus
ENSPPAG00000034012	VARS	100	64.413	ENSMAMG00000003949	vars	100	64.665	Mastacembelus_armatus
ENSPPAG00000034012	VARS	100	64.884	ENSMZEG00005018327	vars	100	64.325	Maylandia_zebra
ENSPPAG00000034012	VARS	100	92.959	ENSMAUG00000006715	Vars	100	92.959	Mesocricetus_auratus
ENSPPAG00000034012	VARS	100	95.491	ENSMICG00000003548	VARS	100	96.020	Microcebus_murinus
ENSPPAG00000034012	VARS	100	90.190	ENSMOCG00000015404	Vars	100	90.032	Microtus_ochrogaster
ENSPPAG00000034012	VARS	100	64.129	ENSMMOG00000015801	vars	100	64.129	Mola_mola
ENSPPAG00000034012	VARS	100	86.946	ENSMODG00000015204	-	100	86.946	Monodelphis_domestica
ENSPPAG00000034012	VARS	99	64.516	ENSMALG00000022532	vars	99	64.381	Monopterus_albus
ENSPPAG00000034012	VARS	100	93.275	MGP_CAROLIEiJ_G0021491	Vars	100	92.801	Mus_caroli
ENSPPAG00000034012	VARS	100	93.275	ENSMUSG00000007029	Vars	100	92.801	Mus_musculus
ENSPPAG00000034012	VARS	100	92.642	MGP_PahariEiJ_G0020486	Vars	100	92.247	Mus_pahari
ENSPPAG00000034012	VARS	100	93.354	MGP_SPRETEiJ_G0022396	Vars	100	92.880	Mus_spretus
ENSPPAG00000034012	VARS	100	95.253	ENSMPUG00000010821	VARS	100	95.253	Mustela_putorius_furo
ENSPPAG00000034012	VARS	78	92.915	ENSMLUG00000013126	VARS	100	93.522	Myotis_lucifugus
ENSPPAG00000034012	VARS	100	92.405	ENSNGAG00000012151	Vars	100	92.722	Nannospalax_galili
ENSPPAG00000034012	VARS	100	64.574	ENSNBRG00000020520	vars	100	64.336	Neolamprologus_brichardi
ENSPPAG00000034012	VARS	100	98.813	ENSNLEG00000006351	VARS	100	98.813	Nomascus_leucogenys
ENSPPAG00000034012	VARS	100	83.149	ENSMEUG00000011378	VARS	100	83.149	Notamacropus_eugenii
ENSPPAG00000034012	VARS	100	93.987	ENSOPRG00000003607	VARS	100	93.987	Ochotona_princeps
ENSPPAG00000034012	VARS	100	91.535	ENSODEG00000017681	VARS	100	90.981	Octodon_degus
ENSPPAG00000034012	VARS	100	65.285	ENSONIG00000013064	vars	99	67.913	Oreochromis_niloticus
ENSPPAG00000034012	VARS	77	79.216	ENSOANG00000005400	VARS	98	78.385	Ornithorhynchus_anatinus
ENSPPAG00000034012	VARS	100	92.035	ENSOCUG00000022463	VARS	100	92.192	Oryctolagus_cuniculus
ENSPPAG00000034012	VARS	100	64.373	ENSORLG00000013063	vars	100	64.390	Oryzias_latipes
ENSPPAG00000034012	VARS	100	64.919	ENSORLG00020003504	vars	100	64.919	Oryzias_latipes_hni
ENSPPAG00000034012	VARS	100	64.815	ENSORLG00015009001	vars	100	64.815	Oryzias_latipes_hsok
ENSPPAG00000034012	VARS	100	64.660	ENSOMEG00000015016	vars	100	64.660	Oryzias_melastigma
ENSPPAG00000034012	VARS	100	95.411	ENSOGAG00000007515	VARS	100	95.411	Otolemur_garnettii
ENSPPAG00000034012	VARS	100	95.332	ENSPPRG00000014855	VARS	100	95.332	Panthera_pardus
ENSPPAG00000034012	VARS	85	95.260	ENSPTIG00000010462	VARS	95	95.238	Panthera_tigris_altaica
ENSPPAG00000034012	VARS	100	99.921	ENSPTRG00000017985	VARS	100	99.921	Pan_troglodytes
ENSPPAG00000034012	VARS	100	97.397	ENSPANG00000014565	VARS	100	97.397	Papio_anubis
ENSPPAG00000034012	VARS	100	63.861	ENSPKIG00000016304	vars	100	63.861	Paramormyrops_kingsleyae
ENSPPAG00000034012	VARS	100	65.800	ENSPMGG00000023909	vars	100	65.642	Periophthalmus_magnuspinnatus
ENSPPAG00000034012	VARS	100	93.908	ENSPEMG00000006639	Vars	100	93.908	Peromyscus_maniculatus_bairdii
ENSPPAG00000034012	VARS	100	86.392	ENSPCIG00000018553	VARS	100	86.392	Phascolarctos_cinereus
ENSPPAG00000034012	VARS	100	65.603	ENSPFOG00000015690	vars	100	65.603	Poecilia_formosa
ENSPPAG00000034012	VARS	100	66.168	ENSPLAG00000009590	vars	100	65.854	Poecilia_latipinna
ENSPPAG00000034012	VARS	100	65.603	ENSPMEG00000004708	vars	100	65.603	Poecilia_mexicana
ENSPPAG00000034012	VARS	100	63.965	ENSPREG00000013264	vars	100	63.636	Poecilia_reticulata
ENSPPAG00000034012	VARS	100	97.943	ENSPPYG00000016460	VARS	100	97.943	Pongo_abelii
ENSPPAG00000034012	VARS	86	92.998	ENSPCAG00000013565	VARS	86	92.998	Procavia_capensis
ENSPPAG00000034012	VARS	100	96.522	ENSPCOG00000010942	VARS	100	96.522	Propithecus_coquereli
ENSPPAG00000034012	VARS	100	91.693	ENSPVAG00000012403	VARS	100	91.693	Pteropus_vampyrus
ENSPPAG00000034012	VARS	100	64.806	ENSPNYG00000022511	vars	100	64.569	Pundamilia_nyererei
ENSPPAG00000034012	VARS	100	64.701	ENSPNAG00000020962	vars	100	64.546	Pygocentrus_nattereri
ENSPPAG00000034012	VARS	100	93.671	ENSRNOG00000000867	Vars	100	93.671	Rattus_norvegicus
ENSPPAG00000034012	VARS	100	99.209	ENSRBIG00000041669	VARS	100	99.209	Rhinopithecus_bieti
ENSPPAG00000034012	VARS	100	99.209	ENSRROG00000045490	VARS	100	99.209	Rhinopithecus_roxellana
ENSPPAG00000034012	VARS	100	97.627	ENSSBOG00000035402	VARS	100	97.627	Saimiri_boliviensis_boliviensis
ENSPPAG00000034012	VARS	100	81.697	ENSSHAG00000006937	VARS	100	81.932	Sarcophilus_harrisii
ENSPPAG00000034012	VARS	100	64.556	ENSSFOG00015014272	vars	100	64.402	Scleropages_formosus
ENSPPAG00000034012	VARS	100	63.622	ENSSMAG00000009596	vars	99	63.460	Scophthalmus_maximus
ENSPPAG00000034012	VARS	100	64.474	ENSSDUG00000014177	vars	100	64.236	Seriola_dumerili
ENSPPAG00000034012	VARS	100	64.396	ENSSLDG00000025316	vars	100	64.158	Seriola_lalandi_dorsalis
ENSPPAG00000034012	VARS	100	64.850	ENSSPAG00000017068	vars	100	64.798	Stegastes_partitus
ENSPPAG00000034012	VARS	100	93.518	ENSSSCG00000038950	VARS	100	93.992	Sus_scrofa
ENSPPAG00000034012	VARS	82	64.142	ENSTRUG00000012307	vars	98	64.183	Takifugu_rubripes
ENSPPAG00000034012	VARS	100	65.129	ENSTNIG00000008011	vars	100	64.969	Tetraodon_nigroviridis
ENSPPAG00000034012	VARS	54	96.255	ENSTBEG00000004728	-	60	96.255	Tupaia_belangeri
ENSPPAG00000034012	VARS	100	86.234	ENSTTRG00000014128	VARS	100	86.234	Tursiops_truncatus
ENSPPAG00000034012	VARS	100	91.667	ENSUAMG00000010424	VARS	100	91.667	Ursus_americanus
ENSPPAG00000034012	VARS	93	94.921	ENSUMAG00000013486	VARS	98	94.444	Ursus_maritimus
ENSPPAG00000034012	VARS	100	94.229	ENSVVUG00000021323	VARS	100	93.992	Vulpes_vulpes
ENSPPAG00000034012	VARS	96	62.975	ENSXETG00000024076	vars	98	62.136	Xenopus_tropicalis
ENSPPAG00000034012	VARS	100	65.512	ENSXCOG00000019172	vars	100	65.512	Xiphophorus_couchianus
ENSPPAG00000034012	VARS	100	65.292	ENSXMAG00000010927	vars	100	65.292	Xiphophorus_maculatus