EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000034327 (Gene tree)
Gene ID: 100968653
Gene Symbol: -
Alias: -
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 3294 bases
Position: chr20:40888560-40891853
Accession: 100968653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000022318	RRM_1	PF00076.22	3.9e-31	1	2
ENSPPAP00000022318	RRM_1	PF00076.22	3.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000045126	-	1032	XM_014343080	ENSPPAP00000022318	343 (aa)	XP_014198566	A0A2R9AZ20

Gene Model

Click here to download ENSPPAG00000034327's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03040	Spliceosome	KEGG
pps05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000034327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000034327	-	52	64.804	ENSPPAG00000029921	SRSF5	86	61.475
ENSPPAG00000034327	-	57	40.670	ENSPPAG00000043403	-	77	48.214
ENSPPAG00000034327	-	90	85.761	ENSPPAG00000043131	-	100	88.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000034327	-	100	99.709	ENSG00000124193	SRSF6	100	99.709	Homo_sapiens
ENSPPAG00000034327	-	94	85.538	ENSAMEG00000003710	SRSF6	94	85.276	Ailuropoda_melanoleuca
ENSPPAG00000034327	-	97	60.000	ENSACIG00000020091	-	95	79.528	Amphilophus_citrinellus
ENSPPAG00000034327	-	86	68.243	ENSACIG00000023658	-	56	87.222	Amphilophus_citrinellus
ENSPPAG00000034327	-	53	84.699	ENSAOCG00000004309	-	57	82.609	Amphiprion_ocellaris
ENSPPAG00000034327	-	66	70.742	ENSAPEG00000020746	-	66	79.255	Amphiprion_percula
ENSPPAG00000034327	-	53	88.108	ENSAPEG00000013086	-	53	87.634	Amphiprion_percula
ENSPPAG00000034327	-	53	82.418	ENSATEG00000007255	-	71	79.459	Anabas_testudineus
ENSPPAG00000034327	-	94	82.099	ENSACAG00000002061	SRSF6	93	84.615	Anolis_carolinensis
ENSPPAG00000034327	-	100	98.837	ENSANAG00000024080	SRSF6	100	98.837	Aotus_nancymaae
ENSPPAG00000034327	-	53	83.784	ENSAMXG00000042692	-	96	77.778	Astyanax_mexicanus
ENSPPAG00000034327	-	100	96.821	ENSBTAG00000008527	SRSF6	100	96.821	Bos_taurus
ENSPPAG00000034327	-	78	99.627	ENSCJAG00000048403	SRSF6	99	99.627	Callithrix_jacchus
ENSPPAG00000034327	-	100	97.110	ENSCAFG00000009289	SRSF6	100	97.110	Canis_familiaris
ENSPPAG00000034327	-	100	97.110	ENSCAFG00020013559	SRSF6	100	97.110	Canis_lupus_dingo
ENSPPAG00000034327	-	100	96.821	ENSCHIG00000009148	-	100	96.821	Capra_hircus
ENSPPAG00000034327	-	100	97.399	ENSCHIG00000015890	-	100	97.399	Capra_hircus
ENSPPAG00000034327	-	100	83.188	ENSTSYG00000026476	SRSF6	100	83.188	Carlito_syrichta
ENSPPAG00000034327	-	94	80.556	ENSCPOG00000011761	SRSF6	98	67.883	Cavia_porcellus
ENSPPAG00000034327	-	100	99.128	ENSCCAG00000026018	-	100	99.128	Cebus_capucinus
ENSPPAG00000034327	-	94	71.605	ENSCCAG00000018540	-	62	87.234	Cebus_capucinus
ENSPPAG00000034327	-	100	99.128	ENSCATG00000030794	SRSF6	100	99.128	Cercocebus_atys
ENSPPAG00000034327	-	100	96.532	ENSCLAG00000010247	SRSF6	100	96.532	Chinchilla_lanigera
ENSPPAG00000034327	-	100	99.128	ENSCSAG00000014022	SRSF6	100	99.128	Chlorocebus_sabaeus
ENSPPAG00000034327	-	85	100.000	ENSCHOG00000000561	SRSF6	77	100.000	Choloepus_hoffmanni
ENSPPAG00000034327	-	54	92.021	ENSCPBG00000018200	SRSF6	94	84.756	Chrysemys_picta_bellii
ENSPPAG00000034327	-	100	98.837	ENSCANG00000037774	-	100	98.837	Colobus_angolensis_palliatus
ENSPPAG00000034327	-	100	85.131	ENSCANG00000042529	-	100	85.131	Colobus_angolensis_palliatus
ENSPPAG00000034327	-	100	96.512	ENSCGRG00001022339	Srsf6	100	96.512	Cricetulus_griseus_chok1gshd
ENSPPAG00000034327	-	63	95.814	ENSCGRG00000006618	Srsf6	100	95.814	Cricetulus_griseus_crigri
ENSPPAG00000034327	-	53	83.422	ENSDARG00000016783	srsf6b	82	89.744	Danio_rerio
ENSPPAG00000034327	-	94	95.679	ENSDNOG00000008410	SRSF6	94	95.679	Dasypus_novemcinctus
ENSPPAG00000034327	-	100	97.977	ENSDORG00000028378	Srsf6	100	97.977	Dipodomys_ordii
ENSPPAG00000034327	-	92	92.500	ENSETEG00000006221	SRSF6	94	89.846	Echinops_telfairi
ENSPPAG00000034327	-	100	96.532	ENSEASG00005023429	SRSF6	100	96.532	Equus_asinus_asinus
ENSPPAG00000034327	-	100	96.532	ENSECAG00000023932	SRSF6	100	96.532	Equus_caballus
ENSPPAG00000034327	-	56	93.846	ENSEEUG00000002324	SRSF6	90	93.939	Erinaceus_europaeus
ENSPPAG00000034327	-	52	83.978	ENSELUG00000013506	SRSF6	70	87.179	Esox_lucius
ENSPPAG00000034327	-	53	85.484	ENSELUG00000024182	SRSF6	90	77.236	Esox_lucius
ENSPPAG00000034327	-	100	97.110	ENSFCAG00000032814	SRSF6	100	97.110	Felis_catus
ENSPPAG00000034327	-	94	82.043	ENSFDAG00000012191	SRSF6	94	76.235	Fukomys_damarensis
ENSPPAG00000034327	-	87	70.820	ENSFHEG00000023065	srsf6a	55	86.957	Fundulus_heteroclitus
ENSPPAG00000034327	-	52	82.873	ENSGMOG00000014458	srsf6a	52	78.125	Gadus_morhua
ENSPPAG00000034327	-	52	71.508	ENSGMOG00000006105	srsf6a	62	69.832	Gadus_morhua
ENSPPAG00000034327	-	92	82.209	ENSGALG00000000990	SRSF6	94	83.384	Gallus_gallus
ENSPPAG00000034327	-	87	58.929	ENSGACG00000006084	srsf6a	53	83.333	Gasterosteus_aculeatus
ENSPPAG00000034327	-	54	92.021	ENSGAGG00000003238	SRSF6	94	84.756	Gopherus_agassizii
ENSPPAG00000034327	-	100	99.709	ENSGGOG00000009808	SRSF6	100	99.709	Gorilla_gorilla
ENSPPAG00000034327	-	73	61.000	ENSHBUG00000006386	-	58	83.152	Haplochromis_burtoni
ENSPPAG00000034327	-	100	96.532	ENSHGLG00000007348	SRSF6	100	96.532	Heterocephalus_glaber_female
ENSPPAG00000034327	-	90	75.719	ENSHGLG00000007701	-	58	78.610	Heterocephalus_glaber_female
ENSPPAG00000034327	-	94	82.353	ENSHGLG00100005043	SRSF6	94	76.543	Heterocephalus_glaber_male
ENSPPAG00000034327	-	53	83.060	ENSHCOG00000002740	srsf6a	57	82.609	Hippocampus_comes
ENSPPAG00000034327	-	53	86.413	ENSIPUG00000004776	-	72	71.674	Ictalurus_punctatus
ENSPPAG00000034327	-	100	98.547	ENSSTOG00000010866	SRSF6	100	98.547	Ictidomys_tridecemlineatus
ENSPPAG00000034327	-	56	96.335	ENSJJAG00000020690	Srsf6	91	96.373	Jaculus_jaculus
ENSPPAG00000034327	-	53	84.239	ENSLBEG00000007356	srsf6a	52	84.946	Labrus_bergylta
ENSPPAG00000034327	-	89	82.581	ENSLACG00000005466	SRSF6	54	91.304	Latimeria_chalumnae
ENSPPAG00000034327	-	69	95.816	ENSLAFG00000006682	SRSF6	89	95.652	Loxodonta_africana
ENSPPAG00000034327	-	100	99.128	ENSMFAG00000036925	SRSF6	100	99.128	Macaca_fascicularis
ENSPPAG00000034327	-	100	99.128	ENSMMUG00000006742	SRSF6	100	99.128	Macaca_mulatta
ENSPPAG00000034327	-	100	97.674	ENSMNEG00000038270	-	100	97.674	Macaca_nemestrina
ENSPPAG00000034327	-	100	98.547	ENSMNEG00000027392	-	100	98.547	Macaca_nemestrina
ENSPPAG00000034327	-	63	99.070	ENSMLEG00000031524	SRSF6	100	99.070	Mandrillus_leucophaeus
ENSPPAG00000034327	-	53	87.568	ENSMAMG00000017161	srsf6a	53	87.097	Mastacembelus_armatus
ENSPPAG00000034327	-	62	70.996	ENSMZEG00005008032	-	57	83.152	Maylandia_zebra
ENSPPAG00000034327	-	100	97.688	ENSMICG00000008537	SRSF6	100	97.688	Microcebus_murinus
ENSPPAG00000034327	-	63	95.814	ENSMOCG00000018738	Srsf6	100	95.814	Microtus_ochrogaster
ENSPPAG00000034327	-	54	95.161	ENSMODG00000003107	SRSF6	95	90.798	Monodelphis_domestica
ENSPPAG00000034327	-	100	95.640	MGP_CAROLIEiJ_G0024606	Srsf6	100	95.640	Mus_caroli
ENSPPAG00000034327	-	100	95.930	ENSMUSG00000016921	Srsf6	100	95.930	Mus_musculus
ENSPPAG00000034327	-	100	95.640	MGP_PahariEiJ_G0026050	Srsf6	100	95.640	Mus_pahari
ENSPPAG00000034327	-	100	95.930	MGP_SPRETEiJ_G0025528	Srsf6	100	95.930	Mus_spretus
ENSPPAG00000034327	-	83	97.222	ENSMPUG00000017692	SRSF6	99	97.222	Mustela_putorius_furo
ENSPPAG00000034327	-	93	79.939	ENSMLUG00000016618	SRSF6	94	75.284	Myotis_lucifugus
ENSPPAG00000034327	-	100	95.930	ENSNGAG00000017560	Srsf6	100	95.930	Nannospalax_galili
ENSPPAG00000034327	-	53	81.967	ENSNBRG00000014709	-	58	83.152	Neolamprologus_brichardi
ENSPPAG00000034327	-	52	87.978	ENSNBRG00000001846	-	52	87.097	Neolamprologus_brichardi
ENSPPAG00000034327	-	100	99.709	ENSNLEG00000006524	SRSF6	100	99.709	Nomascus_leucogenys
ENSPPAG00000034327	-	54	95.161	ENSMEUG00000014615	SRSF6	99	92.459	Notamacropus_eugenii
ENSPPAG00000034327	-	75	96.923	ENSOPRG00000002017	-	100	96.923	Ochotona_princeps
ENSPPAG00000034327	-	53	83.607	ENSONIG00000020247	-	53	83.696	Oreochromis_niloticus
ENSPPAG00000034327	-	83	80.130	ENSOCUG00000009785	-	98	83.784	Oryctolagus_cuniculus
ENSPPAG00000034327	-	74	58.103	ENSOCUG00000023999	-	70	63.483	Oryctolagus_cuniculus
ENSPPAG00000034327	-	100	96.243	ENSOGAG00000014468	SRSF6	100	96.243	Otolemur_garnettii
ENSPPAG00000034327	-	93	93.478	ENSOARG00000003117	SRSF6	94	93.231	Ovis_aries
ENSPPAG00000034327	-	100	97.110	ENSPPRG00000008917	SRSF6	100	97.110	Panthera_pardus
ENSPPAG00000034327	-	63	96.774	ENSPTIG00000019153	SRSF6	100	96.774	Panthera_tigris_altaica
ENSPPAG00000034327	-	100	99.419	ENSPTRG00000044686	-	100	99.419	Pan_troglodytes
ENSPPAG00000034327	-	90	85.761	ENSPTRG00000046274	-	100	88.026	Pan_troglodytes
ENSPPAG00000034327	-	100	99.128	ENSPANG00000035224	SRSF6	100	99.128	Papio_anubis
ENSPPAG00000034327	-	100	62.857	ENSPKIG00000018463	-	77	91.026	Paramormyrops_kingsleyae
ENSPPAG00000034327	-	88	71.429	ENSPMGG00000014963	srsf6a	55	88.587	Periophthalmus_magnuspinnatus
ENSPPAG00000034327	-	94	86.728	ENSPCIG00000003820	SRSF6	95	90.491	Phascolarctos_cinereus
ENSPPAG00000034327	-	53	87.931	ENSPFOG00000006437	srsf6a	50	82.632	Poecilia_formosa
ENSPPAG00000034327	-	87	62.893	ENSPLAG00000009243	srsf6a	80	81.890	Poecilia_latipinna
ENSPPAG00000034327	-	53	84.783	ENSPMEG00000006042	SRSF6	54	86.486	Poecilia_mexicana
ENSPPAG00000034327	-	100	99.709	ENSPPYG00000011019	SRSF6	100	99.709	Pongo_abelii
ENSPPAG00000034327	-	54	97.838	ENSPCAG00000010954	SRSF6	96	93.189	Procavia_capensis
ENSPPAG00000034327	-	100	97.688	ENSPCOG00000026364	SRSF6	100	97.688	Propithecus_coquereli
ENSPPAG00000034327	-	94	95.652	ENSPVAG00000015232	SRSF6	94	95.356	Pteropus_vampyrus
ENSPPAG00000034327	-	53	81.967	ENSPNYG00000004944	-	58	83.152	Pundamilia_nyererei
ENSPPAG00000034327	-	52	87.978	ENSPNYG00000011272	-	51	87.097	Pundamilia_nyererei
ENSPPAG00000034327	-	100	95.930	ENSRNOG00000006380	Srsf6	100	95.930	Rattus_norvegicus
ENSPPAG00000034327	-	100	97.384	ENSRBIG00000041414	SRSF6	100	97.384	Rhinopithecus_bieti
ENSPPAG00000034327	-	100	99.128	ENSRROG00000029989	SRSF6	100	99.128	Rhinopithecus_roxellana
ENSPPAG00000034327	-	100	98.837	ENSSBOG00000033708	-	100	98.837	Saimiri_boliviensis_boliviensis
ENSPPAG00000034327	-	94	87.037	ENSSHAG00000012805	SRSF6	95	90.491	Sarcophilus_harrisii
ENSPPAG00000034327	-	88	63.988	ENSSFOG00015019681	-	53	81.443	Scleropages_formosus
ENSPPAG00000034327	-	53	79.670	ENSSMAG00000017447	-	55	79.348	Scophthalmus_maximus
ENSPPAG00000034327	-	53	87.568	ENSSDUG00000016097	srsf6a	53	87.097	Seriola_dumerili
ENSPPAG00000034327	-	53	87.568	ENSSLDG00000022841	srsf6a	54	87.097	Seriola_lalandi_dorsalis
ENSPPAG00000034327	-	75	95.769	ENSSARG00000001602	SRSF6	100	95.769	Sorex_araneus
ENSPPAG00000034327	-	53	94.536	ENSSPUG00000004967	SRSF6	94	86.997	Sphenodon_punctatus
ENSPPAG00000034327	-	75	70.189	ENSSPAG00000002362	srsf6a	67	85.185	Stegastes_partitus
ENSPPAG00000034327	-	100	96.532	ENSSSCG00000007362	SRSF6	100	96.532	Sus_scrofa
ENSPPAG00000034327	-	92	84.211	ENSTGUG00000003455	SRSF6	94	84.756	Taeniopygia_guttata
ENSPPAG00000034327	-	87	70.764	ENSTNIG00000001692	srsf6a	57	85.484	Tetraodon_nigroviridis
ENSPPAG00000034327	-	84	94.774	ENSTBEG00000013448	SRSF6	92	94.774	Tupaia_belangeri
ENSPPAG00000034327	-	75	96.154	ENSTTRG00000015410	SRSF6	100	96.154	Tursiops_truncatus
ENSPPAG00000034327	-	100	97.110	ENSUAMG00000003559	SRSF6	100	97.110	Ursus_americanus
ENSPPAG00000034327	-	63	96.774	ENSUMAG00000001154	SRSF6	100	96.774	Ursus_maritimus
ENSPPAG00000034327	-	75	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSPPAG00000034327	-	53	86.339	ENSXMAG00000021849	srsf6a	55	85.870	Xiphophorus_maculatus