EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000035069 (Gene tree)
Gene ID: 100968931
Gene Symbol: CASC3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 31017 bases
Position: chr17:17339060-17370076
Accession: 100968931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000023829	Btz	PF09405.10	1.6e-23	1	1
ENSPPAP00000023833	Btz	PF09405.10	1.9e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000046658	CASC3-202	2103	-	ENSPPAP00000023833	700 (aa)	-	A0A2R9B2Q4
ENSPPAT00000046654	CASC3-201	4096	XM_003831424	ENSPPAP00000023829	703 (aa)	XP_003831472	A0A2R9B9B7

Gene Model

Click here to download ENSPPAG00000035069's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps03013	RNA transport	KEGG
pps03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000035069's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000035069	CASC3	100	99.858	ENSG00000108349	CASC3	100	99.858	Homo_sapiens
ENSPPAG00000035069	CASC3	100	95.875	ENSAMEG00000007764	CASC3	100	95.875	Ailuropoda_melanoleuca
ENSPPAG00000035069	CASC3	78	49.909	ENSACIG00000000720	casc3	83	50.179	Amphilophus_citrinellus
ENSPPAG00000035069	CASC3	83	52.751	ENSAOCG00000016676	casc3	76	51.485	Amphiprion_ocellaris
ENSPPAG00000035069	CASC3	74	52.751	ENSAPEG00000006787	casc3	76	51.485	Amphiprion_percula
ENSPPAG00000035069	CASC3	73	55.172	ENSATEG00000017196	casc3	69	53.226	Anabas_testudineus
ENSPPAG00000035069	CASC3	91	72.111	ENSACAG00000002674	CASC3	99	66.758	Anolis_carolinensis
ENSPPAG00000035069	CASC3	99	84.949	ENSANAG00000034820	-	99	89.971	Aotus_nancymaae
ENSPPAG00000035069	CASC3	66	97.170	ENSANAG00000031954	-	100	97.170	Aotus_nancymaae
ENSPPAG00000035069	CASC3	74	55.205	ENSACLG00000016198	casc3	80	54.098	Astatotilapia_calliptera
ENSPPAG00000035069	CASC3	100	93.314	ENSBTAG00000006250	CASC3	100	93.314	Bos_taurus
ENSPPAG00000035069	CASC3	100	95.021	ENSCJAG00000016032	CASC3	100	95.021	Callithrix_jacchus
ENSPPAG00000035069	CASC3	100	95.448	ENSCAFG00000016141	CASC3	100	95.448	Canis_familiaris
ENSPPAG00000035069	CASC3	100	94.602	ENSCAFG00020018882	CASC3	100	94.719	Canis_lupus_dingo
ENSPPAG00000035069	CASC3	100	92.714	ENSCHIG00000006338	CASC3	100	92.714	Capra_hircus
ENSPPAG00000035069	CASC3	100	88.620	ENSTSYG00000002975	CASC3	89	95.185	Carlito_syrichta
ENSPPAG00000035069	CASC3	88	89.123	ENSCAPG00000010514	CASC3	100	89.123	Cavia_aperea
ENSPPAG00000035069	CASC3	100	88.478	ENSCPOG00000015139	CASC3	100	88.336	Cavia_porcellus
ENSPPAG00000035069	CASC3	100	95.597	ENSCCAG00000033620	CASC3	100	95.170	Cebus_capucinus
ENSPPAG00000035069	CASC3	100	97.443	ENSCATG00000033593	CASC3	100	97.443	Cercocebus_atys
ENSPPAG00000035069	CASC3	100	90.327	ENSCLAG00000013730	CASC3	100	89.900	Chinchilla_lanigera
ENSPPAG00000035069	CASC3	100	97.443	ENSCSAG00000002777	CASC3	100	97.443	Chlorocebus_sabaeus
ENSPPAG00000035069	CASC3	99	75.281	ENSCPBG00000004750	CASC3	99	74.579	Chrysemys_picta_bellii
ENSPPAG00000035069	CASC3	100	97.301	ENSCANG00000008814	CASC3	100	97.301	Colobus_angolensis_palliatus
ENSPPAG00000035069	CASC3	100	92.461	ENSCGRG00001014706	Casc3	100	92.319	Cricetulus_griseus_chok1gshd
ENSPPAG00000035069	CASC3	100	85.206	ENSCGRG00000001952	Casc3	96	92.135	Cricetulus_griseus_crigri
ENSPPAG00000035069	CASC3	88	48.424	ENSCSEG00000010047	casc3	59	59.563	Cynoglossus_semilaevis
ENSPPAG00000035069	CASC3	66	69.065	ENSCVAG00000014935	casc3	77	53.871	Cyprinodon_variegatus
ENSPPAG00000035069	CASC3	100	93.741	ENSDNOG00000017249	CASC3	96	93.741	Dasypus_novemcinctus
ENSPPAG00000035069	CASC3	100	85.064	ENSETEG00000013720	CASC3	100	84.922	Echinops_telfairi
ENSPPAG00000035069	CASC3	99	36.495	ENSEBUG00000010654	casc3	82	42.806	Eptatretus_burgeri
ENSPPAG00000035069	CASC3	100	93.750	ENSEASG00005002909	CASC3	100	94.754	Equus_asinus_asinus
ENSPPAG00000035069	CASC3	100	94.595	ENSECAG00000019947	CASC3	88	94.595	Equus_caballus
ENSPPAG00000035069	CASC3	73	88.672	ENSEEUG00000014253	CASC3	100	88.672	Erinaceus_europaeus
ENSPPAG00000035069	CASC3	100	95.590	ENSFCAG00000014998	CASC3	100	95.590	Felis_catus
ENSPPAG00000035069	CASC3	88	73.041	ENSFALG00000000412	CASC3	98	72.756	Ficedula_albicollis
ENSPPAG00000035069	CASC3	93	87.768	ENSFDAG00000020696	CASC3	100	87.768	Fukomys_damarensis
ENSPPAG00000035069	CASC3	74	54.978	ENSFHEG00000015793	casc3	77	52.258	Fundulus_heteroclitus
ENSPPAG00000035069	CASC3	90	76.101	ENSGALG00000031813	CASC3	99	69.744	Gallus_gallus
ENSPPAG00000035069	CASC3	73	51.793	ENSGAFG00000017148	casc3	67	48.701	Gambusia_affinis
ENSPPAG00000035069	CASC3	88	77.868	ENSGAGG00000008432	CASC3	94	77.706	Gopherus_agassizii
ENSPPAG00000035069	CASC3	100	99.147	ENSGGOG00000005067	CASC3	100	99.147	Gorilla_gorilla
ENSPPAG00000035069	CASC3	74	55.205	ENSHBUG00000013155	casc3	80	54.098	Haplochromis_burtoni
ENSPPAG00000035069	CASC3	100	89.758	ENSHGLG00000012117	CASC3	100	89.758	Heterocephalus_glaber_female
ENSPPAG00000035069	CASC3	89	89.457	ENSHGLG00100002268	CASC3	99	89.465	Heterocephalus_glaber_male
ENSPPAG00000035069	CASC3	100	93.741	ENSSTOG00000006374	CASC3	100	93.741	Ictidomys_tridecemlineatus
ENSPPAG00000035069	CASC3	100	90.341	ENSJJAG00000023525	Casc3	100	90.483	Jaculus_jaculus
ENSPPAG00000035069	CASC3	59	63.025	ENSKMAG00000019507	casc3	81	48.511	Kryptolebias_marmoratus
ENSPPAG00000035069	CASC3	65	68.345	ENSLBEG00000005435	casc3	57	60.112	Labrus_bergylta
ENSPPAG00000035069	CASC3	98	56.783	ENSLACG00000013200	CASC3	99	55.785	Latimeria_chalumnae
ENSPPAG00000035069	CASC3	73	73.430	ENSLOCG00000013518	casc3	71	70.531	Lepisosteus_oculatus
ENSPPAG00000035069	CASC3	100	92.319	ENSLAFG00000000606	CASC3	100	92.319	Loxodonta_africana
ENSPPAG00000035069	CASC3	100	97.443	ENSMFAG00000041496	CASC3	100	99.007	Macaca_fascicularis
ENSPPAG00000035069	CASC3	100	97.443	ENSMMUG00000045187	CASC3	100	97.443	Macaca_mulatta
ENSPPAG00000035069	CASC3	89	97.289	ENSMLEG00000029049	CASC3	99	97.289	Mandrillus_leucophaeus
ENSPPAG00000035069	CASC3	75	52.756	ENSMAMG00000005235	casc3	69	54.724	Mastacembelus_armatus
ENSPPAG00000035069	CASC3	74	55.205	ENSMZEG00005003815	casc3	80	54.098	Maylandia_zebra
ENSPPAG00000035069	CASC3	86	75.000	ENSMGAG00000013247	CASC3	99	72.683	Meleagris_gallopavo
ENSPPAG00000035069	CASC3	71	91.000	ENSMAUG00000006023	Casc3	100	75.676	Mesocricetus_auratus
ENSPPAG00000035069	CASC3	100	92.756	ENSMICG00000003321	CASC3	100	92.898	Microcebus_murinus
ENSPPAG00000035069	CASC3	100	91.465	ENSMOCG00000013644	Casc3	100	90.327	Microtus_ochrogaster
ENSPPAG00000035069	CASC3	78	53.704	ENSMMOG00000014339	casc3	70	53.712	Mola_mola
ENSPPAG00000035069	CASC3	100	78.187	ENSMODG00000013044	CASC3	92	78.612	Monodelphis_domestica
ENSPPAG00000035069	CASC3	100	90.896	MGP_CAROLIEiJ_G0017099	Casc3	100	89.900	Mus_caroli
ENSPPAG00000035069	CASC3	100	90.185	ENSMUSG00000078676	Casc3	100	89.189	Mus_musculus
ENSPPAG00000035069	CASC3	100	90.185	MGP_SPRETEiJ_G0017943	Casc3	100	89.189	Mus_spretus
ENSPPAG00000035069	CASC3	100	94.452	ENSMPUG00000014903	CASC3	100	94.452	Mustela_putorius_furo
ENSPPAG00000035069	CASC3	100	92.199	ENSMLUG00000010520	CASC3	100	91.206	Myotis_lucifugus
ENSPPAG00000035069	CASC3	100	91.323	ENSNGAG00000023121	Casc3	100	90.327	Nannospalax_galili
ENSPPAG00000035069	CASC3	100	97.724	ENSNLEG00000001598	CASC3	100	97.724	Nomascus_leucogenys
ENSPPAG00000035069	CASC3	83	91.975	ENSMEUG00000015662	CASC3	100	91.463	Notamacropus_eugenii
ENSPPAG00000035069	CASC3	73	90.430	ENSOPRG00000007240	-	79	100.000	Ochotona_princeps
ENSPPAG00000035069	CASC3	100	89.518	ENSODEG00000017858	CASC3	100	89.802	Octodon_degus
ENSPPAG00000035069	CASC3	74	55.205	ENSONIG00000009337	casc3	91	51.406	Oreochromis_niloticus
ENSPPAG00000035069	CASC3	79	54.671	ENSOANG00000003499	-	80	70.000	Ornithorhynchus_anatinus
ENSPPAG00000035069	CASC3	100	93.741	ENSOCUG00000002954	CASC3	100	93.457	Oryctolagus_cuniculus
ENSPPAG00000035069	CASC3	99	94.850	ENSOGAG00000034486	CASC3	98	94.850	Otolemur_garnettii
ENSPPAG00000035069	CASC3	100	93.172	ENSOARG00000013239	CASC3	100	93.172	Ovis_aries
ENSPPAG00000035069	CASC3	100	95.590	ENSPPRG00000023670	CASC3	100	95.590	Panthera_pardus
ENSPPAG00000035069	CASC3	91	95.133	ENSPTIG00000010891	CASC3	91	95.133	Panthera_tigris_altaica
ENSPPAG00000035069	CASC3	100	97.443	ENSPANG00000021708	CASC3	100	97.443	Papio_anubis
ENSPPAG00000035069	CASC3	100	92.034	ENSPEMG00000009774	Casc3	100	91.607	Peromyscus_maniculatus_bairdii
ENSPPAG00000035069	CASC3	100	81.135	ENSPCIG00000025678	CASC3	100	82.553	Phascolarctos_cinereus
ENSPPAG00000035069	CASC3	90	48.844	ENSPFOG00000017632	casc3	100	45.964	Poecilia_formosa
ENSPPAG00000035069	CASC3	76	53.605	ENSPLAG00000005268	casc3	77	53.398	Poecilia_latipinna
ENSPPAG00000035069	CASC3	68	47.035	ENSPMEG00000010299	casc3	73	48.451	Poecilia_mexicana
ENSPPAG00000035069	CASC3	65	67.143	ENSPREG00000011856	casc3	82	50.987	Poecilia_reticulata
ENSPPAG00000035069	CASC3	100	97.724	ENSPPYG00000008467	CASC3	100	97.724	Pongo_abelii
ENSPPAG00000035069	CASC3	100	92.188	ENSPCOG00000008183	CASC3	100	93.324	Propithecus_coquereli
ENSPPAG00000035069	CASC3	100	94.168	ENSPVAG00000008556	CASC3	100	94.168	Pteropus_vampyrus
ENSPPAG00000035069	CASC3	74	55.205	ENSPNYG00000011962	casc3	80	54.098	Pundamilia_nyererei
ENSPPAG00000035069	CASC3	92	90.397	ENSRNOG00000009716	Casc3	53	90.560	Rattus_norvegicus
ENSPPAG00000035069	CASC3	100	97.585	ENSRBIG00000033289	CASC3	100	97.004	Rhinopithecus_bieti
ENSPPAG00000035069	CASC3	100	97.585	ENSRROG00000022337	CASC3	100	97.585	Rhinopithecus_roxellana
ENSPPAG00000035069	CASC3	88	96.117	ENSSBOG00000031406	CASC3	98	96.117	Saimiri_boliviensis_boliviensis
ENSPPAG00000035069	CASC3	89	84.554	ENSSHAG00000013338	CASC3	99	84.160	Sarcophilus_harrisii
ENSPPAG00000035069	CASC3	65	66.667	ENSSMAG00000016096	casc3	55	65.563	Scophthalmus_maximus
ENSPPAG00000035069	CASC3	61	75.424	ENSSLDG00000020308	casc3	68	70.229	Seriola_lalandi_dorsalis
ENSPPAG00000035069	CASC3	85	80.303	ENSSARG00000010378	CASC3	98	80.303	Sorex_araneus
ENSPPAG00000035069	CASC3	78	52.675	ENSSPAG00000023008	casc3	77	51.466	Stegastes_partitus
ENSPPAG00000035069	CASC3	89	92.332	ENSSSCG00000017477	CASC3	98	92.295	Sus_scrofa
ENSPPAG00000035069	CASC3	75	73.624	ENSTGUG00000002300	CASC3	99	73.333	Taeniopygia_guttata
ENSPPAG00000035069	CASC3	66	97.170	ENSTBEG00000017459	CASC3	67	97.170	Tupaia_belangeri
ENSPPAG00000035069	CASC3	86	83.444	ENSTTRG00000016896	CASC3	98	83.333	Tursiops_truncatus
ENSPPAG00000035069	CASC3	100	94.460	ENSUAMG00000015116	CASC3	100	94.754	Ursus_americanus
ENSPPAG00000035069	CASC3	89	94.409	ENSUMAG00000017697	CASC3	100	94.330	Ursus_maritimus
ENSPPAG00000035069	CASC3	75	100.000	ENSVPAG00000000799	CASC3	75	100.000	Vicugna_pacos
ENSPPAG00000035069	CASC3	100	95.448	ENSVVUG00000000997	CASC3	100	95.448	Vulpes_vulpes
ENSPPAG00000035069	CASC3	89	59.213	ENSXETG00000024395	casc3	98	56.662	Xenopus_tropicalis
ENSPPAG00000035069	CASC3	68	64.286	ENSXMAG00000013937	casc3	77	50.479	Xiphophorus_maculatus