EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPAG00000035119 (Gene tree)
Gene ID: 100974493
Gene Symbol: RTCA
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 25543 bases
Position: chr1:101638173-101663715
Accession: 100974493
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000023941	RTC	PF01137.21	1.8e-81	1	1
ENSPPAP00000023936	RTC	PF01137.21	5.7e-63	1	1
ENSPPAP00000023936	RTC_insert	PF05189.13	3.9e-25	1	1
ENSPPAP00000023941	RTC_insert	PF05189.13	6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000046761	RTCA-201	1676	XM_008960559	ENSPPAP00000023936	309 (aa)	XP_008958807	A0A2R9B4J6
ENSPPAT00000046766	RTCA-202	1140	XM_003808477	ENSPPAP00000023941	379 (aa)	XP_003808525	A0A2R9B4J9

Gene Model

Click here to download ENSPPAG00000035119's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000035119's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000035119	RTCA	100	99.029	ENSG00000137996	RTCA	100	98.945	Homo_sapiens
ENSPPAG00000035119	RTCA	65	30.189	ENSG00000120158	RCL1	96	30.189	Homo_sapiens
ENSPPAG00000035119	RTCA	100	70.227	ENSAPOG00000001345	rtca	98	68.717	Acanthochromis_polyacanthus
ENSPPAG00000035119	RTCA	87	94.052	ENSAMEG00000008855	RTCA	100	94.052	Ailuropoda_melanoleuca
ENSPPAG00000035119	RTCA	100	70.874	ENSACIG00000019643	rtca	99	68.984	Amphilophus_citrinellus
ENSPPAG00000035119	RTCA	100	70.227	ENSAOCG00000014979	rtca	99	68.074	Amphiprion_ocellaris
ENSPPAG00000035119	RTCA	100	70.227	ENSAPEG00000006945	rtca	99	68.074	Amphiprion_percula
ENSPPAG00000035119	RTCA	100	70.227	ENSATEG00000006315	rtca	96	68.407	Anabas_testudineus
ENSPPAG00000035119	RTCA	100	82.201	ENSAPLG00000015430	RTCA	100	77.657	Anas_platyrhynchos
ENSPPAG00000035119	RTCA	100	97.411	ENSANAG00000025446	RTCA	100	96.306	Aotus_nancymaae
ENSPPAG00000035119	RTCA	100	69.903	ENSACLG00000020770	rtca	99	67.546	Astatotilapia_calliptera
ENSPPAG00000035119	RTCA	100	72.168	ENSAMXG00000043271	rtca	100	70.185	Astyanax_mexicanus
ENSPPAG00000035119	RTCA	100	95.146	ENSBTAG00000006321	RTCA	100	92.084	Bos_taurus
ENSPPAG00000035119	RTCA	100	97.087	ENSCJAG00000003398	RTCA	100	93.931	Callithrix_jacchus
ENSPPAG00000035119	RTCA	100	95.469	ENSCAFG00000020010	RTCA	68	92.084	Canis_familiaris
ENSPPAG00000035119	RTCA	100	95.469	ENSCAFG00020011528	RTCA	57	92.084	Canis_lupus_dingo
ENSPPAG00000035119	RTCA	100	94.822	ENSCHIG00000018937	RTCA	100	91.821	Capra_hircus
ENSPPAG00000035119	RTCA	100	92.233	ENSTSYG00000011305	RTCA	100	91.293	Carlito_syrichta
ENSPPAG00000035119	RTCA	100	96.764	ENSCCAG00000021844	RTCA	100	96.306	Cebus_capucinus
ENSPPAG00000035119	RTCA	100	98.153	ENSCATG00000019364	RTCA	100	98.153	Cercocebus_atys
ENSPPAG00000035119	RTCA	100	95.146	ENSCLAG00000006125	RTCA	100	95.268	Chinchilla_lanigera
ENSPPAG00000035119	RTCA	100	98.382	ENSCSAG00000001509	RTCA	100	94.987	Chlorocebus_sabaeus
ENSPPAG00000035119	RTCA	100	93.528	ENSCHOG00000005211	RTCA	100	90.237	Choloepus_hoffmanni
ENSPPAG00000035119	RTCA	100	83.172	ENSCPBG00000026658	RTCA	100	80.739	Chrysemys_picta_bellii
ENSPPAG00000035119	RTCA	100	55.806	ENSCING00000007875	-	98	54.545	Ciona_intestinalis
ENSPPAG00000035119	RTCA	100	53.074	ENSCSAVG00000007269	-	98	52.279	Ciona_savignyi
ENSPPAG00000035119	RTCA	100	98.153	ENSCANG00000040106	RTCA	100	98.153	Colobus_angolensis_palliatus
ENSPPAG00000035119	RTCA	87	91.450	ENSCGRG00001013163	Rtca	85	91.450	Cricetulus_griseus_chok1gshd
ENSPPAG00000035119	RTCA	100	68.932	ENSCSEG00000000530	rtca	98	66.402	Cynoglossus_semilaevis
ENSPPAG00000035119	RTCA	100	55.937	ENSCVAG00000021809	rtca	100	55.937	Cyprinodon_variegatus
ENSPPAG00000035119	RTCA	100	73.463	ENSDARG00000002215	rtca	100	70.976	Danio_rerio
ENSPPAG00000035119	RTCA	65	30.144	ENSDNOG00000019911	RCL1	96	30.144	Dasypus_novemcinctus
ENSPPAG00000035119	RTCA	100	93.528	ENSDNOG00000000456	RTCA	100	90.237	Dasypus_novemcinctus
ENSPPAG00000035119	RTCA	100	92.233	ENSDORG00000005448	Rtca	100	89.446	Dipodomys_ordii
ENSPPAG00000035119	RTCA	98	37.466	FBgn0025630	Rtca	98	37.466	Drosophila_melanogaster
ENSPPAG00000035119	RTCA	96	52.055	ENSEBUG00000008556	rtca	97	52.055	Eptatretus_burgeri
ENSPPAG00000035119	RTCA	100	94.498	ENSEASG00005015926	RTCA	100	91.293	Equus_asinus_asinus
ENSPPAG00000035119	RTCA	100	94.498	ENSECAG00000019831	RTCA	100	91.293	Equus_caballus
ENSPPAG00000035119	RTCA	89	84.420	ENSEEUG00000001165	RTCA	100	82.370	Erinaceus_europaeus
ENSPPAG00000035119	RTCA	100	70.227	ENSELUG00000003741	rtca	99	69.251	Esox_lucius
ENSPPAG00000035119	RTCA	100	94.822	ENSFCAG00000024460	RTCA	100	91.645	Felis_catus
ENSPPAG00000035119	RTCA	89	84.058	ENSFALG00000002443	RTCA	90	80.925	Ficedula_albicollis
ENSPPAG00000035119	RTCA	98	74.426	ENSFDAG00000016084	-	100	72.000	Fukomys_damarensis
ENSPPAG00000035119	RTCA	100	95.469	ENSFDAG00000012070	-	100	91.821	Fukomys_damarensis
ENSPPAG00000035119	RTCA	68	70.142	ENSFHEG00000002868	rtca	90	70.192	Fundulus_heteroclitus
ENSPPAG00000035119	RTCA	100	68.285	ENSGMOG00000013264	rtca	100	65.963	Gadus_morhua
ENSPPAG00000035119	RTCA	100	82.201	ENSGALG00000005277	RTCA	100	80.211	Gallus_gallus
ENSPPAG00000035119	RTCA	100	70.874	ENSGAFG00000011853	rtca	99	68.338	Gambusia_affinis
ENSPPAG00000035119	RTCA	100	67.961	ENSGACG00000013497	rtca	100	66.227	Gasterosteus_aculeatus
ENSPPAG00000035119	RTCA	81	81.046	ENSGAGG00000023306	RTCA	100	81.046	Gopherus_agassizii
ENSPPAG00000035119	RTCA	100	98.058	ENSGGOG00000044018	-	100	94.723	Gorilla_gorilla
ENSPPAG00000035119	RTCA	100	99.029	ENSGGOG00000009546	-	100	99.029	Gorilla_gorilla
ENSPPAG00000035119	RTCA	100	69.579	ENSHBUG00000002114	rtca	99	67.282	Haplochromis_burtoni
ENSPPAG00000035119	RTCA	100	93.528	ENSHGLG00000002617	RTCA	100	90.501	Heterocephalus_glaber_female
ENSPPAG00000035119	RTCA	100	93.528	ENSHGLG00100006056	RTCA	100	90.501	Heterocephalus_glaber_male
ENSPPAG00000035119	RTCA	100	63.754	ENSHCOG00000020628	rtca	89	62.533	Hippocampus_comes
ENSPPAG00000035119	RTCA	100	72.492	ENSIPUG00000024803	rtca	100	70.449	Ictalurus_punctatus
ENSPPAG00000035119	RTCA	100	84.142	ENSSTOG00000033099	-	100	80.263	Ictidomys_tridecemlineatus
ENSPPAG00000035119	RTCA	100	94.822	ENSSTOG00000013528	-	91	94.822	Ictidomys_tridecemlineatus
ENSPPAG00000035119	RTCA	100	64.380	ENSJJAG00000016178	Rtca	100	64.380	Jaculus_jaculus
ENSPPAG00000035119	RTCA	100	70.550	ENSKMAG00000006651	rtca	98	68.984	Kryptolebias_marmoratus
ENSPPAG00000035119	RTCA	100	67.638	ENSLBEG00000028971	rtca	99	66.310	Labrus_bergylta
ENSPPAG00000035119	RTCA	100	67.638	ENSLBEG00000002448	-	98	68.239	Labrus_bergylta
ENSPPAG00000035119	RTCA	100	79.288	ENSLACG00000013666	RTCA	100	75.462	Latimeria_chalumnae
ENSPPAG00000035119	RTCA	100	72.492	ENSLOCG00000000093	rtca	99	70.449	Lepisosteus_oculatus
ENSPPAG00000035119	RTCA	100	92.880	ENSLAFG00000001473	RTCA	100	89.710	Loxodonta_africana
ENSPPAG00000035119	RTCA	100	98.417	ENSMFAG00000034132	RTCA	100	98.417	Macaca_fascicularis
ENSPPAG00000035119	RTCA	100	97.889	ENSMMUG00000019105	RTCA	100	97.889	Macaca_mulatta
ENSPPAG00000035119	RTCA	100	98.382	ENSMNEG00000037163	RTCA	100	98.382	Macaca_nemestrina
ENSPPAG00000035119	RTCA	100	81.003	ENSMLEG00000042151	RTCA	100	81.003	Mandrillus_leucophaeus
ENSPPAG00000035119	RTCA	100	72.492	ENSMAMG00000016536	rtca	100	69.921	Mastacembelus_armatus
ENSPPAG00000035119	RTCA	100	69.903	ENSMZEG00005017945	rtca	99	67.546	Maylandia_zebra
ENSPPAG00000035119	RTCA	100	81.230	ENSMGAG00000006892	RTCA	100	81.250	Meleagris_gallopavo
ENSPPAG00000035119	RTCA	100	91.262	ENSMAUG00000008488	Rtca	100	88.654	Mesocricetus_auratus
ENSPPAG00000035119	RTCA	100	95.793	ENSMICG00000008643	RTCA	100	95.793	Microcebus_murinus
ENSPPAG00000035119	RTCA	100	91.909	ENSMOCG00000016660	Rtca	100	88.918	Microtus_ochrogaster
ENSPPAG00000035119	RTCA	100	70.550	ENSMMOG00000007750	rtca	100	70.550	Mola_mola
ENSPPAG00000035119	RTCA	100	89.968	ENSMODG00000003557	RTCA	100	87.335	Monodelphis_domestica
ENSPPAG00000035119	RTCA	100	71.845	ENSMALG00000020844	rtca	100	69.393	Monopterus_albus
ENSPPAG00000035119	RTCA	100	91.262	MGP_CAROLIEiJ_G0025565	Rtca	100	90.845	Mus_caroli
ENSPPAG00000035119	RTCA	100	90.615	ENSMUSG00000000339	Rtca	100	90.845	Mus_musculus
ENSPPAG00000035119	RTCA	100	90.939	MGP_PahariEiJ_G0027011	Rtca	100	90.141	Mus_pahari
ENSPPAG00000035119	RTCA	100	90.939	MGP_SPRETEiJ_G0026515	Rtca	100	90.141	Mus_spretus
ENSPPAG00000035119	RTCA	100	95.469	ENSMPUG00000012119	RTCA	100	91.821	Mustela_putorius_furo
ENSPPAG00000035119	RTCA	100	88.026	ENSMLUG00000009922	RTCA	100	84.211	Myotis_lucifugus
ENSPPAG00000035119	RTCA	100	91.586	ENSNGAG00000011540	Rtca	99	88.918	Nannospalax_galili
ENSPPAG00000035119	RTCA	100	69.903	ENSNBRG00000003062	rtca	99	67.546	Neolamprologus_brichardi
ENSPPAG00000035119	RTCA	100	99.029	ENSNLEG00000031426	RTCA	100	98.945	Nomascus_leucogenys
ENSPPAG00000035119	RTCA	77	72.727	ENSMEUG00000010030	-	77	72.727	Notamacropus_eugenii
ENSPPAG00000035119	RTCA	87	88.104	ENSOPRG00000012092	RTCA	71	88.104	Ochotona_princeps
ENSPPAG00000035119	RTCA	100	94.175	ENSODEG00000006990	RTCA	96	90.934	Octodon_degus
ENSPPAG00000035119	RTCA	100	69.579	ENSONIG00000007753	rtca	99	67.282	Oreochromis_niloticus
ENSPPAG00000035119	RTCA	100	86.408	ENSOANG00000012055	RTCA	99	84.242	Ornithorhynchus_anatinus
ENSPPAG00000035119	RTCA	100	95.469	ENSOCUG00000014247	RTCA	100	91.821	Oryctolagus_cuniculus
ENSPPAG00000035119	RTCA	100	69.579	ENSORLG00000013605	rtca	100	67.546	Oryzias_latipes
ENSPPAG00000035119	RTCA	100	69.579	ENSORLG00020001904	rtca	100	67.546	Oryzias_latipes_hni
ENSPPAG00000035119	RTCA	100	69.579	ENSORLG00015021064	rtca	100	67.546	Oryzias_latipes_hsok
ENSPPAG00000035119	RTCA	100	70.874	ENSOMEG00000000756	rtca	100	68.338	Oryzias_melastigma
ENSPPAG00000035119	RTCA	99	85.714	ENSOGAG00000005627	RTCA	100	81.794	Otolemur_garnettii
ENSPPAG00000035119	RTCA	100	94.175	ENSOARG00000018122	RTCA	100	94.340	Ovis_aries
ENSPPAG00000035119	RTCA	100	94.822	ENSPPRG00000000350	RTCA	100	91.645	Panthera_pardus
ENSPPAG00000035119	RTCA	100	94.498	ENSPTIG00000012816	RTCA	100	91.384	Panthera_tigris_altaica
ENSPPAG00000035119	RTCA	100	99.472	ENSPTRG00000001004	RTCA	100	99.472	Pan_troglodytes
ENSPPAG00000035119	RTCA	100	97.735	ENSPANG00000000346	RTCA	100	94.195	Papio_anubis
ENSPPAG00000035119	RTCA	100	73.463	ENSPKIG00000001653	rtca	100	70.976	Paramormyrops_kingsleyae
ENSPPAG00000035119	RTCA	100	83.819	ENSPSIG00000011408	RTCA	100	81.266	Pelodiscus_sinensis
ENSPPAG00000035119	RTCA	100	90.939	ENSPEMG00000018582	Rtca	100	88.127	Peromyscus_maniculatus_bairdii
ENSPPAG00000035119	RTCA	99	57.605	ENSPMAG00000009110	rtca	100	56.579	Petromyzon_marinus
ENSPPAG00000035119	RTCA	100	90.291	ENSPCIG00000007684	RTCA	100	87.599	Phascolarctos_cinereus
ENSPPAG00000035119	RTCA	100	71.521	ENSPFOG00000004824	rtca	100	69.129	Poecilia_formosa
ENSPPAG00000035119	RTCA	100	71.521	ENSPLAG00000011753	rtca	99	68.865	Poecilia_latipinna
ENSPPAG00000035119	RTCA	100	71.521	ENSPMEG00000020469	rtca	99	68.865	Poecilia_mexicana
ENSPPAG00000035119	RTCA	100	72.492	ENSPREG00000001365	rtca	99	69.657	Poecilia_reticulata
ENSPPAG00000035119	RTCA	100	98.706	ENSPPYG00000001115	RTCA	100	95.251	Pongo_abelii
ENSPPAG00000035119	RTCA	100	89.968	ENSPCAG00000005076	RTCA	100	87.071	Procavia_capensis
ENSPPAG00000035119	RTCA	100	96.440	ENSPCOG00000005603	RTCA	100	92.876	Propithecus_coquereli
ENSPPAG00000035119	RTCA	100	93.204	ENSPVAG00000009478	RTCA	100	92.876	Pteropus_vampyrus
ENSPPAG00000035119	RTCA	100	69.903	ENSPNYG00000004722	rtca	99	67.546	Pundamilia_nyererei
ENSPPAG00000035119	RTCA	100	73.463	ENSPNAG00000022270	rtca	100	70.712	Pygocentrus_nattereri
ENSPPAG00000035119	RTCA	100	90.939	ENSRNOG00000014575	Rtca	100	88.127	Rattus_norvegicus
ENSPPAG00000035119	RTCA	100	97.625	ENSRBIG00000041180	RTCA	100	97.625	Rhinopithecus_bieti
ENSPPAG00000035119	RTCA	100	97.625	ENSRROG00000024929	RTCA	100	97.625	Rhinopithecus_roxellana
ENSPPAG00000035119	RTCA	100	96.764	ENSSBOG00000028626	RTCA	100	95.515	Saimiri_boliviensis_boliviensis
ENSPPAG00000035119	RTCA	100	89.968	ENSSHAG00000001758	RTCA	100	87.335	Sarcophilus_harrisii
ENSPPAG00000035119	RTCA	100	67.961	ENSSMAG00000014680	rtca	97	66.220	Scophthalmus_maximus
ENSPPAG00000035119	RTCA	100	70.550	ENSSDUG00000015585	rtca	97	68.365	Seriola_dumerili
ENSPPAG00000035119	RTCA	100	70.227	ENSSLDG00000018985	rtca	95	68.407	Seriola_lalandi_dorsalis
ENSPPAG00000035119	RTCA	100	86.084	ENSSARG00000013993	RTCA	100	86.435	Sorex_araneus
ENSPPAG00000035119	RTCA	51	79.618	ENSSPUG00000016255	-	100	79.618	Sphenodon_punctatus
ENSPPAG00000035119	RTCA	100	69.579	ENSSPAG00000011938	rtca	99	67.282	Stegastes_partitus
ENSPPAG00000035119	RTCA	100	94.175	ENSSSCG00000006865	RTCA	100	91.293	Sus_scrofa
ENSPPAG00000035119	RTCA	100	83.172	ENSTGUG00000005154	RTCA	100	80.739	Taeniopygia_guttata
ENSPPAG00000035119	RTCA	100	70.227	ENSTRUG00000008799	rtca	100	67.810	Takifugu_rubripes
ENSPPAG00000035119	RTCA	100	69.903	ENSTNIG00000004725	rtca	100	68.338	Tetraodon_nigroviridis
ENSPPAG00000035119	RTCA	51	100.000	ENSTBEG00000000943	RTCA	82	66.387	Tupaia_belangeri
ENSPPAG00000035119	RTCA	100	93.404	ENSTTRG00000015327	RTCA	100	93.404	Tursiops_truncatus
ENSPPAG00000035119	RTCA	93	91.958	ENSUAMG00000017265	RTCA	96	89.326	Ursus_americanus
ENSPPAG00000035119	RTCA	100	94.175	ENSUMAG00000007881	RTCA	100	91.293	Ursus_maritimus
ENSPPAG00000035119	RTCA	100	85.113	ENSVPAG00000001039	RTCA	87	85.152	Vicugna_pacos
ENSPPAG00000035119	RTCA	100	95.146	ENSVVUG00000022041	RTCA	68	91.821	Vulpes_vulpes
ENSPPAG00000035119	RTCA	99	63.421	ENSXETG00000031661	RTCA	99	63.421	Xenopus_tropicalis
ENSPPAG00000035119	RTCA	100	60.518	ENSXCOG00000008002	rtca	100	59.894	Xiphophorus_couchianus
ENSPPAG00000035119	RTCA	100	71.197	ENSXMAG00000005482	rtca	99	68.602	Xiphophorus_maculatus