EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000035431 (Gene tree)
Gene ID: 100983354
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Minus strand
Length: 20423 bases
Position: chr12:33168254-33188676
Accession: 100983354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000024608	MMR_HSR1	PF01926.23	0.00022	1	1
ENSPPAP00000024619	MMR_HSR1	PF01926.23	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000047433	RAB5B-201	3457	XM_003824952	ENSPPAP00000024608	215 (aa)	XP_003825000	A0A2R9B4V1
ENSPPAT00000047444	RAB5B-202	672	-	ENSPPAP00000024619	223 (aa)	-	A0A2R9BBR7
ENSPPAT00000047448	RAB5B-203	525	-	ENSPPAP00000024623	174 (aa)	-	A0A2R9B4W7
ENSPPAT00000047449	RAB5B-204	222	-	ENSPPAP00000024624	73 (aa)	-	A0A2R9BBR9

Gene Model

Click here to download ENSPPAG00000035431's gene model file

Pathways

Pathway ID	Pathway Name	Source
pps04014	Ras signaling pathway	KEGG
pps04144	Endocytosis	KEGG
pps04145	Phagosome	KEGG
pps04962	Vasopressin-regulated water reabsorption	KEGG
pps05146	Amoebiasis	KEGG
pps05152	Tuberculosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000035431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000035431	RAB5B	89	36.979	ENSPPAG00000028435	-	95	36.979
ENSPPAG00000035431	RAB5B	77	45.783	ENSPPAG00000042439	RAB6B	80	45.783
ENSPPAG00000035431	RAB5B	75	47.205	ENSPPAG00000030195	-	75	47.205
ENSPPAG00000035431	RAB5B	84	43.646	ENSPPAG00000011436	RAB6A	85	43.646
ENSPPAG00000035431	RAB5B	90	43.367	ENSPPAG00000030253	RAB1A	96	43.367
ENSPPAG00000035431	RAB5B	76	32.727	ENSPPAG00000038418	KRAS	90	31.579
ENSPPAG00000035431	RAB5B	74	38.125	ENSPPAG00000010023	RAB23	67	38.125
ENSPPAG00000035431	RAB5B	79	35.673	ENSPPAG00000009152	RAB12	81	35.673
ENSPPAG00000035431	RAB5B	97	86.124	ENSPPAG00000037206	RAB5C	97	86.124
ENSPPAG00000035431	RAB5B	75	45.963	ENSPPAG00000031127	RAB25	76	45.963
ENSPPAG00000035431	RAB5B	93	35.294	ENSPPAG00000024656	RAB9A	99	35.294
ENSPPAG00000035431	RAB5B	90	47.938	ENSPPAG00000030833	RAB22A	98	47.938
ENSPPAG00000035431	RAB5B	55	30.159	ENSPPAG00000022226	ARL4A	60	30.159
ENSPPAG00000035431	RAB5B	83	30.556	ENSPPAG00000037915	NRAS	94	32.143
ENSPPAG00000035431	RAB5B	78	31.765	ENSPPAG00000004422	RERG	84	31.765
ENSPPAG00000035431	RAB5B	82	33.333	ENSPPAG00000031857	-	93	33.333
ENSPPAG00000035431	RAB5B	90	34.826	ENSPPAG00000002892	RAB9B	97	34.826
ENSPPAG00000035431	RAB5B	75	39.130	ENSPPAG00000031759	RAB14	75	39.130
ENSPPAG00000035431	RAB5B	83	37.705	ENSPPAG00000038245	RAB33A	77	37.705
ENSPPAG00000035431	RAB5B	62	30.986	ENSPPAG00000043156	ARL8B	73	30.986
ENSPPAG00000035431	RAB5B	62	30.282	ENSPPAG00000031562	ARL8A	73	30.282
ENSPPAG00000035431	RAB5B	78	35.882	ENSPPAG00000041186	RAB39B	80	35.882
ENSPPAG00000035431	RAB5B	78	42.857	ENSPPAG00000031604	RAB30	83	42.857
ENSPPAG00000035431	RAB5B	100	81.481	ENSPPAG00000041763	RAB5A	100	81.481
ENSPPAG00000035431	RAB5B	82	32.787	ENSPPAG00000028620	HRAS	96	32.787
ENSPPAG00000035431	RAB5B	83	39.130	ENSPPAG00000043376	RAB33B	79	39.344
ENSPPAG00000035431	RAB5B	86	41.304	ENSPPAG00000035840	RAB2B	85	41.304
ENSPPAG00000035431	RAB5B	80	42.222	ENSPPAG00000041625	RAB18	94	39.086
ENSPPAG00000035431	RAB5B	82	45.198	ENSPPAG00000041445	RAB1B	87	45.198
ENSPPAG00000035431	RAB5B	91	31.122	ENSPPAG00000033987	-	98	31.122
ENSPPAG00000035431	RAB5B	91	43.689	ENSPPAG00000028589	-	94	43.689

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000035431	RAB5B	100	100.000	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSPPAG00000035431	RAB5B	100	98.618	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSPPAG00000035431	RAB5B	100	96.279	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
ENSPPAG00000035431	RAB5B	100	100.000	ENSANAG00000033215	RAB5B	95	100.000	Aotus_nancymaae
ENSPPAG00000035431	RAB5B	100	99.535	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSPPAG00000035431	RAB5B	100	100.000	ENSCJAG00000041780	RAB5B	95	100.000	Callithrix_jacchus
ENSPPAG00000035431	RAB5B	100	100.000	ENSCAFG00000000087	RAB5B	100	100.000	Canis_familiaris
ENSPPAG00000035431	RAB5B	100	100.000	ENSCAFG00020026094	RAB5B	100	100.000	Canis_lupus_dingo
ENSPPAG00000035431	RAB5B	97	100.000	ENSCHIG00000010333	RAB5B	96	100.000	Capra_hircus
ENSPPAG00000035431	RAB5B	100	99.535	ENSTSYG00000009576	RAB5B	100	99.535	Carlito_syrichta
ENSPPAG00000035431	RAB5B	100	100.000	ENSCPOG00000034818	RAB5B	100	100.000	Cavia_porcellus
ENSPPAG00000035431	RAB5B	100	99.070	ENSCCAG00000019480	RAB5B	100	99.070	Cebus_capucinus
ENSPPAG00000035431	RAB5B	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSPPAG00000035431	RAB5B	100	99.070	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSPPAG00000035431	RAB5B	100	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSPPAG00000035431	RAB5B	100	99.535	ENSCGRG00001000428	Rab5b	100	99.535	Cricetulus_griseus_chok1gshd
ENSPPAG00000035431	RAB5B	100	99.535	ENSCGRG00000009508	-	100	99.535	Cricetulus_griseus_crigri
ENSPPAG00000035431	RAB5B	100	100.000	ENSDORG00000025063	Rab5b	100	100.000	Dipodomys_ordii
ENSPPAG00000035431	RAB5B	100	99.535	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
ENSPPAG00000035431	RAB5B	100	99.070	ENSEEUG00000006745	RAB5B	100	99.070	Erinaceus_europaeus
ENSPPAG00000035431	RAB5B	100	100.000	ENSFDAG00000008326	RAB5B	100	100.000	Fukomys_damarensis
ENSPPAG00000035431	RAB5B	100	99.070	ENSHGLG00000005995	RAB5B	100	99.070	Heterocephalus_glaber_female
ENSPPAG00000035431	RAB5B	100	99.070	ENSHGLG00100012955	RAB5B	100	99.070	Heterocephalus_glaber_male
ENSPPAG00000035431	RAB5B	100	98.605	ENSSTOG00000010536	RAB5B	100	98.605	Ictidomys_tridecemlineatus
ENSPPAG00000035431	RAB5B	100	99.535	ENSJJAG00000019506	Rab5b	100	99.535	Jaculus_jaculus
ENSPPAG00000035431	RAB5B	100	99.078	ENSLAFG00000018009	RAB5B	95	99.078	Loxodonta_africana
ENSPPAG00000035431	RAB5B	100	99.070	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSPPAG00000035431	RAB5B	100	99.070	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSPPAG00000035431	RAB5B	100	99.070	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSPPAG00000035431	RAB5B	100	99.070	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSPPAG00000035431	RAB5B	100	100.000	ENSMAUG00000011613	Rab5b	100	100.000	Mesocricetus_auratus
ENSPPAG00000035431	RAB5B	100	99.535	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSPPAG00000035431	RAB5B	100	100.000	ENSMUSG00000000711	Rab5b	100	100.000	Mus_musculus
ENSPPAG00000035431	RAB5B	100	100.000	MGP_PahariEiJ_G0031135	Rab5b	100	100.000	Mus_pahari
ENSPPAG00000035431	RAB5B	100	99.535	MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	Mus_spretus
ENSPPAG00000035431	RAB5B	99	98.611	ENSMPUG00000000946	RAB5B	89	98.611	Mustela_putorius_furo
ENSPPAG00000035431	RAB5B	100	100.000	ENSNLEG00000017570	-	100	100.000	Nomascus_leucogenys
ENSPPAG00000035431	RAB5B	100	100.000	ENSOPRG00000007883	RAB5B	100	100.000	Ochotona_princeps
ENSPPAG00000035431	RAB5B	100	99.535	ENSODEG00000003860	RAB5B	100	99.535	Octodon_degus
ENSPPAG00000035431	RAB5B	100	100.000	ENSOCUG00000013895	RAB5B	95	100.000	Oryctolagus_cuniculus
ENSPPAG00000035431	RAB5B	100	100.000	ENSOARG00000010651	RAB5B	95	100.000	Ovis_aries
ENSPPAG00000035431	RAB5B	100	100.000	ENSPTRG00000005071	RAB5B	100	100.000	Pan_troglodytes
ENSPPAG00000035431	RAB5B	99	98.131	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSPPAG00000035431	RAB5B	100	100.000	ENSPCOG00000016461	RAB5B	100	100.000	Propithecus_coquereli
ENSPPAG00000035431	RAB5B	100	99.070	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
ENSPPAG00000035431	RAB5B	100	99.070	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSPPAG00000035431	RAB5B	100	99.070	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSPPAG00000035431	RAB5B	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSPPAG00000035431	RAB5B	100	98.605	ENSSHAG00000007727	RAB5B	100	98.605	Sarcophilus_harrisii
ENSPPAG00000035431	RAB5B	100	100.000	ENSSARG00000006237	RAB5B	100	100.000	Sorex_araneus
ENSPPAG00000035431	RAB5B	100	96.279	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
ENSPPAG00000035431	RAB5B	100	100.000	ENSTTRG00000015001	RAB5B	100	100.000	Tursiops_truncatus
ENSPPAG00000035431	RAB5B	100	99.535	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSPPAG00000035431	RAB5B	100	99.535	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSPPAG00000035431	RAB5B	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes