EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000036116 (Gene tree)
Gene ID: -
Gene Symbol: PCBP1
Alias: -
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 3328 bases
Position: chr2A:71258331-71261658
Accession: 8647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000025986	KH_1	PF00013.29	2.3e-51	1	3
ENSPPAP00000025986	KH_1	PF00013.29	2.3e-51	2	3
ENSPPAP00000025986	KH_1	PF00013.29	2.3e-51	3	3
ENSPPAP00000025989	KH_1	PF00013.29	2.4e-51	1	3
ENSPPAP00000025989	KH_1	PF00013.29	2.4e-51	2	3
ENSPPAP00000025989	KH_1	PF00013.29	2.4e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000048821	PCBP1-202	1083	-	ENSPPAP00000025989	360 (aa)	-	A0A2R9B8S3
ENSPPAT00000048817	PCBP1-201	1080	-	ENSPPAP00000025986	359 (aa)	-	A0A2R9BCG6

Gene Model

Click here to download ENSPPAG00000036116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000036116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000036116	PCBP1	97	80.223	ENSPPAG00000027632	PCBP2	98	80.223
ENSPPAG00000036116	PCBP1	55	32.143	ENSPPAG00000034539	IGF2BP2	81	32.143
ENSPPAG00000036116	PCBP1	70	34.667	ENSPPAG00000036395	-	64	34.667
ENSPPAG00000036116	PCBP1	70	34.667	ENSPPAG00000036398	-	60	34.667
ENSPPAG00000036116	PCBP1	55	30.909	ENSPPAG00000038959	-	52	30.909
ENSPPAG00000036116	PCBP1	98	66.391	ENSPPAG00000021940	PCBP3	91	66.391
ENSPPAG00000036116	PCBP1	95	52.616	ENSPPAG00000038764	PCBP4	80	50.000
ENSPPAG00000036116	PCBP1	71	40.541	ENSPPAG00000038980	NOVA1	62	40.541
ENSPPAG00000036116	PCBP1	64	30.539	ENSPPAG00000011103	FUBP3	76	30.830
ENSPPAG00000036116	PCBP1	99	70.112	ENSPPAG00000040128	-	100	70.112
ENSPPAG00000036116	PCBP1	86	38.710	ENSPPAG00000032080	-	57	46.774

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000036116	PCBP1	99	98.599	ENSG00000169564	PCBP1	100	98.034	Homo_sapiens
ENSPPAG00000036116	PCBP1	99	95.798	ENSAMEG00000016094	PCBP1	100	95.225	Ailuropoda_melanoleuca
ENSPPAG00000036116	PCBP1	94	96.165	ENSANAG00000026989	-	97	96.165	Aotus_nancymaae
ENSPPAG00000036116	PCBP1	99	84.831	ENSANAG00000033377	-	100	84.831	Aotus_nancymaae
ENSPPAG00000036116	PCBP1	79	95.053	ENSANAG00000031745	-	100	95.053	Aotus_nancymaae
ENSPPAG00000036116	PCBP1	99	86.835	ENSANAG00000026077	-	100	86.236	Aotus_nancymaae
ENSPPAG00000036116	PCBP1	79	91.873	ENSANAG00000022494	-	100	91.873	Aotus_nancymaae
ENSPPAG00000036116	PCBP1	99	87.675	ENSANAG00000023938	-	100	87.079	Aotus_nancymaae
ENSPPAG00000036116	PCBP1	88	87.658	ENSANAG00000027108	-	100	87.658	Aotus_nancymaae
ENSPPAG00000036116	PCBP1	79	95.053	ENSANAG00000019364	-	100	95.053	Aotus_nancymaae
ENSPPAG00000036116	PCBP1	91	98.462	ENSBTAG00000008985	PCBP1	99	97.840	Bos_taurus
ENSPPAG00000036116	PCBP1	99	92.997	ENSCJAG00000038388	-	95	92.416	Callithrix_jacchus
ENSPPAG00000036116	PCBP1	99	98.319	ENSCAFG00000003326	PCBP1	100	97.753	Canis_familiaris
ENSPPAG00000036116	PCBP1	99	98.599	ENSCHIG00000007923	PCBP1	100	98.034	Capra_hircus
ENSPPAG00000036116	PCBP1	99	98.039	ENSTSYG00000027848	PCBP1	100	97.472	Carlito_syrichta
ENSPPAG00000036116	PCBP1	99	98.599	ENSCPOG00000013511	PCBP1	100	98.034	Cavia_porcellus
ENSPPAG00000036116	PCBP1	99	89.916	ENSCCAG00000029186	-	98	89.577	Cebus_capucinus
ENSPPAG00000036116	PCBP1	99	98.599	ENSCCAG00000019842	-	100	98.034	Cebus_capucinus
ENSPPAG00000036116	PCBP1	99	98.599	ENSCATG00000015029	PCBP1	100	98.034	Cercocebus_atys
ENSPPAG00000036116	PCBP1	99	98.039	ENSCLAG00000017909	PCBP1	100	97.472	Chinchilla_lanigera
ENSPPAG00000036116	PCBP1	99	98.599	ENSCSAG00000019441	PCBP1	100	98.034	Chlorocebus_sabaeus
ENSPPAG00000036116	PCBP1	71	84.706	ENSCANG00000033810	-	87	84.706	Colobus_angolensis_palliatus
ENSPPAG00000036116	PCBP1	99	88.515	ENSCANG00000032470	-	94	88.515	Colobus_angolensis_palliatus
ENSPPAG00000036116	PCBP1	99	98.599	ENSCANG00000018039	-	100	98.034	Colobus_angolensis_palliatus
ENSPPAG00000036116	PCBP1	99	98.599	ENSCGRG00001015078	Pcbp1	100	98.034	Cricetulus_griseus_chok1gshd
ENSPPAG00000036116	PCBP1	99	98.599	ENSCGRG00000018899	Pcbp1	100	98.034	Cricetulus_griseus_crigri
ENSPPAG00000036116	PCBP1	79	99.298	ENSDNOG00000036372	PCBP1	99	99.298	Dasypus_novemcinctus
ENSPPAG00000036116	PCBP1	99	98.599	ENSDORG00000008216	Pcbp1	100	98.034	Dipodomys_ordii
ENSPPAG00000036116	PCBP1	99	98.599	ENSFCAG00000022238	PCBP1	100	98.034	Felis_catus
ENSPPAG00000036116	PCBP1	99	98.599	ENSFDAG00000019637	PCBP1	98	100.000	Fukomys_damarensis
ENSPPAG00000036116	PCBP1	99	98.599	ENSGGOG00000028130	PCBP1	100	98.034	Gorilla_gorilla
ENSPPAG00000036116	PCBP1	99	98.599	ENSHGLG00000020345	Pcbp1	98	100.000	Heterocephalus_glaber_female
ENSPPAG00000036116	PCBP1	99	96.639	ENSHGLG00000020243	-	98	97.989	Heterocephalus_glaber_female
ENSPPAG00000036116	PCBP1	99	98.319	ENSHGLG00100019620	-	98	99.713	Heterocephalus_glaber_male
ENSPPAG00000036116	PCBP1	99	98.599	ENSHGLG00100019761	Pcbp1	98	100.000	Heterocephalus_glaber_male
ENSPPAG00000036116	PCBP1	99	98.599	ENSSTOG00000026002	PCBP1	100	98.034	Ictidomys_tridecemlineatus
ENSPPAG00000036116	PCBP1	99	98.599	ENSJJAG00000000737	Pcbp1	100	98.034	Jaculus_jaculus
ENSPPAG00000036116	PCBP1	94	88.427	ENSMFAG00000003400	PCBP1	100	88.427	Macaca_fascicularis
ENSPPAG00000036116	PCBP1	99	98.599	ENSMMUG00000038295	PCBP1	100	98.034	Macaca_mulatta
ENSPPAG00000036116	PCBP1	99	98.599	ENSMNEG00000002934	PCBP1	100	98.034	Macaca_nemestrina
ENSPPAG00000036116	PCBP1	99	98.599	ENSMLEG00000027389	PCBP1	100	98.034	Mandrillus_leucophaeus
ENSPPAG00000036116	PCBP1	99	98.319	ENSMAUG00000009843	Pcbp1	100	97.753	Mesocricetus_auratus
ENSPPAG00000036116	PCBP1	99	98.599	ENSMICG00000038221	PCBP1	100	98.034	Microcebus_murinus
ENSPPAG00000036116	PCBP1	99	98.599	ENSMOCG00000008102	Pcbp1	100	98.034	Microtus_ochrogaster
ENSPPAG00000036116	PCBP1	99	98.599	MGP_CAROLIEiJ_G0028598	Pcbp1	100	98.034	Mus_caroli
ENSPPAG00000036116	PCBP1	99	98.599	ENSMUSG00000051695	Pcbp1	100	98.034	Mus_musculus
ENSPPAG00000036116	PCBP1	99	98.599	MGP_PahariEiJ_G0022335	Pcbp1	100	98.034	Mus_pahari
ENSPPAG00000036116	PCBP1	99	98.599	MGP_SPRETEiJ_G0029609	Pcbp1	100	98.034	Mus_spretus
ENSPPAG00000036116	PCBP1	99	95.798	ENSMPUG00000007175	PCBP1	100	95.225	Mustela_putorius_furo
ENSPPAG00000036116	PCBP1	99	98.599	ENSMLUG00000014173	PCBP1	100	98.034	Myotis_lucifugus
ENSPPAG00000036116	PCBP1	99	98.599	ENSNGAG00000011957	-	100	98.034	Nannospalax_galili
ENSPPAG00000036116	PCBP1	99	98.599	ENSNGAG00000014909	-	100	98.034	Nannospalax_galili
ENSPPAG00000036116	PCBP1	99	98.599	ENSNLEG00000018722	PCBP1	100	98.034	Nomascus_leucogenys
ENSPPAG00000036116	PCBP1	99	82.353	ENSODEG00000000263	PCBP1	100	81.742	Octodon_degus
ENSPPAG00000036116	PCBP1	99	98.599	ENSOCUG00000003634	PCBP1	100	98.034	Oryctolagus_cuniculus
ENSPPAG00000036116	PCBP1	99	95.798	ENSOGAG00000028946	PCBP1	100	95.225	Otolemur_garnettii
ENSPPAG00000036116	PCBP1	99	98.599	ENSOARG00000019516	PCBP1	100	98.034	Ovis_aries
ENSPPAG00000036116	PCBP1	99	98.599	ENSPPRG00000020533	PCBP1	100	98.034	Panthera_pardus
ENSPPAG00000036116	PCBP1	99	98.599	ENSPTIG00000007318	PCBP1	100	98.034	Panthera_tigris_altaica
ENSPPAG00000036116	PCBP1	99	98.599	ENSPTRG00000012025	PCBP1	100	98.034	Pan_troglodytes
ENSPPAG00000036116	PCBP1	99	98.599	ENSPANG00000011314	PCBP1	100	98.034	Papio_anubis
ENSPPAG00000036116	PCBP1	99	98.599	ENSPPYG00000012328	PCBP1	100	98.034	Pongo_abelii
ENSPPAG00000036116	PCBP1	99	98.599	ENSPCOG00000026934	PCBP1	100	98.034	Propithecus_coquereli
ENSPPAG00000036116	PCBP1	99	97.759	ENSRROG00000009684	-	95	97.191	Rhinopithecus_roxellana
ENSPPAG00000036116	PCBP1	93	97.297	ENSRROG00000012514	-	100	96.687	Rhinopithecus_roxellana
ENSPPAG00000036116	PCBP1	99	81.742	ENSSBOG00000035309	-	94	81.742	Saimiri_boliviensis_boliviensis
ENSPPAG00000036116	PCBP1	99	98.319	ENSSSCG00000027224	PCBP1	100	97.753	Sus_scrofa
ENSPPAG00000036116	PCBP1	50	100.000	ENSTBEG00000015706	-	51	100.000	Tupaia_belangeri
ENSPPAG00000036116	PCBP1	90	98.148	ENSVVUG00000028033	PCBP1	99	97.523	Vulpes_vulpes