EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPAG00000036238 (Gene tree)
Gene ID: 100985043
Gene Symbol: -
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Pan_paniscus
Status: putative
Strand: Plus strand
Length: 2470609 bases
Position: chr16:5418607-7889215
Accession: 100985043
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPAP00000026554	Fox-1_C	PF12414.8	1e-42	1	1
ENSPPAP00000026546	Fox-1_C	PF12414.8	1.6e-42	1	1
ENSPPAP00000026509	Fox-1_C	PF12414.8	2.7e-40	1	1
ENSPPAP00000026507	Fox-1_C	PF12414.8	2.8e-40	1	1
ENSPPAP00000026499	Fox-1_C	PF12414.8	5.4e-40	1	1
ENSPPAP00000026547	Fox-1_C	PF12414.8	2.9e-38	1	1
ENSPPAP00000026532	Fox-1_C	PF12414.8	5.6e-23	1	1
ENSPPAP00000026547	RRM_1	PF00076.22	3.4e-18	1	1
ENSPPAP00000026554	RRM_1	PF00076.22	4.1e-18	1	1
ENSPPAP00000026532	RRM_1	PF00076.22	4.4e-18	1	1
ENSPPAP00000026546	RRM_1	PF00076.22	4.6e-18	1	1
ENSPPAP00000026499	RRM_1	PF00076.22	8.3e-18	1	1
ENSPPAP00000026507	RRM_1	PF00076.22	8.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPAT00000049381	-	2975	XM_003808315	ENSPPAP00000026547	366 (aa)	XP_003808363	A0A2R9BBQ4
ENSPPAT00000049380	-	3757	XM_003808313	ENSPPAP00000026546	388 (aa)	XP_003808361	A0A2R9BE37
ENSPPAT00000049335	-	606	-	ENSPPAP00000026502	201 (aa)	-	A0A2R9BBL1
ENSPPAT00000049366	-	1140	-	ENSPPAP00000026532	379 (aa)	-	A0A2R9BBP0
ENSPPAT00000049342	-	1143	-	ENSPPAP00000026509	380 (aa)	-	A0A2R9BA77
ENSPPAT00000049340	-	1176	XM_008960401	ENSPPAP00000026507	391 (aa)	-	A0A2R9BBL4
ENSPPAT00000049332	-	1749	XM_003808318	ENSPPAP00000026499	582 (aa)	XP_003808366	A0A2R9BA64
ENSPPAT00000049388	-	2359	XM_003808314	ENSPPAP00000026554	361 (aa)	XP_003808362	A0A2R9BAC3

Gene Model

Click here to download ENSPPAG00000036238's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPAG00000036238's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPAG00000036238	-	70	79.134	ENSPPAG00000025383	RBFOX3	95	78.909
ENSPPAG00000036238	-	100	63.570	ENSPPAG00000035653	RBFOX2	98	63.210

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPAG00000036238	-	100	100.000	ENSG00000078328	RBFOX1	100	100.000	Homo_sapiens
ENSPPAG00000036238	-	100	81.266	ENSAPOG00000003197	rbfox1	98	81.794	Acanthochromis_polyacanthus
ENSPPAG00000036238	-	60	97.685	ENSAMEG00000008605	RBFOX1	90	95.089	Ailuropoda_melanoleuca
ENSPPAG00000036238	-	66	71.375	ENSACIG00000005478	rbfox1	68	71.375	Amphilophus_citrinellus
ENSPPAG00000036238	-	72	78.136	ENSAOCG00000008283	rbfox1	96	77.778	Amphiprion_ocellaris
ENSPPAG00000036238	-	95	74.515	ENSAPEG00000010636	rbfox1	100	74.656	Amphiprion_percula
ENSPPAG00000036238	-	72	76.512	ENSATEG00000007513	rbfox1	96	76.157	Anabas_testudineus
ENSPPAG00000036238	-	100	94.845	ENSAPLG00000013263	RBFOX1	97	94.845	Anas_platyrhynchos
ENSPPAG00000036238	-	100	87.980	ENSACAG00000004013	RBFOX1	98	87.980	Anolis_carolinensis
ENSPPAG00000036238	-	100	99.744	ENSANAG00000029527	RBFOX1	100	99.744	Aotus_nancymaae
ENSPPAG00000036238	-	60	89.815	ENSAMXG00000002431	rbfox1	63	89.815	Astyanax_mexicanus
ENSPPAG00000036238	-	100	98.907	ENSBTAG00000007210	RBFOX1	97	98.907	Bos_taurus
ENSPPAG00000036238	-	100	99.488	ENSCJAG00000017351	RBFOX1	100	99.488	Callithrix_jacchus
ENSPPAG00000036238	-	100	99.727	ENSCAFG00000019082	RBFOX1	93	99.727	Canis_familiaris
ENSPPAG00000036238	-	100	84.973	ENSCAFG00020024881	RBFOX1	92	85.519	Canis_lupus_dingo
ENSPPAG00000036238	-	100	98.907	ENSCHIG00000023549	RBFOX1	97	98.907	Capra_hircus
ENSPPAG00000036238	-	100	99.169	ENSTSYG00000005334	RBFOX1	100	99.169	Carlito_syrichta
ENSPPAG00000036238	-	100	98.196	ENSCAPG00000017669	RBFOX1	100	98.196	Cavia_aperea
ENSPPAG00000036238	-	100	98.196	ENSCPOG00000011314	RBFOX1	99	98.196	Cavia_porcellus
ENSPPAG00000036238	-	100	99.446	ENSCCAG00000023031	RBFOX1	100	99.766	Cebus_capucinus
ENSPPAG00000036238	-	100	100.000	ENSCATG00000033816	RBFOX1	100	100.000	Cercocebus_atys
ENSPPAG00000036238	-	100	98.711	ENSCLAG00000012761	RBFOX1	98	98.711	Chinchilla_lanigera
ENSPPAG00000036238	-	100	97.814	ENSCSAG00000008739	RBFOX1	98	98.919	Chlorocebus_sabaeus
ENSPPAG00000036238	-	81	96.923	ENSCHOG00000012843	RBFOX1	74	96.923	Choloepus_hoffmanni
ENSPPAG00000036238	-	100	95.568	ENSCPBG00000026626	RBFOX1	98	94.054	Chrysemys_picta_bellii
ENSPPAG00000036238	-	100	100.000	ENSCANG00000033125	RBFOX1	100	100.000	Colobus_angolensis_palliatus
ENSPPAG00000036238	-	100	98.196	ENSCGRG00001013729	Rbfox1	98	98.196	Cricetulus_griseus_chok1gshd
ENSPPAG00000036238	-	100	98.196	ENSCGRG00000003272	Rbfox1	98	98.196	Cricetulus_griseus_crigri
ENSPPAG00000036238	-	97	76.216	ENSCSEG00000008840	rbfox1	100	76.216	Cynoglossus_semilaevis
ENSPPAG00000036238	-	100	88.398	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSPPAG00000036238	-	100	98.454	ENSDNOG00000043612	RBFOX1	93	98.454	Dasypus_novemcinctus
ENSPPAG00000036238	-	100	95.908	ENSDORG00000010024	Rbfox1	97	95.908	Dipodomys_ordii
ENSPPAG00000036238	-	100	75.835	ENSETEG00000003771	RBFOX1	93	75.835	Echinops_telfairi
ENSPPAG00000036238	-	100	99.454	ENSEASG00005011599	RBFOX1	97	97.172	Equus_asinus_asinus
ENSPPAG00000036238	-	100	99.180	ENSECAG00000012667	RBFOX1	98	98.108	Equus_caballus
ENSPPAG00000036238	-	100	54.545	ENSELUG00000013096	rbfox1	97	54.270	Esox_lucius
ENSPPAG00000036238	-	100	99.454	ENSFCAG00000025322	RBFOX1	100	99.233	Felis_catus
ENSPPAG00000036238	-	88	92.570	ENSFALG00000004027	RBFOX1	100	92.793	Ficedula_albicollis
ENSPPAG00000036238	-	100	98.711	ENSFDAG00000007388	RBFOX1	98	98.711	Fukomys_damarensis
ENSPPAG00000036238	-	100	92.896	ENSGALG00000034325	RBFOX1	97	94.550	Gallus_gallus
ENSPPAG00000036238	-	100	94.262	ENSGAGG00000023681	RBFOX1	100	94.960	Gopherus_agassizii
ENSPPAG00000036238	-	100	100.000	ENSGGOG00000016871	-	100	100.000	Gorilla_gorilla
ENSPPAG00000036238	-	100	98.454	ENSHGLG00000016944	RBFOX1	98	98.454	Heterocephalus_glaber_female
ENSPPAG00000036238	-	100	98.454	ENSHGLG00100003272	RBFOX1	98	98.454	Heterocephalus_glaber_male
ENSPPAG00000036238	-	86	76.562	ENSHCOG00000016419	rbfox1	91	76.562	Hippocampus_comes
ENSPPAG00000036238	-	97	90.857	ENSIPUG00000015215	rbfox1	100	90.857	Ictalurus_punctatus
ENSPPAG00000036238	-	100	97.938	ENSSTOG00000000322	RBFOX1	98	97.938	Ictidomys_tridecemlineatus
ENSPPAG00000036238	-	100	94.845	ENSJJAG00000002575	Rbfox1	98	94.845	Jaculus_jaculus
ENSPPAG00000036238	-	97	78.474	ENSLBEG00000014659	rbfox1	97	78.474	Labrus_bergylta
ENSPPAG00000036238	-	100	87.468	ENSLOCG00000006675	rbfox1	98	87.468	Lepisosteus_oculatus
ENSPPAG00000036238	-	79	99.026	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSPPAG00000036238	-	100	99.744	ENSMFAG00000036447	RBFOX1	100	99.744	Macaca_fascicularis
ENSPPAG00000036238	-	100	99.744	ENSMMUG00000003458	RBFOX1	100	99.744	Macaca_mulatta
ENSPPAG00000036238	-	100	99.744	ENSMNEG00000032034	RBFOX1	100	99.744	Macaca_nemestrina
ENSPPAG00000036238	-	100	100.000	ENSMLEG00000015382	RBFOX1	100	100.000	Mandrillus_leucophaeus
ENSPPAG00000036238	-	97	80.548	ENSMAMG00000003142	rbfox1	100	81.096	Mastacembelus_armatus
ENSPPAG00000036238	-	77	89.643	ENSMGAG00000008606	RBFOX1	95	89.455	Meleagris_gallopavo
ENSPPAG00000036238	-	99	58.333	ENSMAUG00000020570	Rbfox1	99	57.784	Mesocricetus_auratus
ENSPPAG00000036238	-	100	99.454	ENSMICG00000034286	RBFOX1	100	99.233	Microcebus_murinus
ENSPPAG00000036238	-	100	98.196	ENSMOCG00000020932	Rbfox1	100	98.177	Microtus_ochrogaster
ENSPPAG00000036238	-	88	77.044	ENSMMOG00000009716	rbfox1	86	77.885	Mola_mola
ENSPPAG00000036238	-	97	95.493	ENSMODG00000005826	RBFOX1	100	97.740	Monodelphis_domestica
ENSPPAG00000036238	-	100	82.038	ENSMALG00000003337	rbfox1	98	82.038	Monopterus_albus
ENSPPAG00000036238	-	100	98.454	MGP_CAROLIEiJ_G0020427	Rbfox1	98	98.454	Mus_caroli
ENSPPAG00000036238	-	100	98.196	ENSMUSG00000008658	Rbfox1	100	97.931	Mus_musculus
ENSPPAG00000036238	-	100	98.454	MGP_PahariEiJ_G0016135	Rbfox1	98	98.454	Mus_pahari
ENSPPAG00000036238	-	100	97.938	MGP_SPRETEiJ_G0021321	Rbfox1	98	97.938	Mus_spretus
ENSPPAG00000036238	-	100	96.995	ENSMPUG00000014822	RBFOX1	93	98.638	Mustela_putorius_furo
ENSPPAG00000036238	-	79	99.674	ENSMLUG00000015896	RBFOX1	100	99.674	Myotis_lucifugus
ENSPPAG00000036238	-	100	98.711	ENSNGAG00000023276	Rbfox1	100	98.711	Nannospalax_galili
ENSPPAG00000036238	-	99	62.907	ENSNBRG00000011084	rbfox1	94	62.750	Neolamprologus_brichardi
ENSPPAG00000036238	-	100	99.723	ENSNLEG00000010017	-	100	98.797	Nomascus_leucogenys
ENSPPAG00000036238	-	82	97.131	ENSMEUG00000012525	RBFOX1	93	78.406	Notamacropus_eugenii
ENSPPAG00000036238	-	88	98.148	ENSOPRG00000006199	-	76	98.148	Ochotona_princeps
ENSPPAG00000036238	-	100	97.938	ENSODEG00000013166	RBFOX1	98	97.938	Octodon_degus
ENSPPAG00000036238	-	100	94.536	ENSOANG00000002379	RBFOX1	98	95.676	Ornithorhynchus_anatinus
ENSPPAG00000036238	-	60	97.222	ENSOCUG00000001205	-	100	94.222	Oryctolagus_cuniculus
ENSPPAG00000036238	-	100	99.742	ENSOGAG00000025535	RBFOX1	98	99.742	Otolemur_garnettii
ENSPPAG00000036238	-	66	87.243	ENSOARG00000005135	RBFOX1	99	93.074	Ovis_aries
ENSPPAG00000036238	-	100	99.233	ENSPPRG00000006546	RBFOX1	100	99.233	Panthera_pardus
ENSPPAG00000036238	-	100	87.629	ENSPTIG00000021154	RBFOX1	99	87.634	Panthera_tigris_altaica
ENSPPAG00000036238	-	100	100.000	ENSPTRG00000007744	RBFOX1	100	100.000	Pan_troglodytes
ENSPPAG00000036238	-	100	100.000	ENSPANG00000026500	RBFOX1	100	100.000	Papio_anubis
ENSPPAG00000036238	-	100	89.532	ENSPKIG00000009667	-	95	90.616	Paramormyrops_kingsleyae
ENSPPAG00000036238	-	73	93.156	ENSPKIG00000019353	rbfox1	86	93.156	Paramormyrops_kingsleyae
ENSPPAG00000036238	-	100	94.845	ENSPSIG00000006523	RBFOX1	97	94.845	Pelodiscus_sinensis
ENSPPAG00000036238	-	100	98.454	ENSPEMG00000017607	Rbfox1	98	98.454	Peromyscus_maniculatus_bairdii
ENSPPAG00000036238	-	75	92.759	ENSPCIG00000026887	RBFOX1	100	94.014	Phascolarctos_cinereus
ENSPPAG00000036238	-	100	97.814	ENSPPYG00000007079	-	93	99.455	Pongo_abelii
ENSPPAG00000036238	-	90	87.679	ENSPCAG00000002630	RBFOX1	92	87.679	Procavia_capensis
ENSPPAG00000036238	-	100	99.446	ENSPCOG00000025687	RBFOX1	100	98.977	Propithecus_coquereli
ENSPPAG00000036238	-	100	92.288	ENSPVAG00000013467	RBFOX1	93	92.288	Pteropus_vampyrus
ENSPPAG00000036238	-	97	87.838	ENSPNAG00000023109	rbfox1	100	87.838	Pygocentrus_nattereri
ENSPPAG00000036238	-	100	98.196	ENSRNOG00000002827	Rbfox1	97	98.087	Rattus_norvegicus
ENSPPAG00000036238	-	100	100.000	ENSRBIG00000044478	RBFOX1	100	100.000	Rhinopithecus_bieti
ENSPPAG00000036238	-	100	100.000	ENSRROG00000044411	RBFOX1	100	100.000	Rhinopithecus_roxellana
ENSPPAG00000036238	-	100	99.727	ENSSBOG00000033726	RBFOX1	100	99.488	Saimiri_boliviensis_boliviensis
ENSPPAG00000036238	-	100	93.814	ENSSHAG00000009257	RBFOX1	98	93.814	Sarcophilus_harrisii
ENSPPAG00000036238	-	89	76.292	ENSSFOG00015009955	-	83	76.292	Scleropages_formosus
ENSPPAG00000036238	-	100	77.285	ENSSFOG00015023675	rbfox1	97	77.008	Scleropages_formosus
ENSPPAG00000036238	-	100	82.540	ENSSMAG00000015505	rbfox1	94	80.473	Scophthalmus_maximus
ENSPPAG00000036238	-	100	80.000	ENSSDUG00000016413	rbfox1	99	79.726	Seriola_dumerili
ENSPPAG00000036238	-	86	78.594	ENSSLDG00000009353	rbfox1	95	78.667	Seriola_lalandi_dorsalis
ENSPPAG00000036238	-	86	89.776	ENSSPUG00000009732	RBFOX1	87	89.776	Sphenodon_punctatus
ENSPPAG00000036238	-	100	81.266	ENSSPAG00000009723	rbfox1	100	81.003	Stegastes_partitus
ENSPPAG00000036238	-	100	98.907	ENSSSCG00000007917	RBFOX1	100	98.870	Sus_scrofa
ENSPPAG00000036238	-	100	94.845	ENSTGUG00000004562	RBFOX1	99	94.845	Taeniopygia_guttata
ENSPPAG00000036238	-	100	80.952	ENSTRUG00000020940	rbfox1	99	80.952	Takifugu_rubripes
ENSPPAG00000036238	-	66	62.718	ENSTNIG00000002567	rbfox1	100	64.460	Tetraodon_nigroviridis
ENSPPAG00000036238	-	66	100.000	ENSTBEG00000009169	-	60	100.000	Tupaia_belangeri
ENSPPAG00000036238	-	100	96.401	ENSTTRG00000005700	RBFOX1	93	96.401	Tursiops_truncatus
ENSPPAG00000036238	-	100	96.570	ENSUAMG00000024633	RBFOX1	100	96.570	Ursus_americanus
ENSPPAG00000036238	-	100	87.335	ENSUMAG00000003579	RBFOX1	100	87.599	Ursus_maritimus
ENSPPAG00000036238	-	79	96.753	ENSVPAG00000001284	RBFOX1	74	96.753	Vicugna_pacos
ENSPPAG00000036238	-	100	98.969	ENSVVUG00000017311	RBFOX1	98	98.378	Vulpes_vulpes